Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_C08
(869 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 1e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 41 2e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 40 2e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 40 2e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 40 4e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 40 4e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 37 3e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 34 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.014
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 29 0.056
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 28 0.097
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 4.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.8
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 6.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 6.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.4
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 117 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEW 296
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 297 -GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 419
G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 117 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEW 296
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 297 -GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 419
G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 47.6 bits (108), Expect = 1e-07
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 132 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 419
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 132 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 419
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 132 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 419
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 132 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 419
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 132 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 419
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 132 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 419
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +3
Query: 132 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEWGCSTW 311
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 312 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 419
L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 40.7 bits (91), Expect = 2e-05
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 168 IVVNLTLHLRHA---NIRESESTVRIQANLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 335
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 336 RPDVVLLNAA 365
PD+VL N A
Sbjct: 104 LPDIVLYNNA 113
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 40.3 bits (90), Expect = 2e-05
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 165 KIVVNLTL-HLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 338
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 339 PDVVLLNAAATTAGDYALR 395
PD+VL N A G+Y +R
Sbjct: 111 PDIVLFNNA---DGNYEVR 126
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 40.3 bits (90), Expect = 2e-05
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 246 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 365
++ +W D +L W+ E+G L V S+ +WRPD+VL N A
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 40.3 bits (90), Expect = 2e-05
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 135 RTIGTPPPXSKIVVNLTL-HLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEWG-CST 308
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 309 WLVSSERLWRPDVVLLNAA 365
V SE +W PD+VL N A
Sbjct: 95 LHVPSEHIWLPDIVLYNNA 113
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 168 IVVNLTLHLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 344
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 345 VVLLNAA 365
+L N A
Sbjct: 92 TILYNNA 98
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 165 KIVVNLTL-HLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 338
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 339 PDVVLLNAA 365
PD+VL N A
Sbjct: 113 PDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 165 KIVVNLTL-HLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 338
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 339 PDVVLLNAA 365
PD+VL N A
Sbjct: 113 PDIVLYNNA 121
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 39.5 bits (88), Expect = 4e-05
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 150 PPPXSKIVVNLTLHLRHANIRESESTVRIQANLQMNWIDKRLSWNAGEW-GCSTWLVSSE 326
P + ++ L ++H N+ E TV L++ W L+W + E+ ++ V S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 327 RLWRPDVVL 353
+W PD+V+
Sbjct: 114 EIWVPDIVM 122
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 39.5 bits (88), Expect = 4e-05
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 246 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 365
++ W D +L WN E+G L V SE +W PD+VL N A
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 36.7 bits (81), Expect = 3e-04
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Frame = +3
Query: 150 PPPXSKIVVNLTLHL--RHANIRESESTVRIQANLQMNWIDKRLSWNAGEW-GCSTWLVS 320
P +I N+T+ L + + S + + + + + W D LSW ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 321 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXXKALGH 446
S+ +W PD+ + N+ T G V ++GSVS ++ H
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKH 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.001
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 207 IRESESTVRIQANLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 359
I E + T + + +W+D+RL++ G+ + + R+W+PD N
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 21.8 bits (44), Expect = 8.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 436 RLDXSTPISMQLDNWPNDMQTC 501
RL M L+N+P D Q C
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRC 144
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.014
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 171 VVNLTLHLRH-ANIRESESTVRIQANLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 341
+V + L +R A I + + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 342 DVVLLN 359
D+ N
Sbjct: 119 DLFFSN 124
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 29.1 bits (62), Expect = 0.056
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +3
Query: 207 IRESESTVRIQANLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 359
+ E + + + +W D RLS+ S + ER+WRPD N
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
Score = 22.2 bits (45), Expect = 6.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 436 RLDXSTPISMQLDNWPNDMQTC 501
RL M+L N+P D Q+C
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSC 176
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 28.3 bits (60), Expect = 0.097
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 171 VVNLTLHLRH-ANIRESESTVRIQANLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 341
VV + + +R + I + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 VVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 342 DVVLLN 359
D+ N
Sbjct: 119 DLFFSN 124
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 4.8
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +3
Query: 168 IVVNLTLHLRHAN-IRESESTVRIQANLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 329
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 330 LWRPDVVLLNA 362
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 311 PSAAAPLPCVPTQS 270
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGP 124
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGP 124
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGP 124
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGP 124
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGP 124
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGP 124
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGP 124
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGP 373
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGP 373
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGP 373
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGP 373
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGP 373
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGP 373
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 351 PIMVRPWVPMRGQVPGSRHIGP 372
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 336 PIMVRPWVPMRGQVPGSRHIGP 357
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 701 PXATRPWLPXXVXXPGGXGXSP 766
P RPW+P PG P
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGP 373
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,704
Number of Sequences: 438
Number of extensions: 3983
Number of successful extensions: 76
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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