Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_B17
(851 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 51 2e-07
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 48 2e-06
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 45 1e-05
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 43 5e-05
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 42 1e-04
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 40 4e-04
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 40 4e-04
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 40 4e-04
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 40 6e-04
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 37 0.004
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 36 0.010
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 35 0.013
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.017
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 34 0.029
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 33 0.051
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 32 0.090
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 30 0.36
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 27 4.5
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 26 5.9
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 26 5.9
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 26 5.9
SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual 26 5.9
SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70 |Schi... 26 5.9
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 51.2 bits (117), Expect = 2e-07
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 190 FAYDASEADELTIRPGDVIRDVERLPGGWWRGELRGNRGMFPDNFVSLLNEHA 348
+ + +A +L G+VI +E + WWRGEL G G+FP N+V LL + A
Sbjct: 149 YDFPGPDAGDLGFHAGEVIIVLEHVNNDWWRGELNGKEGIFPSNYVRLLEDSA 201
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 48.0 bits (109), Expect = 2e-06
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 190 FAYDASEADELTIRPGDVIRDVERLPGGWWRGELRGNRGMFPDNFV 327
+ Y A E +EL+ ++I +V+ + WW GE G+RG+FP N+V
Sbjct: 809 YDYQAQEDNELSFFEDEIIANVDCVDPNWWEGECHGHRGLFPSNYV 854
Score = 45.6 bits (103), Expect = 9e-06
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Frame = +1
Query: 145 AMETNLSQKVSCTVNFAYDASEADELTIRPGDVIRDVERLPGGWWRGE-LRGNRGMFPDN 321
A E K V + Y E +E+ + + I+ +E + GWW GE +G +G+FP N
Sbjct: 719 ATEHTQPTKTPAIVIYDYSPEEENEIELVENEQIQILEFVDDGWWLGENSKGQQGLFPSN 778
Query: 322 FVSLLNEHATTRS------TGVQGR-CRALYSYQ 402
+V + + T + G G+ +A+Y YQ
Sbjct: 779 YVEITGPNETANNPPAEPQAGGPGKSVKAIYDYQ 812
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +1
Query: 190 FAYDASEADELTIRPGDVIRDVERLPGGWWRGELRG----NRGMFPDNFV 327
+ YDA+ +E++ R GD I ++ GWW G + G NRG FP NFV
Sbjct: 616 YDYDAAIPEEISFRKGDTIAVLKLYEDGWWEGFVVGEDDHNRGQFPSNFV 665
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 43.2 bits (97), Expect = 5e-05
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +1
Query: 151 ETNLSQKVSCTVN-----FAYDASEADELTIRPGDVIRDVERLPGGWWRGELRGNRGMFP 315
E+NL+ + TV+ + + A+E EL+ + GD+I +E + WW+G + G+FP
Sbjct: 206 ESNLATSPASTVSRVRALYDFAATEQGELSFKKGDIILVLESVYKDWWKGSCKNAVGIFP 265
Query: 316 DNFVSLLNE 342
N+V + E
Sbjct: 266 VNYVQRVVE 274
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 190 FAYDASEADELTIRPGDVIRDVERLPG-GWWRGELRGNRGMFPDNFVS 330
+AY A EL+I+ GD+I+ R G GW G L G G FP N+V+
Sbjct: 593 YAYTAQSDMELSIQEGDIIQVTNRNAGNGWSEGILNGVTGQFPANYVT 640
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 39.9 bits (89), Expect = 4e-04
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +1
Query: 193 AYDASEADELTIRPGD---VIRDVERLPGGWWRGE-LRGNRGMFPDNFVSLLNEHATTRS 360
++ +DEL + G +I+ E GWW GE +GNRG+FP + V L+++ + S
Sbjct: 12 SFPGKSSDELPLVEGRKYLLIKMDEEFGDGWWEGEDEQGNRGIFPASHVELISDERSDSS 71
Query: 361 TGVQGR 378
+G+
Sbjct: 72 DSRRGK 77
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 39.9 bits (89), Expect = 4e-04
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Frame = +1
Query: 157 NLSQKVSCTVNFAYDASEADELTIRPGDVIRDVERLPGGWWRGE-------LRGNRGMFP 315
++S + + ++++ +EL ++ GD++ ++ + GWW GE GN GMFP
Sbjct: 419 SISSRKVVRMKYSFEPETENELKLKKGDLLLVLKEIDEGWWVGEKLGEDGVFTGNTGMFP 478
Query: 316 DNF 324
N+
Sbjct: 479 SNY 481
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 39.9 bits (89), Expect = 4e-04
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 190 FAYDASEADELTIRPGDVIRDVERLPGG--WWRGELRGNRGMFPDNFVSL 333
+ Y A A +L+ GD I V R WW G L G +G FP N+V L
Sbjct: 416 YDYAAQAAGDLSFHAGDRIEVVSRTDNQNEWWIGRLNGAQGQFPGNYVQL 465
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 39.5 bits (88), Expect = 6e-04
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +1
Query: 190 FAYDASEADELTIRPGDVIRDVERLPGGWWRGEL----RGNRGMFPDNFV 327
+ Y A +E++ + GD + + GWW GE+ RG+FP NFV
Sbjct: 875 YDYQAQIPEEISFQKGDTLMVLRTQEDGWWDGEIINVPNSKRGLFPSNFV 924
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 190 FAYDASEADELTIRPGDVIRDVERLPG--GWWRGELRGNRGMFPDNFVSL 333
+++ + +L+ + GD+I VER WW G + G+FP N+V L
Sbjct: 380 YSFAGEQPGDLSFQKGDIIDIVERSGSHDDWWTGRIGYREGIFPANYVKL 429
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 35.5 bits (78), Expect = 0.010
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 151 ETNLSQKVSCTVNFAYDASEADELTIRPG-DVIRDVERLPGGWWRGELRGNRGMFPDNFV 327
+++ QK+ TV + + A ADELT++ V+ + WW+ + G G+ P NF+
Sbjct: 505 DSSAGQKMG-TVLYDFIAEAADELTVKANMRVVIVNDTASSDWWKCSVDGKEGVVPSNFI 563
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 35.1 bits (77), Expect = 0.013
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 214 DELTIRPGDVIRDVERLPGGWWRGELRGNRGMFPDNFVS 330
+E+TI+ ++I V++ P GWW G G P +V+
Sbjct: 1123 NEMTIKKDEIIEIVQKEPSGWWLALKNGAEGWVPATYVT 1161
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.017
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 190 FAYDASEADELTIRPGDVIRDVERLPGGWWRG---ELRGNR--GMFPDNF 324
+ Y +S +D+L PG VI V L G W+ G + GNR G FP +F
Sbjct: 12 YPYRSSFSDDLEFDPGQVIDVVSNLDGDWYTGTYVDSDGNRKIGSFPKDF 61
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 33.9 bits (74), Expect = 0.029
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 190 FAYDASEADELTIRPGDVIRDVERLPGGWWRG----ELRGNRGMFPDNFVSLL 336
+AY A+ E+ + D + + R GWW+G G G+FP N++ L
Sbjct: 361 YAYKATLPSEIDLNVDDTLVVLNRQKDGWWKGLVVSPTVGRIGLFPSNYIEEL 413
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 33.1 bits (72), Expect = 0.051
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 157 NLSQKVSCTVN--FAYDASEADELTIRPGDVIRDVERLPGGWWRG-ELRGN-RGMFPDNF 324
++ +++ C V +A+ +L GD+I + G WW G + N +G+FP NF
Sbjct: 2 SIPKQLPCMVRALYAWPGEREGDLKFTEGDLIECLSIGDGKWWIGRHINTNTQGIFPSNF 61
Query: 325 VSLLN 339
V L+
Sbjct: 62 VHCLD 66
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 32.3 bits (70), Expect = 0.090
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +1
Query: 190 FAYDASEADELTIRPGDVIRDVERLPGGWWRG-------ELRGNRGMFPDNF 324
+++ EL + GDVI+ E+L W+ G E GN GMFP N+
Sbjct: 288 YSFTGRNEKELDLHTGDVIQVSEQLGPDWYMGEKVNSKAEKLGNSGMFPVNY 339
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 305 PRFPRNSPRHQPPGNLSTSRITSPGLIVSSSASDASYAKLTVQ 177
P PR P H+PP + +T + S+S + YA ++ Q
Sbjct: 630 PPTPRTKPSHKPPVSYKNKLVTQSAIGRSTSVREGRYAGISSQ 672
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 199 DASEADELTIRPGDVIRDVERLPGGWWRGELRGNRGMFPDNFV 327
++S L GD I +E L GW G RG FP + +
Sbjct: 13 NSSNPSFLKFSAGDTIIVIEVLEDGWCDGICSEKRGWFPTSCI 55
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 71 SELKCAICGSMK*KIRDVVISVQCRQWRQIYHK 169
S + C CGS + RD + V+C +I H+
Sbjct: 114 SNMNCYACGSYGHQARDCTMGVKCYSCGKIGHR 146
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -1
Query: 374 PCTPVDLVVACSFRRETKLSGNMPRFPRNSPRHQPPGNLSTSRITSPGLIVSSSA 210
P P V+ ++ + +LS + FP S P N+ T+ T+ S+A
Sbjct: 315 PSQPSKTNVSAAYEKPAELSSSSVPFPHKSQDSATPANVETTPSTATSAPKKSTA 369
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 329 ETKLSGNMPRFPRNSPRHQ-PPGNLSTSRITSPGLIVSSSASDASYAKL 186
E+ LS P +N R P LS S ++SP + +SAS +++ L
Sbjct: 66 ESPLSKRNPTIKQNRVRFDLPDDELSRSNVSSPEKTLLTSASTSTFDSL 114
>SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 26.2 bits (55), Expect = 5.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 305 PRFPRNSPRHQPPGNLSTSRITSPGLIVSSSASDASYA 192
PR P S R Q GN + + + G I SSA+ +YA
Sbjct: 42 PRMPPPSTRPQTDGNSNQIPMENVGHISLSSANSHAYA 79
>SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 615
Score = 26.2 bits (55), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 592 VKEQCRVLFTYA-AVNDDELNLNEGDIVTVISKXAPESXLVA 714
+K +C V +A ++ DE+ LNEG + V K LVA
Sbjct: 213 IKGECVVKLLHAVSMRTDEIKLNEGSVNFVTGKEDVSINLVA 254
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,877,598
Number of Sequences: 5004
Number of extensions: 51128
Number of successful extensions: 153
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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