Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_B08
(863 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0233 - 13069467-13069925 38 0.014
04_03_0884 + 20543084-20543638 35 0.073
01_04_0138 + 16554175-16554822 33 0.39
06_01_0168 - 1340119-1340232,1340615-1340815 32 0.51
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 32 0.51
01_05_0147 + 18597194-18597643,18598347-18598681,18600073-186001... 32 0.51
10_05_0098 + 9148424-9148682,9148817-9148905 31 0.90
07_03_0600 + 19866757-19867218,19867920-19868429 31 0.90
04_04_0146 + 23106325-23108154 31 1.2
01_06_1377 + 36764461-36765339 31 1.2
03_02_0045 - 5251234-5251305,5251362-5251419,5252256-5252539,525... 31 1.6
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 30 2.1
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 30 2.7
02_05_0224 + 26948263-26948520,26948831-26948907,26949597-269496... 30 2.7
08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766 29 3.6
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 29 3.6
04_03_1017 + 21747044-21748051 29 3.6
02_05_0625 + 30453521-30453890,30454215-30454352,30454458-304547... 29 3.6
10_07_0053 - 12406958-12407011,12407012-12407168,12407280-124074... 29 4.8
07_01_0568 - 4216898-4216911,4216997-4217024,4217265-4217335,421... 29 4.8
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 29 4.8
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702... 29 6.3
12_01_0480 - 3776563-3777099 29 6.3
11_06_0070 + 19802893-19803026,19803054-19803816 29 6.3
11_01_0315 - 2347254-2347345,2347485-2347895,2348182-2349633,234... 29 6.3
09_04_0379 - 17094540-17094868,17095354-17095717 29 6.3
08_01_0443 + 3930381-3930908 29 6.3
07_03_1285 + 25477542-25477625,25477776-25477832,25477973-254780... 29 6.3
07_03_0565 - 19561078-19561425,19562253-19563746 29 6.3
04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158 29 6.3
08_02_0178 - 13853847-13854416 28 8.4
07_01_0217 + 1620625-1621419,1621982-1622152,1622581-1622865,162... 28 8.4
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 28 8.4
05_03_0200 + 9752625-9753182 28 8.4
04_03_1030 + 21838282-21838593 28 8.4
04_03_0757 + 19316949-19317892,19318403-19318430,19318932-19319042 28 8.4
01_01_0012 + 71903-72935,73468-73981,74619-76008 28 8.4
>04_03_0233 - 13069467-13069925
Length = 152
Score = 37.5 bits (83), Expect = 0.014
Identities = 39/97 (40%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Frame = +2
Query: 200 RRGAATSAARDRGQGRSEDTAPSPSRRRACSPG---RHPGTWRRRRSLPITGGVATFALG 370
RRG R R +GR E A S RR PG R PG RR L + GGVA
Sbjct: 15 RRGGG---GRRRVRGREEAAAASVKRRGGAWPGSGRRRPG--MRRGGLDLVGGVA----- 64
Query: 371 GKGAPAKV*FER-----GGSTLGGPCWRRG---LAAW 457
G G A V E GG L G WRRG + AW
Sbjct: 65 GGGEQAAVWGEEKRRGGGGLDLSGGDWRRGGKTVGAW 101
>04_03_0884 + 20543084-20543638
Length = 184
Score = 35.1 bits (77), Expect = 0.073
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -3
Query: 429 GPPRVEPPRSNYTFAGAPFPPRAKVAT---PPVIGSERLRLQVPGWRPGEQ 286
GP + PPRS + A AP PP+ K+A S+R + + GW PGE+
Sbjct: 10 GPMAMAPPRSGHATAAAPPPPQHKMAMMMHMTFFWSDRAVVLIRGW-PGER 59
>01_04_0138 + 16554175-16554822
Length = 215
Score = 32.7 bits (71), Expect = 0.39
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Frame = +2
Query: 206 GAATSAARDRGQGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATFALGG---- 373
G S+ R T SRRR + GR G RRS A G
Sbjct: 91 GDGESSRRREAAALHRSTMRRGSRRRKAAIGRRTGKSGTRRSRRCVAAAARVKPNGDRRR 150
Query: 374 KGAPAKV*FERGGSTLGGPCWRRGLA 451
K A +V ++ GGS GG W G A
Sbjct: 151 KKAAGRVVWQEGGSGGGGEKWMGGRA 176
>06_01_0168 - 1340119-1340232,1340615-1340815
Length = 104
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +2
Query: 206 GAATSAARDRGQGRSEDTAPSPSRRRACSPG---RHPGTWRRRR 328
G +A D G G A RRR+ +PG R G WRRRR
Sbjct: 16 GGGDAAPDDDGGGEQRPVAVDHRRRRSFAPGAADRSMGDWRRRR 59
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 474 AGRRVRQAARPRLQHGPP-RVEPPRSNYTFAGAPFPPRAKVA 352
AG+ R RP+ QH PP R PPR ++ + P A V+
Sbjct: 83 AGKSTRVLNRPQRQHSPPGRALPPRESFRYNPKPAKAAAAVS 124
>01_05_0147 +
18597194-18597643,18598347-18598681,18600073-18600147,
18600325-18600427,18601554-18601642,18602953-18603064,
18604093-18604146,18604271-18604319,18606236-18606347,
18606389-18606436,18607000-18607327
Length = 584
Score = 32.3 bits (70), Expect = 0.51
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 203 RGAATSAARDRGQGRSEDTAPSPSRRRACSPGRHPGTWRRRRS 331
RG ++ +RD D+A SPS A SP R P R RS
Sbjct: 17 RGRSSRRSRDASSDPDPDSASSPSPSSASSPSRSPDRRSRSRS 59
>10_05_0098 + 9148424-9148682,9148817-9148905
Length = 115
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 206 GAATSAARDRGQGRS--EDTAPSPSRRRACSPGRHPGTWRR 322
G +SAAR++ + RS E T + R+ A GRHP WR+
Sbjct: 16 GGGSSAAREKERPRSFDEKTRSACWRKAAVVMGRHPERWRQ 56
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 31.5 bits (68), Expect = 0.90
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = -3
Query: 594 QVPAETTMAGKHLR*PEGEASAVAAHPVRENRADRLDGSEAGRRVRQAARPRL-QHGPPR 418
Q P T G H P + S A P + + + +Q P Q GPP
Sbjct: 3 QPPPPTMNGGHHAAPPPPQVSG--APPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPPH 60
Query: 417 VEPPRSNYTFAGAPFPPRAKVATPP 343
PP+ G P PP + A PP
Sbjct: 61 APPPQQPPAMWGQPPPPPPQYAPPP 85
>04_04_0146 + 23106325-23108154
Length = 609
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 468 RRVRQAARPRLQHG-PPRVEPPRSNYTFAGAPFPPRAKVATPPVIGSERLRLQVP 307
R +R RPR P + PP +A P PP+A A P ++ + + L +P
Sbjct: 3 RALRLRHRPRRPPPVPAQAPPPSPRPWYAAPPPPPQAAAADPLLVAASEVALALP 57
>01_06_1377 + 36764461-36765339
Length = 292
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -3
Query: 549 PEGEASAVAAHPVRENRADRLDGSEAGR-RVRQAARPRLQHGPPRVEPPRSNYTFAGAPF 373
P+ ASA+ P+ R G G+ R+R A R R P PP S+ + P
Sbjct: 121 PDSPASALITLPLL-----RPSGRPQGKLRIRLALRERSPPPPEPQYPPPSSSPYYFPPP 175
Query: 372 PPRAKVA-TPPVIGSER 325
PP A A PP GSE+
Sbjct: 176 PPPAYSAPPPPQYGSEQ 192
>03_02_0045 -
5251234-5251305,5251362-5251419,5252256-5252539,
5252836-5253019,5253564-5253814,5253921-5254024,
5254143-5254281
Length = 363
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 447 RPRLQHGPPRVEPPRSNYTFAGAPFPPRAKVATPPVIGS 331
R RL+ G R+ P R + + A P PP ATPP G+
Sbjct: 10 RRRLRGGGHRLLPSRPSTSAASQPPPPPPSAATPPPPGA 48
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -3
Query: 456 QAARPRLQHGP--PRVEPPRSNYTFAGAPFPPRAKVATPP 343
Q P L H P P + P A AP PPRA TPP
Sbjct: 161 QDPAPSLPHAPAPPPPQAPAPTPPQAPAPTPPRAPTPTPP 200
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 29.9 bits (64), Expect = 2.7
Identities = 30/120 (25%), Positives = 51/120 (42%)
Frame = -3
Query: 543 GEASAVAAHPVRENRADRLDGSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPR 364
GEA+A AA + D DG EA +R RP+L+ PP + + P +
Sbjct: 165 GEAAASAAKQEAKGNGDG-DG-EAAPLLR---RPQLRSDYSTHRPPPGGRSRGRSRHPRK 219
Query: 363 AKVATPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDRP*PRSRAADVAAPRRYTKRT 184
A+ +P + G +R P WR ++ R++ P A +V + + ++T
Sbjct: 220 AESTSPSISGGDRGSRSGP-WRQLKRWRKVASRAVQRKSLPAGERGADEVCSGGEHRRKT 278
>02_05_0224 +
26948263-26948520,26948831-26948907,26949597-26949658,
26949797-26949915,26950326-26950493,26950587-26950619
Length = 238
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -3
Query: 465 RVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAKVATPPVI 337
R A P PPR P GAP PPR A P++
Sbjct: 16 RTAAALSPFSSSAPPRHSPRILRAIPVGAPHPPRVSAAVSPLV 58
>08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766
Length = 310
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 459 RQAARPRLQHGP-PRVEPPRSNYTFAGAPFPPRAKVATPPVIGSERLRLQVPGW-RPG 292
RQA R L P P +P S+ +GA PP ++ AT +E + + GW RPG
Sbjct: 160 RQALRDALSLDPSPPAKPLDSS---SGATAPPSSQAATSYASSAENIARLLEGWMRPG 214
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 478 RTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLHKIAGREPTA 624
+ VE + LADWV + G T TG C+G L + ++P+A
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPSA 238
>04_03_1017 + 21747044-21748051
Length = 335
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 233 RGQGRSEDTAP-SPSRRRACSPGRHPGTWRRRRSLP 337
R S D P SP RRRA SP P T RR + P
Sbjct: 170 RAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASP 205
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 215 TSAARDRGQGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLP 337
T + R + S D +PS RRA SP P T RR + P
Sbjct: 179 TPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASP 219
>02_05_0625 +
30453521-30453890,30454215-30454352,30454458-30454727,
30454844-30454983,30455067-30455213,30455319-30456008
Length = 584
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 656 SSSRSAQWWHCAVGSLPAILCKYRPKQPWPV 564
SSS ++ H ++ S P Y+P+ PWP+
Sbjct: 457 SSSFASSTSHSSLNSAPRTDASYKPQPPWPI 487
>10_07_0053 -
12406958-12407011,12407012-12407168,12407280-12407410,
12407592-12407727,12407953-12408224,12408604-12408893,
12408984-12409285,12409359-12409424,12409506-12409571,
12409855-12409926,12410013-12410084,12410207-12410281,
12410367-12410438,12410531-12410663,12411556-12411655
Length = 665
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 257 TAPSPSRRRACSPGRH 304
TAP PSR R SPGRH
Sbjct: 237 TAPPPSRNRKKSPGRH 252
>07_01_0568 -
4216898-4216911,4216997-4217024,4217265-4217335,
4218026-4218140,4218245-4218314,4218552-4218646,
4219320-4219379,4219476-4219547,4219676-4219819
Length = 222
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 417 VEPPRSNYTFAGAPFPPRAKVATPP 343
+ PP + TFAGAP PP + PP
Sbjct: 2 ITPPVAGDTFAGAPPPPSQEEDAPP 26
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +2
Query: 218 SAARDRGQGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATFALGGKGAP 385
+A + R + P P + AC+ H W SLP G AT G+ AP
Sbjct: 329 TADQPRLSEEDKQNMPLPVQGPACNSSGHLAGWHTFNSLPFAGKTATVV--GEAAP 382
>12_02_0529 -
20067974-20068588,20069982-20070048,20070156-20070264,
20070357-20070402,20070501-20070636,20070745-20070866,
20070944-20071306,20071914-20072043,20072129-20072202,
20072620-20072709,20072836-20072875,20073047-20073117,
20074248-20074277
Length = 630
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +2
Query: 200 RRGAATSAARDRGQGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGG 349
RRG A A R G R AP RR + G G WR+ + GG
Sbjct: 429 RRGQARGAERGGG-ARRRSVAPERRRRTSGGGGGGQGAWRQSAAEERGGG 477
>12_01_0480 - 3776563-3777099
Length = 178
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +2
Query: 260 APSPSRRRACSPGRHPGTWRRRRSLPITGGVATF--ALGGKGAPAKV*FERGGSTLGGPC 433
+P+P R S R WRRRR GG A G G+PA E LG P
Sbjct: 7 SPAPERAGTPSERRRRWCWRRRRG----GGDARIGGGSGSAGSPAAEEDEAARPFLGMPG 62
Query: 434 W 436
W
Sbjct: 63 W 63
>11_06_0070 + 19802893-19803026,19803054-19803816
Length = 298
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 206 GAATSAARDRGQGRSEDTAPSPSRRRACSPGRHPGTWRRR 325
GAAT+ R+RG ED A + A S G P T+R R
Sbjct: 69 GAATAFRRNRGAAGGEDNAATSVEETATSIG-VPATYRSR 107
>11_01_0315 -
2347254-2347345,2347485-2347895,2348182-2349633,
2349688-2350045,2350818-2351177,2351321-2351419,
2351856-2351948,2352078-2352215,2352389-2352476,
2352682-2352770,2353113-2353178,2353370-2353481,
2354702-2354901
Length = 1185
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -3
Query: 537 ASAVAAHPVRENRADRLDGSEAGRRVRQA-ARPRLQHGPPRVEPPR--SNYTFAGAPFPP 367
A AV HP + A S R R++ R+EPPR S+ F +P PP
Sbjct: 422 AVAVFPHPPSQRAAAAAGASRVPAIASSPRGRRRIEGSGRRIEPPRPPSHRGFRPSPPPP 481
Query: 366 RAKVATPPV 340
+PP+
Sbjct: 482 GVAYNSPPL 490
>09_04_0379 - 17094540-17094868,17095354-17095717
Length = 230
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 554 VSRKVRHPRSRPTQSARTGRTASTVRRPADG 462
+ R++RH +PT AR G + +PA G
Sbjct: 179 IPRRIRHDLEKPTDGARAGGRKRGIGKPAFG 209
>08_01_0443 + 3930381-3930908
Length = 175
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 212 ATSAARDRGQGRSEDTAPSPSRRRACSPGRHPGTWR 319
AT+A +G A S R ACSP HPG++R
Sbjct: 53 ATAAVVSSSRGGGGLGARSRRRECACSPTTHPGSFR 88
>07_03_1285 +
25477542-25477625,25477776-25477832,25477973-25478040,
25478187-25478391,25478429-25478586,25478865-25478940,
25479065-25479124,25479186-25479236,25479663-25479741,
25480183-25480271
Length = 308
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = -1
Query: 626 CAVGSLPAILCKYRPKQPWPVSICVSRKVRHPR------SRPTQSARTGRTASTVRRPAD 465
C G +P +C+ +P PV CV H + S QS + +ST ++ A+
Sbjct: 118 CKCG-MPLCICEAPKPEPVPVKFCVPPPNEHMQQSISTTSSSAQSNPRPKKSSTNQQSAE 176
Query: 464 GSAKRRDHASSTD 426
S K+ SS++
Sbjct: 177 SSVKKASATSSSN 189
>07_03_0565 - 19561078-19561425,19562253-19563746
Length = 613
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 269 PSRRRACSPGRHPGTWRRRR-SLPITGGVATFALGGKGAPAKV*FERGGSTLGGPCWR 439
P RR +P H T +RRR S+ + + A G+G F R +T GG W+
Sbjct: 385 PGRRSVAAPPSHMATPQRRRNSVDVPRRLPACASVGRGEGGV--FGRHATTTGGARWK 440
>04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158
Length = 974
Score = 28.7 bits (61), Expect = 6.3
Identities = 29/95 (30%), Positives = 33/95 (34%), Gaps = 1/95 (1%)
Frame = -3
Query: 486 DGSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAKVATPPVIGSERLRLQVP 307
DG G R A R Q P PPR + P V T G ER + ++
Sbjct: 308 DGGPGGSRPADARGKRKQEDTPSPSPPRGGGAVRASSRRPEGAVPTSQPEG-ERKKKRLR 366
Query: 306 GWRPGEQAR-RLEGDGAVSSDRP*PRSRAADVAAP 205
E R L S RP RSR A A P
Sbjct: 367 KMGGTEPCRGNLISPSRWSFSRPPRRSRRALPAIP 401
>08_02_0178 - 13853847-13854416
Length = 189
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -3
Query: 477 EAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAKVATPPVIGSERLRLQVP 307
+A RR + P LQ+ V PP + PFPP+A A G + QVP
Sbjct: 124 KAARRTKATTAPILQYSVGYV-PPHVHPQVMTRPFPPQAAQAPVYFAGQHQPPGQVP 179
>07_01_0217 +
1620625-1621419,1621982-1622152,1622581-1622865,
1623113-1623262
Length = 466
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -3
Query: 561 HLR*PEGEASAVAAHPVRENRADRLDGSEAGRRVRQAARPRLQ 433
HLR P G A A A ++ R+DG E GR V PRL+
Sbjct: 106 HLRPPPGGAFAALATATIQSC--RVDGGELGRLVSSPQCPRLE 146
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = -3
Query: 510 RENRADRLDGSEAGRRVRQAAR-PRLQHGPPRVEPPRSNYTFAGAPFPPRAKVATPPVIG 334
RE R +GS VR R P+ +V P+ + + +P P R + + P
Sbjct: 270 RERSPVRRNGSPRRSPVRSIGRSPQRDRVKEQVRSPKQAQSRSRSPSPARKRESRSPSPR 329
Query: 333 SERLRLQVPGWRPGEQARRLEGDGAVSSDR 244
S+RLR + R G A EGD ++ R
Sbjct: 330 SKRLR-RAQSEREGADA--TEGDRRKTTSR 356
>05_03_0200 + 9752625-9753182
Length = 185
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 206 GAATSAARDRGQGRSEDTAPSPSRRRACSPGRHPGTWRRR 325
GAAT+ R+RG ED + + A S G P T+R R
Sbjct: 16 GAATAFRRNRGAAGGEDDTATSTEETATSVG-VPATYRSR 54
>04_03_1030 + 21838282-21838593
Length = 103
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 200 RRGAATSAARDRGQGRSEDTAPSPSRRRACSPGRHPG 310
RRGA S A G GR T P + C+P PG
Sbjct: 67 RRGAKGSTA---GTGRGPATRPCATESTGCNPATRPG 100
>04_03_0757 + 19316949-19317892,19318403-19318430,19318932-19319042
Length = 360
Score = 28.3 bits (60), Expect = 8.4
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Frame = -3
Query: 474 AGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAKVATPPVIGSERLRLQVPGW-- 301
AG R+ + P + + F GA PP + TP G RL +Q P
Sbjct: 131 AGPRLAMQQTSTILAPPMTAKQKQQGIGFGGAVAPPPSPRGTPMAAG-PRLAMQKPSTIL 189
Query: 300 -RPGEQARRLEGDGAVSSDRP*PRSRAAD-VAAPR 202
P ++ +G G S+ P P R VA PR
Sbjct: 190 APPLTTQQKQQGTGFGSAVAPPPSPRGIPMVAGPR 224
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 206 GAATSAARD-RGQGRSEDTAPSPSRRRACSPGRHPGTWRRRR 328
G T +D RG+ RS PSPS RR+ S R P +RR R
Sbjct: 502 GGETVEEKDARGKSRS----PSPSARRSKSRSRSPIKYRRSR 539
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,250,528
Number of Sequences: 37544
Number of extensions: 427737
Number of successful extensions: 2239
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2226
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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