Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_C06
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039716-4|AAB96739.1| 616|Caenorhabditis elegans Aminopeptidas... 73 3e-13
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 33 0.33
AF043701-7|AAK18972.1| 498|Caenorhabditis elegans Hypothetical ... 30 1.8
AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophi... 30 1.8
U29380-12|AAR12986.1| 485|Caenorhabditis elegans Hypothetical p... 30 2.4
U29380-11|AAR12987.1| 501|Caenorhabditis elegans Hypothetical p... 30 2.4
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 30 2.4
AF098992-8|AAC67454.2| 239|Caenorhabditis elegans Hypothetical ... 29 3.1
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 29 4.1
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 29 4.1
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical pr... 28 7.2
>AF039716-4|AAB96739.1| 616|Caenorhabditis elegans Aminopeptidase p
protein 1 protein.
Length = 616
Score = 72.9 bits (171), Expect = 3e-13
Identities = 45/142 (31%), Positives = 77/142 (54%)
Frame = +1
Query: 136 TALDDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLREEGVDSVE 315
T LDD+ + LN+RGSDI YNP+ +SYL V + ++ + +L H + V S+
Sbjct: 202 TLLDDVMWLLNIRGSDIPYNPLAYSYLFVAMREIHVFIDNEKLDEKSRAHFHKSNV-SIH 260
Query: 316 GKPYGDILEGLKEMARELSESGDGRHVIWLSNDANEAIHRAASGSDVLKRPIDLISEVSP 495
PYG++ + + E+ H+++L+ + N AI GS + + + + + S
Sbjct: 261 --PYGEVYSWISNWLK-AKEASKEPHMVYLTPETNYAI-----GSIIGEE--NSMVDTSL 310
Query: 496 VKLAKLVKNEIELQGFRNCHIK 561
V+ AK KN+ E+QG RN H++
Sbjct: 311 VQTAKATKNDHEMQGMRNSHLR 332
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +3
Query: 594 WLHDQIDSGEQITEVQASDKLLEFRRDEKDFMGPSFGTIAGSGANGAIIHYSPDREGXQT 773
WL ++ SG++ TE++ +DK+ R + ++ SF TI+ G + A+ HY P E
Sbjct: 343 WLEKELLSGKRYTEIELADKIDHLRSLQDKYVTLSFDTISAVGDHAALPHYKPLGESGNR 402
Query: 774 VIERDPMFLLDSGGQYRDGTT 836
+ +FLLDSG Y DGTT
Sbjct: 403 KAAANQVFLLDSGAHYGDGTT 423
>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
protein Y45G5AM.2 protein.
Length = 1061
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/38 (47%), Positives = 30/38 (78%)
Frame = +1
Query: 133 LTALDDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLY 246
+T+L+DI + LN+RG+D+ YNPV +SYL + ++V L+
Sbjct: 648 ITSLEDIMWLLNIRGNDLPYNPVTYSYLFITMSDVRLF 685
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +3
Query: 246 LGRRSTAPLRDGSPEGGGRGQCRGQTLRGHFGGLKGNGARTVGERR 383
LGR R G+ GG RG RG + RG GG +G G G RR
Sbjct: 783 LGRGGAGGARGGA-RGGARGGARGGSSRGARGGARGGG--KFGNRR 825
>AF043701-7|AAK18972.1| 498|Caenorhabditis elegans Hypothetical
protein K12C11.1 protein.
Length = 498
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 696 SFGTIAGSGANGAIIHYSPDREGXQTVIERDPMFLLDSGGQY 821
++ IA +G NG+++HY I+ M L D G +Y
Sbjct: 237 AYTCIAATGCNGSVLHYGHANAPNDKFIKDGDMCLFDMGPEY 278
>AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophila
vasa intronic gene)ortholog protein 1, isoform a
protein.
Length = 378
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 255 RSTAPLRDGSPEGGGRGQCRGQTLRGHFGG 344
RS P R G P GGGRG RG +G GG
Sbjct: 331 RSERPQR-GGPRGGGRGGGRGGQRQGGHGG 359
>U29380-12|AAR12986.1| 485|Caenorhabditis elegans Hypothetical
protein ZK546.2a protein.
Length = 485
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -1
Query: 530 SISFLTNLASFTGDTSDIKSIGRFRTSDPEAALWIASLASLD--NQITCLPSPLSDSSRA 357
SI++LT L F G S +K++ R L I SLA L+ N + L D S+
Sbjct: 49 SINYLTQLPPFIGSMSHLKNLNLSRNQLESLPLEINSLACLEVLNVSQNKLTELPDLSQC 108
Query: 356 ISFK 345
+S K
Sbjct: 109 VSLK 112
>U29380-11|AAR12987.1| 501|Caenorhabditis elegans Hypothetical
protein ZK546.2c protein.
Length = 501
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -1
Query: 530 SISFLTNLASFTGDTSDIKSIGRFRTSDPEAALWIASLASLD--NQITCLPSPLSDSSRA 357
SI++LT L F G S +K++ R L I SLA L+ N + L D S+
Sbjct: 49 SINYLTQLPPFIGSMSHLKNLNLSRNQLESLPLEINSLACLEVLNVSQNKLTELPDLSQC 108
Query: 356 ISFK 345
+S K
Sbjct: 109 VSLK 112
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 273 RDGSPEGGGRGQCRGQTLRGHFGGLKGNGAR-TVGERRRETR 395
R +GGGRG G+ RG GG G G R G+RR + R
Sbjct: 323 RKNQRQGGGRGGRGGRGGRGGRGGRGGRGGRGGRGDRRGDKR 364
>AF098992-8|AAC67454.2| 239|Caenorhabditis elegans Hypothetical
protein F53C3.3 protein.
Length = 239
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 237 CSILGRRSTAPLRDGSPEGGGRGQCRGQTL-RGHFGGLKGNGART 368
CS+L R A R G GGG G RG RG G + GAR+
Sbjct: 12 CSLLSRSIDA--RGGGGRGGGGGGARGGVGGRGGGGSFRSGGARS 54
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +3
Query: 249 GRRSTAPLR---DGSPEGGGRGQCRGQTLRGHFGGLKGNGARTVGERRRE 389
G ST R G G GRG RG RGH GG G G R + +R+
Sbjct: 823 GGNSTGSYRGRSSGGSGGSGRGGGRGGYSRGHGGG-SGGGQRGNYQNKRK 871
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +3
Query: 543 P*LPHQGTV*PWSGSSGWLHDQIDSGEQITEVQASDKLLEFRRDEK-------DFMGPS 698
P P T P + +GW D+ + GE+I + A + + R +K DF+GPS
Sbjct: 310 PKRPAMETPVPVAADNGWEADEEEEGEEIVDRDADIEKCKLRNKKKMENLHIADFLGPS 368
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +3
Query: 543 P*LPHQGTV*PWSGSSGWLHDQIDSGEQITEVQASDKLLEFRRDEK-------DFMGPS 698
P P T P + +GW D+ + GE+I + A + + R +K DF+GPS
Sbjct: 310 PKRPAMETPVPVAADNGWEADEEEEGEEIVDRDADIEKCKLRNKKKMENLHIADFLGPS 368
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/42 (45%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +3
Query: 249 GRRSTAPLR---DGSPEGGGRGQCRGQTLRGHFGGLKGNGAR 365
G ST R G G GRG RG RGH GG G G R
Sbjct: 820 GGNSTGSYRGRSSGGSGGSGRGGGRGGYSRGHGGG-SGGGQR 860
>Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical protein
F23B12.7 protein.
Length = 953
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 249 GRRSTAPLRDGSPEGGGRGQCRGQTLRGHFGGLKGNGARTVGER 380
G + L D + G RG+ +G RG GG K GA+ +R
Sbjct: 910 GDKFAEMLEDLEEDDGKRGKKKGGKKRGSTGGFKRGGAKKFRKR 953
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,038,594
Number of Sequences: 27780
Number of extensions: 398228
Number of successful extensions: 1238
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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