Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_C01
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 94 1e-19
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 62 5e-10
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 58 9e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 52 4e-07
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 51 1e-06
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 51 1e-06
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 51 1e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 50 3e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 49 4e-06
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 48 7e-06
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 48 7e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 47 2e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 47 2e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 47 2e-05
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 44 2e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 44 2e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 2e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 3e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 3e-04
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 42 8e-04
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 41 0.001
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 41 0.001
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 41 0.001
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 41 0.001
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 41 0.001
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 40 0.003
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.007
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.007
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 38 0.007
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 38 0.010
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 38 0.010
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 38 0.010
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 36 0.030
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 34 0.16
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 34 0.16
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 34 0.16
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 34 0.16
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 30 0.17
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.65
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 32 0.65
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 30 2.0
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 29 3.5
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 3.5
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/71 (57%), Positives = 55/71 (77%)
Frame = +2
Query: 368 KKPVKLFVNSNKEVAFNLRQEFVRIRKERECDREAMLAALVCRTFRDRTVVFVXTKRXAH 547
+KPVK+F+N N + A LRQEF+RIR RE DREAM+AALV RTF+ T+VFV TK+
Sbjct: 372 QKPVKIFINENTDTALKLRQEFIRIRAGRETDREAMVAALVTRTFQTNTIVFVRTKKDCQ 431
Query: 548 RLHVMLGMLGV 580
R+ ++LG+LG+
Sbjct: 432 RMQILLGLLGI 442
Score = 75.8 bits (178), Expect = 4e-14
Identities = 35/60 (58%), Positives = 49/60 (81%)
Frame = +1
Query: 205 SIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLXETRQI 384
+ +VLVLDEADRML+E F +QM E+IR C+ RQT+LFSATM+EE+ +LA++SL + +I
Sbjct: 318 NFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSLQKPVKI 377
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +3
Query: 96 DVKYQESVLRQNPDIVIATPGRLIDHIRNTPS 191
D+K QE+ LR PD+V+ATPGRLIDH+ N+PS
Sbjct: 258 DLKAQEAALRSGPDVVVATPGRLIDHLHNSPS 289
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 62.1 bits (144), Expect = 5e-10
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +1
Query: 205 SIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAV 360
S++VLVLDEADRMLD F++Q+ II +RQT+LFSAT + VKDL V
Sbjct: 222 SLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNVKDLCRV 273
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 58.0 bits (134), Expect = 9e-09
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 217 LVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAA 357
LVLDEADRMLD F Q+K+II Q P RQT++FSAT +EV+ LA+
Sbjct: 280 LVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALAS 326
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 120 LRQNPDIVIATPGRLIDHIRN 182
L + DIV+ATPGRL+D + N
Sbjct: 249 LERGVDIVVATPGRLLDFLDN 269
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/58 (41%), Positives = 42/58 (72%)
Frame = +1
Query: 193 FGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSL 366
F + +++ L++DEADR+LD F +M++++R +RQ+MLFSAT S +V +L ++L
Sbjct: 211 FLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVKLAL 268
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 108 QESVLRQNPDIVIATPGRLIDHIRNT 185
++ L + I++ATPGRL+DH++NT
Sbjct: 183 EKDKLAKGVSILVATPGRLLDHLQNT 208
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +1
Query: 208 IEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVS 363
I+ VLDEADRML+ + +Q+K I S KRQT+L SAT++ + L VS
Sbjct: 236 IQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVS 287
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 105 YQESVLRQNPDIVIATPGRLIDHIRNTPSVRA 200
+Q L + P +V+ATPGRL D I + P A
Sbjct: 199 HQARELSERPHVVVATPGRLADLIESDPDTIA 230
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +1
Query: 208 IEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVS 363
I+ VLDEADRML+ + +Q+K I S KRQT+L SAT++ + L VS
Sbjct: 236 IQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVS 287
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 105 YQESVLRQNPDIVIATPGRLIDHIRNTPSVRA 200
+Q L + P +V+ATPGRL D I + P A
Sbjct: 199 HQARELSERPHVVVATPGRLADLIESDPDTIA 230
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLXETR 378
L + LVLDEADRM D+ F Q+ +++ P +QT+LFSAT ++ LA L +
Sbjct: 452 LRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPV 511
Query: 379 QIV 387
+I+
Sbjct: 512 EIL 514
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/64 (35%), Positives = 43/64 (67%)
Frame = +1
Query: 193 FGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLXE 372
F L +++ L++DEADR+L+ F ++ +I++ +R+T LFSATM+++V L SL +
Sbjct: 183 FNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASLRD 242
Query: 373 TRQI 384
++
Sbjct: 243 PARV 246
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 96 DVKYQESVLRQNPDIVIATPGRLIDHIRNT 185
D+ Q L + P I++ATPGRL+DH+ NT
Sbjct: 151 DMAAQAMALARRPHIIVATPGRLVDHLENT 180
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +2
Query: 335 RKSRTWRRFPXKKPVKLFVNSNKEVAFNLRQEFVRIRKERECDREAMLAALVCRTFRDRT 514
+K R + P ++ V+S + NL+Q ++ + + +E L L+ +
Sbjct: 230 KKVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVPNKY---KETYLVYLLNEHAGNSA 286
Query: 515 VVFVXTKRXAHRLHVMLGMLGVXAXXL 595
+VF T ++ VML LG+ A L
Sbjct: 287 IVFCATCATTMQIAVMLRQLGMQAVPL 313
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK-RQTMLFSATMSEEVKDLAAVSLXET 375
+ ++++LV+DEADR + F + M+EI+ C PK R+T LFSAT +E DL L
Sbjct: 157 MRTLQLLVIDEADRFNEIQFEDHMREIL-SCIPKQRRTGLFSATQVKEEDDLMVFGLRNA 215
Query: 376 RQI 384
+Q+
Sbjct: 216 KQV 218
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +1
Query: 217 LVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLXETRQIVR 390
LV DEADRM D F Q+K I P RQ ++FSAT ++V+ LA +L + +IV+
Sbjct: 417 LVFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQ 474
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +1
Query: 217 LVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSL 366
LVLDEADRMLD F +++K I +RQT+LFSATM +++ A +L
Sbjct: 350 LVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSAL 399
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 48.4 bits (110), Expect = 7e-06
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +1
Query: 205 SIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLXETRQI 384
+I++LVLDEAD ML++ F EQ+ +I R P Q +L SAT+ E+ ++ + + + +I
Sbjct: 168 AIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRI 227
Query: 385 V 387
+
Sbjct: 228 L 228
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 48.4 bits (110), Expect = 7e-06
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +1
Query: 205 SIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLXETRQI 384
+I++LVLDEAD ML++ F EQ+ +I R P Q +L SAT+ E+ ++ + + + +I
Sbjct: 168 AIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRI 227
Query: 385 V 387
+
Sbjct: 228 L 228
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLXE 372
L ++ +V DEADR+ + F +Q+ E +++ RQT+LFSAT+ + + D A L +
Sbjct: 165 LSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTD 222
Score = 32.7 bits (71), Expect = 0.37
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 99 VKYQESVLRQNPDIVIATPGRLI 167
++ Q S + +NPDI++ATPGRL+
Sbjct: 133 IEEQFSTIHENPDILLATPGRLL 155
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLXE 372
L ++ +V DEADR+ + F +Q+ E +++ RQT+LFSAT+ + + D A L +
Sbjct: 165 LSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTD 222
Score = 32.7 bits (71), Expect = 0.37
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 99 VKYQESVLRQNPDIVIATPGRLI 167
++ Q S + +NPDI++ATPGRL+
Sbjct: 133 IEEQFSTIHENPDILLATPGRLL 155
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +1
Query: 196 GLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP---KRQTMLFSATMSEEVKDLA 354
GL LVLDEADRMLD F Q+++I+ Q P R T +FSAT +E++ LA
Sbjct: 294 GLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLA 349
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +1
Query: 196 GLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP---KRQTMLFSATMSEEVKDLA 354
GL LVLDEADRMLD F Q+++I+ Q P R T +FSAT +E++ LA
Sbjct: 278 GLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLA 333
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +1
Query: 196 GLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP---KRQTMLFSATMSEEVKDLA 354
GL LVLDEADRMLD F Q+++I+ Q P R T +FSAT +E++ LA
Sbjct: 275 GLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLA 330
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +1
Query: 208 IEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 351
I++ VLDEAD ML + F +Q+ E+ R Q +L SATM EV D+
Sbjct: 131 IKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDV 178
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +1
Query: 208 IEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 351
I++ VLDEAD ML F +Q+ E+ R Q +L SATM EV D+
Sbjct: 172 IKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDV 219
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +1
Query: 208 IEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 351
I++ VLDEAD ML F +Q+ E+ R Q +L SATM EV D+
Sbjct: 172 IKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDV 219
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 44.0 bits (99), Expect = 2e-04
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Frame = +1
Query: 196 GLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS-----PKRQTMLFSATMSEEVKDLAAV 360
G+ LVLDEADRMLD F Q+++I+ +C+ +R T +FSAT +E++ LA
Sbjct: 322 GMEGCRYLVLDEADRMLDMGFEPQIRQIV-ECNRMPSKEERITAMFSATFPKEIQLLAQD 380
Query: 361 SLXE 372
L E
Sbjct: 381 FLKE 384
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEY-FAEQMKEIIRQCS----PKRQTMLFSATMSEEVKDLAAVS 363
L LVLDEADRM+D F ++++II + KRQTM+FSAT V++ A
Sbjct: 447 LDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKL 506
Query: 364 LXE 372
L E
Sbjct: 507 LRE 509
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEY-FAEQMKEIIRQCS----PKRQTMLFSATMSEEVKDLAAVS 363
L LVLDEADRM+D F ++++II + KRQTM+FSAT V++ A
Sbjct: 447 LDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKL 506
Query: 364 LXE 372
L E
Sbjct: 507 LRE 509
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 41.5 bits (93), Expect = 8e-04
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 351
L S+ +VLDEADRMLD F ++ I+ + P R L SAT E V+ L
Sbjct: 234 LASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGVRKL 284
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 160 GSSITYGTHPRFGLHSIEVLVLDEADRML-DEYFAEQMKEIIRQCSPKRQTMLFSATMSE 336
G + + L ++ VLDE D+M+ D ++EI++ ++Q M+FSAT+ +
Sbjct: 170 GRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPK 229
Query: 337 EVKDLAAVSLXETRQI 384
E++ + + + R I
Sbjct: 230 ELRTVCKRFMQDVRFI 245
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 208 IEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLXE 372
++ VLDEAD+++DE F + + II RQ +FSAT + +L + L +
Sbjct: 165 VDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFLRD 219
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 208 IEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLXE 372
++ VLDEAD+++DE F + + II RQ +FSAT + +L + L +
Sbjct: 165 VDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFLRD 219
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEY-FAEQMKEIIRQCSPK-RQTMLFSATMSEEVK 345
L ++ +VLDEADRM+D F E++ +II + +QT+LFSA+ SE+++
Sbjct: 888 LSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFSEDLQ 938
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEY-FAEQMKEIIRQCSPK-RQTMLFSATMSEEVK 345
L ++ +VLDEADRM+D F E++ +II + +QT+LFSA+ SE+++
Sbjct: 888 LSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFSEDLQ 938
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 160 GSSITYGTHPRFGLHSIEVLVLDEADRML-DEYFAEQMKEIIRQCSPKRQTMLFSATMSE 336
G + + L ++ VLDE D+M+ D ++EI++ ++Q M+FSAT+ +
Sbjct: 170 GRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPK 229
Query: 337 EVK 345
E++
Sbjct: 230 ELR 232
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEY-FAEQMKEIIRQCS-PK---RQTMLFSATMSEEVKDLAAVS 363
L VLDEADRM+D F ++ I+ S P+ RQT++FSAT + V++ A
Sbjct: 490 LDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAF 549
Query: 364 LXE 372
L E
Sbjct: 550 LRE 552
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEY-FAEQMKEIIRQCS-PK---RQTMLFSATMSEEVKDLAAVS 363
L VLDEADRM+D F ++ I+ S P+ RQT++FSAT + V++ A
Sbjct: 490 LDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAF 549
Query: 364 LXE 372
L E
Sbjct: 550 LRE 552
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEY-FAEQMKEIIRQCS-PK---RQTMLFSATMSEEVKDLAAVS 363
L VLDEADRM+D F ++ I+ S P+ RQT++FSAT + V++ A
Sbjct: 490 LDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAF 549
Query: 364 LXE 372
L E
Sbjct: 550 LRE 552
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEY-FAEQMKEIIR-QCSPK---RQTMLFSATMSEEVKDLAAVS 363
L VLDEADRM+D F + I+ + PK RQT++FSAT + V++ A
Sbjct: 701 LDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNH 760
Query: 364 LXE 372
L E
Sbjct: 761 LKE 763
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEY-FAEQMKEIIR-QCSPK---RQTMLFSATMSEEVKDLAAVS 363
L VLDEADRM+D F + I+ + PK RQT++FSAT + V++ A
Sbjct: 701 LDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNH 760
Query: 364 LXE 372
L E
Sbjct: 761 LKE 763
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEY-FAEQMKEIIR-QCSPK---RQTMLFSATMSEEVKDLAAVS 363
L VLDEADRM+D F + I+ + PK RQT++FSAT + V++ A
Sbjct: 701 LDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNH 760
Query: 364 LXE 372
L E
Sbjct: 761 LKE 763
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 36.3 bits (80), Expect = 0.030
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 211 EVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEV 342
+ LVLDEAD++L + F + +I +RQ ML+SAT V
Sbjct: 187 KTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNTV 230
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Frame = +1
Query: 208 IEVLVLDEADRMLDE-YFAE--QMKEIIRQCSPKR--QTMLFSATMS-EEVKDLAAVSLX 369
++ LV+DE DRM++E YFAE + I + S K QT++FSAT++ + +D+A
Sbjct: 149 LKCLVVDETDRMVEEGYFAELTHILNKIHEESEKEKLQTLVFSATLTFAKAQDVAEEEKK 208
Query: 370 ETRQI 384
+ +++
Sbjct: 209 KAKEL 213
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 99 VKYQESVLRQNPDIVIATPGRL 164
VK + + +Q PDIV+ATPGRL
Sbjct: 109 VKQERIISQQRPDIVVATPGRL 130
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Frame = +1
Query: 208 IEVLVLDEADRMLDE-YFAE--QMKEIIRQCSPKR--QTMLFSATMS-EEVKDLAAVSLX 369
++ LV+DE DRM++E YFAE + I + S K QT++FSAT++ + +D+A
Sbjct: 316 LKCLVVDETDRMVEEGYFAELTHILNKIHEESEKEKLQTLVFSATLTFAKAQDVAEEEKK 375
Query: 370 ETRQI 384
+ +++
Sbjct: 376 KAKEL 380
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 99 VKYQESVLRQNPDIVIATPGRL 164
VK + + +Q PDIV+ATPGRL
Sbjct: 276 VKQERIISQQRPDIVVATPGRL 297
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 208 IEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 351
+ LV+DEAD +L + E+M +I + P Q ++ SAT+ +++ L
Sbjct: 171 VSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTL 218
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 208 IEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 351
+ LV+DEAD +L + E+M +I + P Q ++ SAT+ +++ L
Sbjct: 238 VSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTL 285
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 120 LRQNPDIVIATPGRLIDHIRN 182
LR ++VIATPGRL+D + N
Sbjct: 425 LRMGVEVVIATPGRLLDVLEN 445
Score = 27.5 bits (58), Expect(2) = 0.17
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDEYFAEQMKEII 282
L+ ++LDEADRMLD F +++++
Sbjct: 450 LNQCTYVILDEADRMLDMGFEPDVQKVL 477
Score = 25.0 bits (52), Expect(2) = 0.17
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 301 RQTMLFSATMSEEVKDLA 354
RQT++F+ATMS ++ LA
Sbjct: 509 RQTVMFTATMSSAIERLA 526
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.65
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDE-YFAEQMKEIIRQCSPKR----QTMLFSATMSEEVKDLAAVS 363
L +++ ++LDEAD+M+D F + I+ Q + Q+ FSAT ++ A++
Sbjct: 145 LDNLKTIILDEADKMIDNCAFVPDINWILDQLKEENLENLQSCFFSATYNKNANGTIALT 204
Query: 364 LXETRQI 384
+ + R +
Sbjct: 205 VLQMRML 211
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.65
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +1
Query: 199 LHSIEVLVLDEADRMLDE-YFAEQMKEIIRQCSPKR----QTMLFSATMSEEVKDLAAVS 363
L +++ ++LDEAD+M+D F + I+ Q + Q+ FSAT ++ A++
Sbjct: 245 LDNLKTIILDEADKMIDNCAFGPDINWILDQLKEENLENLQSCFFSATYNKNANGTIALT 304
Query: 364 LXETRQI 384
+ + R +
Sbjct: 305 VLQMRML 311
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 208 IEVLVLDEADRML-DEYFAE---QMKEIIRQCSPKRQTMLFSATMSEEVKDLA 354
I LVLDEAD M+ + F + + ++ S Q+MLFSAT E V + A
Sbjct: 355 IRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFA 407
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 208 IEVLVLDEADRML-DEYFAE---QMKEIIRQCSPKRQTMLFSATMSEEVKDLA 354
I LVLDEAD M+ + F + + ++ S Q+MLFSAT E V + A
Sbjct: 380 IRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFA 432
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 208 IEVLVLDEADRML-DEYFAE---QMKEIIRQCSPKRQTMLFSATMSEEVKDLA 354
I LVLDEAD M+ + F + + ++ S Q+MLFSAT E V + A
Sbjct: 764 IRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFA 816
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +1
Query: 160 GSSITYGTHPRFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEE 339
G + + L ++ VLDE D+M+ + ++ R +Q M+FSAT+ +E
Sbjct: 169 GRMLALARSGKLKLDKVKYFVLDECDKMIGD------ADMRRDVQEIKQVMMFSATLPKE 222
Query: 340 VK 345
++
Sbjct: 223 LR 224
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 470 AMLAALVCRTFRDRTVVFVXTKRXAHRLHVML 565
A+ ALV R+ RTV + K HR HV L
Sbjct: 37 AIFGALVMRSLESRTVTSIEKKTDVHRRHVNL 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,018,259
Number of Sequences: 27780
Number of extensions: 241488
Number of successful extensions: 895
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -