Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_C06
(839 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 89 3e-18
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 70 2e-12
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 58 7e-09
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 47 2e-05
03_03_0164 - 14979364-14979479,14979613-14980102 32 0.65
12_02_0786 + 23139854-23139901,23140054-23140122,23140531-231405... 31 1.1
01_06_1495 + 37769982-37771496 31 1.5
09_06_0230 + 21717225-21717301,21717888-21717972,21718045-217181... 30 2.0
03_02_0124 - 5749183-5749773,5750628-5751160,5751191-5753035,575... 30 2.0
01_06_0732 + 31561149-31561770,31561908-31561999 30 2.0
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702... 30 2.6
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 30 2.6
02_02_0120 + 6984482-6984643,6984748-6984797,6984936-6984996,698... 30 2.6
08_02_0058 + 11773402-11773482,11773513-11774197,11774245-11774714 29 3.5
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368... 29 3.5
05_06_0189 + 26257587-26257791,26257962-26258003,26258064-262584... 29 3.5
01_07_0015 + 40469839-40470672,40471185-40471229,40471255-40471266 29 3.5
11_06_0188 + 21036465-21036627,21036735-21036883,21037369-210374... 29 4.6
06_01_1037 - 8140602-8140782,8141489-8141545,8141649-8141845,814... 29 6.1
04_04_0046 + 22344503-22345075 29 6.1
12_02_1219 + 27096477-27096590,27096704-27097078 28 8.1
08_02_1094 + 24275719-24277029 28 8.1
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 89.4 bits (212), Expect = 3e-18
Identities = 44/81 (54%), Positives = 54/81 (66%)
Frame = +3
Query: 594 WLHDQIDSGEQITEVQASDKLLEFRRDEKDFMGPSFGTIAGSGANGAIIHYSPDREGXQT 773
WL Q+ +TEVQ ++KLLEFR+ + F+ SF TI+G GANGAIIHY P E +
Sbjct: 449 WLEGQVRESVPLTEVQVAEKLLEFRQKQDGFIDTSFDTISGYGANGAIIHYRPTPESCSS 508
Query: 774 VIERDPMFLLDSGGQYRDGTT 836
V D +FLLDSG QY DGTT
Sbjct: 509 V-GSDNLFLLDSGAQYIDGTT 528
Score = 71.3 bits (167), Expect = 9e-13
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 23/166 (13%)
Frame = +1
Query: 133 LTALDDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLREEGVDSV 312
++ LD++A+ LN+RGSD+ +PVF+SYLIV +T L+ + ++ V +HL + G V
Sbjct: 276 ISLLDEVAWLLNMRGSDVPNSPVFYSYLIVEDTAATLFVDNNKVSEDVLEHLEKAG---V 332
Query: 313 EGKPYGDILEGLKEMARE-----LSESGDGRHVIWLSNDANEAIHR-------------- 435
+ KPY IL ++ +A L S ++ + + E +
Sbjct: 333 KLKPYEAILSDVERLAENGAKLWLDSSSINAAIVNVFRSSCERYVKKRGKAGRQIGKESS 392
Query: 436 ----AASGSDVLKRPIDLISEVSPVKLAKLVKNEIELQGFRNCHIK 561
A S V ++ + +VSP LAK VKNE E++G ++ H++
Sbjct: 393 QGDPATGSSGVQNGTVNALYKVSPATLAKAVKNEAEVEGMKSSHLR 438
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/71 (47%), Positives = 45/71 (63%)
Frame = +3
Query: 624 QITEVQASDKLLEFRRDEKDFMGPSFGTIAGSGANGAIIHYSPDREGXQTVIERDPMFLL 803
++TEV SDKL FR ++ F G SF TI+ G N A+IHYSP+ ++ D ++L
Sbjct: 434 KLTEVSVSDKLEGFRASKEHFKGLSFPTISSVGPNAAVIHYSPEASSC-AELDADKIYLC 492
Query: 804 DSGGQYRDGTT 836
DSG QY DGTT
Sbjct: 493 DSGAQYLDGTT 503
Score = 58.4 bits (135), Expect = 7e-09
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Frame = +1
Query: 133 LTALDDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLREEGVDSV 312
+ ALD++A+ N+RG D+ Y+PV SY IV + Y ++ V +++ + G+D
Sbjct: 248 IAALDEVAWLYNIRGDDVHYSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYMTDNGIDI- 306
Query: 313 EGKPYGDILEGLKEMARELSESGDGRHVIWLSNDANEAIHRAASGSD---VLKRPID--- 474
K Y + +A + + ND NE + L +D
Sbjct: 307 --KDYNMVQSDASLLASGQLKGSAVNGSSYGENDMNENSKVWIDSNSCCLALYSKLDQDQ 364
Query: 475 LISEVSPVKLAKLVKNEIELQGFRNCHIK 561
++ SP+ L K VKN +EL G R HI+
Sbjct: 365 VLMLQSPIALPKAVKNPVELDGLRKAHIR 393
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 48 VRYTGRTAGEKIAELRRKMAEKKASAL 128
V Y GRT EK+ ELR K +KA +
Sbjct: 220 VEYAGRTVTEKLKELREKFLHEKARGI 246
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 58.4 bits (135), Expect = 7e-09
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Frame = +1
Query: 133 LTALDDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLREEGVD-- 306
+ ALD++A+ N+RG+D+ Y+PV SY IV + Y ++ V +++ E G+D
Sbjct: 198 IAALDEVAWLYNIRGNDVHYSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYMTENGIDIK 257
Query: 307 --SVEGKPYGDILEG-LKEMARELSESGDG----RHVIWLSNDANEAIHRAASGSDVLKR 465
++ + G LK A S G+ +W+ D+N S D
Sbjct: 258 DYNMVQSDASLLASGQLKGSAVNGSSHGENDMNENSKVWI--DSNSCCLALYSKLD---- 311
Query: 466 PIDLISEVSPVKLAKLVKNEIELQGFRNCHIK 561
++ SP+ L K VKN +EL G R HI+
Sbjct: 312 QYQVLMLQSPIALPKAVKNPVELDGLRKAHIR 343
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 47.2 bits (107), Expect = 2e-05
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Frame = +1
Query: 133 LTALDDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLREEGV--- 303
+ ALD++A+ N+RG+D+ Y+PV SY IV + Y + ++ H E V
Sbjct: 231 IAALDEVAWLYNIRGNDVHYSPVVHSYSIVTLHSAFFYVDNRKVSVENRSHDFEGHVVNC 290
Query: 304 -------------DSVEGKPYGDILEGLKEMA-RELSESGDGRH---VIWLSNDANEAIH 432
+ ++ + Y + LK A S G+G + I + N A++
Sbjct: 291 DSYLVKVQSYMSENGIDIRDYNMVQSDLKGSAVNGSSHEGNGMNDNSKILIDNSCCLALY 350
Query: 433 RAASGSDVLKRPIDLISEVSPVKLAKLVKNEIELQGFRNCHIK 561
VL ++ SPV L+K VKN +EL G R HI+
Sbjct: 351 SKLDEDQVL-----ILQ--SPVALSKAVKNPVELDGLRKAHIR 386
>03_03_0164 - 14979364-14979479,14979613-14980102
Length = 201
Score = 31.9 bits (69), Expect = 0.65
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +3
Query: 273 RDGSPEGGGRGQCRGQTLRGHFGGLKGNGARTVGERRRETR 395
R GS GGG G+ RGQ + GG+ G+G RRR+ R
Sbjct: 51 RRGSGVGGGNGKARGQWQQRRGGGV-GSGNGEARGRRRQRR 90
>12_02_0786 +
23139854-23139901,23140054-23140122,23140531-23140544,
23140603-23140675,23140875-23140979,23141817-23142080,
23142159-23142251,23142381-23142587,23143155-23143258,
23143436-23143502,23143576-23143683,23143943-23144033,
23144123-23144193,23144421-23144549,23144659-23144766
Length = 516
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 696 SFGTIAGSGANGAIIHYSPDREGXQTVIERDPMFLLDSGGQY 821
+F + G GANG++IHYS + +G ++ + L+D G +Y
Sbjct: 326 AFHPVVGGGANGSVIHYSRN-DGR---VKAGELLLMDVGCEY 363
>01_06_1495 + 37769982-37771496
Length = 504
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 838 SVVPSLYCPPESRRNMGSLSITVCXPSLSGL*CIIAPFAPLPAIVPN 698
S++PS+ P S + LS T+C P + G C + P A A +P+
Sbjct: 139 SLLPSMKNPISSNPALRHLSNTLCAPMILGTNCNLRPSANDEATIPD 185
>09_06_0230 +
21717225-21717301,21717888-21717972,21718045-21718165,
21718244-21718368,21718940-21718984,21719082-21719345,
21720067-21720111,21720182-21720212,21721644-21721693,
21722433-21724310,21724406-21724564,21724821-21724939,
21726917-21727059,21727670-21727735,21728184-21728317,
21728454-21728591,21728927-21729186,21729295-21729406,
21730727-21730909
Length = 1344
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Frame = +1
Query: 337 LEGLKEMARELSESGDGRHVIWLSNDANEAIHRAASGSDVLKR----PIDLI-SEVSPVK 501
L+GL ++ ++ + DGR ++ L++D+ A H+ S L++ + L+ S +SP
Sbjct: 462 LDGLVSLSGQMLNAQDGRSLVSLTHDSLAAAHQLTSADVFLQKAEFQQLQLLCSSISPTP 521
Query: 502 LAKLVKNEIELQGFRNCHIKGRYSRGQVLQGGSTI 606
+VK+ F+ G+ G +L G I
Sbjct: 522 EPSVVKS----ANFQGSLWTGKQLFGMLLPSGMNI 552
>03_02_0124 -
5749183-5749773,5750628-5751160,5751191-5753035,
5753632-5753820,5753911-5754013,5754087-5754269,
5754392-5754484,5755031-5755219,5756133-5756327
Length = 1306
Score = 30.3 bits (65), Expect = 2.0
Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = +3
Query: 42 LHVRYTGRTAGEKIAELR-RKMAEKKASALXSNGLRRYCLHVKSTRLRHRI*SGLLFVPD 218
LH R + RT + +K+ A+ S L R R++ LFV D
Sbjct: 432 LHPRNSLRTVNPSDSHAHHQKVHVTHANTKVSEQLERNSSDGSMQNERNKTVPNSLFVND 491
Query: 219 RDGDQCCSILGRRSTAPLRDGSPEGGGRGQCRG 317
R+G RS+ L D S EG RG+ G
Sbjct: 492 RNGQNRSRFARTRSSPELTDPSVEGYSRGRRTG 524
>01_06_0732 + 31561149-31561770,31561908-31561999
Length = 237
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Frame = +3
Query: 246 LGRRSTAPLRDGSPE----GGGRGQCRGQTLRGHFGG---LKGNGARTVGERRRETRD 398
LG R+TAP+ G P GGG G RG RG G +G R G+ E RD
Sbjct: 87 LGARTTAPVVAGHPAGRKGGGGGGGGRGAAARGGAAGGRHYRGVRRRPWGKYAAEIRD 144
>12_02_0529 -
20067974-20068588,20069982-20070048,20070156-20070264,
20070357-20070402,20070501-20070636,20070745-20070866,
20070944-20071306,20071914-20072043,20072129-20072202,
20072620-20072709,20072836-20072875,20073047-20073117,
20074248-20074277
Length = 630
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 252 RRSTAPLRDGSPEGGGRGQCRGQ-TLRGHFGGLKGNGARTVGERRRET 392
RRS AP R GGG G GQ R +G GA+ ERRR T
Sbjct: 444 RRSVAPERRRRTSGGGGG---GQGAWRQSAAEERGGGAKAAEERRRRT 488
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +3
Query: 219 RDGDQCCSILGRRSTAPLRDGSPEGGGRGQCRGQTLRGHFGGLKGNGARTVGERRR 386
R+G + G R P R G GGG+G RG T G G ++G VG R
Sbjct: 41 RNGPRGGRFPGGRGVEPRRGGDVLGGGQGGGRG-TTAGAGGLVRGGSELAVGAELR 95
>02_02_0120 +
6984482-6984643,6984748-6984797,6984936-6984996,
6985574-6985669,6985754-6985903,6986208-6986339,
6986641-6986768,6987285-6987327,6987935-6988018,
6989049-6989090,6989264-6989334,6989621-6989674,
6989789-6989894,6990038-6990106,6990824-6990967,
6992038-6992113,6992295-6992353
Length = 508
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 696 SFGTIAGSGANGAIIHYSPDREGXQTVIERDPMFLLDSGGQY 821
S+ I +G N +++HY + M L+D GG+Y
Sbjct: 249 SYTCICATGENSSVLHYGHAAAPNDRTLNDGDMALMDMGGEY 290
>08_02_0058 + 11773402-11773482,11773513-11774197,11774245-11774714
Length = 411
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 240 SILGRRSTAPL--RDGSPEGGGRGQCRGQTLRGHFGGLKGNGARTVGERRR 386
+I+G R PL R+ GG C G + G G+K N R G+RRR
Sbjct: 111 TIMGVRGRVPLPEREREMAAGGSVCCVG-SFEGWLVGVKANKGRYFGDRRR 160
>05_07_0310 +
29135875-29136052,29136206-29136617,29136723-29136867,
29137944-29138102,29138183-29138242,29138349-29138546
Length = 383
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 291 GGGRGQCRGQTLRGHF-GGLKGNGAR 365
G GRG+ RG+ RG F GG GNG R
Sbjct: 338 GRGRGRGRGRGDRGGFYGGYNGNGGR 363
>05_06_0189 +
26257587-26257791,26257962-26258003,26258064-26258436,
26258515-26258656,26259356-26259514,26259599-26259661,
26259992-26260180
Length = 390
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 276 DGSPEGGGRGQCRGQTLRGHFGGLKGNGARTVGERRRETRD 398
+G GGRG+ RG+ RG F G G G R+ E +D
Sbjct: 340 EGERYYGGRGRGRGRGDRGGFRGGYGEGHRSAAPPAPEIKD 380
>01_07_0015 + 40469839-40470672,40471185-40471229,40471255-40471266
Length = 296
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 352 EMARELSESGDGRHVIWLSNDANEAIHRAASGSDVLKRPIDLISEVSP 495
++ REL DG V WL A AI AA+G+ + P ++ V+P
Sbjct: 113 QLTRELGHKSDGETVQWLLQQAEPAI-VAATGTGTI--PASALASVAP 157
>11_06_0188 +
21036465-21036627,21036735-21036883,21037369-21037484,
21037939-21038101
Length = 196
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = +3
Query: 267 PLRDGSPEGGGRGQCRGQTLRGHFGGLKGNGARTVGERR 383
P G +GGGRG RG RG F G G G R G R
Sbjct: 140 PQPKGQSQGGGRGGGRGGG-RGGFRGRGGGGFRGRGAPR 177
>06_01_1037 -
8140602-8140782,8141489-8141545,8141649-8141845,
8143174-8143242,8143347-8143490,8144055-8144225
Length = 272
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 279 GSPEGGGRGQCRGQTLRGHFGGLKGNGARTVGERR--RETRDLV 404
G +GGGRG RG R +G +G GA T R +T+D+V
Sbjct: 25 GRSQGGGRG--RGDGQRFSYGSGRGRGAGTFRGRGSFNKTKDIV 66
>04_04_0046 + 22344503-22345075
Length = 190
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 708 IAGSGANGAIIHYSPDREGXQ-TVIERDPMFLLDSGGQYR 824
+AG G G ++ + R+G + TV ERD M + GQYR
Sbjct: 82 VAGGGIGGLVLALAARRKGYEVTVFERD-MSAVRGEGQYR 120
>12_02_1219 + 27096477-27096590,27096704-27097078
Length = 162
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +3
Query: 273 RDGSPEGGGRGQCRGQTLRGHFGGLKGNGARTVGERR 383
R G GGG GQ G G GG G G G+RR
Sbjct: 88 RSGGGGGGGYGQRGGGGGYGGGGGYGGGGGGGYGQRR 124
>08_02_1094 + 24275719-24277029
Length = 436
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 532 LQGFRNCHIKGRYSRGQVLQG-GSTIKLTAASRSQRCRLR 648
L+GF H G + RG++++G ++IK AA++ R LR
Sbjct: 74 LEGFVPAHFIGWHLRGEIVRGCCASIKKGAAAKEARLALR 113
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,997,614
Number of Sequences: 37544
Number of extensions: 570012
Number of successful extensions: 2146
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2128
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -