Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_B02
(873 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 293 2e-79
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 293 2e-79
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 293 2e-79
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 264 8e-71
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 264 8e-71
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 242 5e-64
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 206 3e-53
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 293 bits (720), Expect = 2e-79
Identities = 136/209 (65%), Positives = 156/209 (74%), Gaps = 2/209 (0%)
Frame = +2
Query: 23 SSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVR 202
+ MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VR
Sbjct: 10 TDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVR 69
Query: 203 EPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF 382
E DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRF
Sbjct: 70 EADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRF 129
Query: 383 YKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIPLL*CCK--SHCPHSNESCXNSDK 556
YKNWY W D+LG+KSIE DF+KM+ CK HS +
Sbjct: 130 YKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRY---CKVIRVIAHSQIRLIKQRQ 186
Query: 557 RRLTLWKSXFTGGTIEDXVKWPREHLEKP 643
++ + + GG+IED VKW REHLEKP
Sbjct: 187 KKAHVMEIQLNGGSIEDKVKWAREHLEKP 215
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +1
Query: 562 AHIMEIXLYRWYHRGXSEMAQRTSGETXSLSILCXAQDEMIDCXXCXXGPQDTRGSXXXW 741
AH+MEI L + A+ + +S + QDEMIDC G + +G W
Sbjct: 189 AHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKG-KGFKGVTSRW 246
Query: 742 XTXKLP 759
T KLP
Sbjct: 247 HTKKLP 252
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 293 bits (719), Expect = 2e-79
Identities = 136/207 (65%), Positives = 155/207 (74%), Gaps = 2/207 (0%)
Frame = +2
Query: 29 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 389 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIPLL*CCK--SHCPHSNESCXNSDKRR 562
NWY W D+LG+KSIE DF+KM+ CK HS +++
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRY---CKVIRVIAHSQIRLIKQRQKK 177
Query: 563 LTLWKSXFTGGTIEDXVKWPREHLEKP 643
+ + GG+IED VKW REHLEKP
Sbjct: 178 AHVMEIQLNGGSIEDKVKWAREHLEKP 204
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +1
Query: 562 AHIMEIXLYRWYHRGXSEMAQRTSGETXSLSILCXAQDEMIDCXXCXXGPQDTRGSXXXW 741
AH+MEI L + A+ + +S + QDEMIDC G + +G W
Sbjct: 178 AHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKG-KGFKGVTSRW 235
Query: 742 XTXKLP 759
T KLP
Sbjct: 236 HTKKLP 241
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 293 bits (719), Expect = 2e-79
Identities = 136/207 (65%), Positives = 155/207 (74%), Gaps = 2/207 (0%)
Frame = +2
Query: 29 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 389 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIPLL*CCK--SHCPHSNESCXNSDKRR 562
NWY W D+LG+KSIE DF+KM+ CK HS +++
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRY---CKVIRVIAHSQIRLIKQRQKK 177
Query: 563 LTLWKSXFTGGTIEDXVKWPREHLEKP 643
+ + GG+IED VKW REHLEKP
Sbjct: 178 AHVMEIQLNGGSIEDKVKWAREHLEKP 204
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +1
Query: 562 AHIMEIXLYRWYHRGXSEMAQRTSGETXSLSILCXAQDEMIDCXXCXXGPQDTRGSXXXW 741
AH+MEI L + A+ + +S + QDEMIDC G + +G W
Sbjct: 178 AHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKG-KGFKGVTSRW 235
Query: 742 XTXKLP 759
T KLP
Sbjct: 236 HTKKLP 241
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 264 bits (648), Expect = 8e-71
Identities = 123/194 (63%), Positives = 142/194 (73%), Gaps = 2/194 (1%)
Frame = +2
Query: 68 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 247
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 248 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 427
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 428 XXXWQDELGRKSIEKDFKKMIPLL*CCK--SHCPHSNESCXNSDKRRLTLWKSXFTGGTI 601
W D+LG+KSIE DF+KM+ CK HS +++ + + GG+I
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRY---CKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSI 177
Query: 602 EDXVKWPREHLEKP 643
ED VKW REHLEKP
Sbjct: 178 EDKVKWAREHLEKP 191
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +1
Query: 562 AHIMEIXLYRWYHRGXSEMAQRTSGETXSLSILCXAQDEMIDCXXCXXGPQDTRGSXXXW 741
AH+MEI L + A+ + +S + QDEMIDC G + +G W
Sbjct: 165 AHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKG-KGFKGVTSRW 222
Query: 742 XTXKLP 759
T KLP
Sbjct: 223 HTKKLP 228
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 264 bits (648), Expect = 8e-71
Identities = 123/194 (63%), Positives = 142/194 (73%), Gaps = 2/194 (1%)
Frame = +2
Query: 68 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 247
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 248 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 427
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 428 XXXWQDELGRKSIEKDFKKMIPLL*CCK--SHCPHSNESCXNSDKRRLTLWKSXFTGGTI 601
W D+LG+KSIE DF+KM+ CK HS +++ + + GG+I
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRY---CKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSI 177
Query: 602 EDXVKWPREHLEKP 643
ED VKW REHLEKP
Sbjct: 178 EDKVKWAREHLEKP 191
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +1
Query: 562 AHIMEIXLYRWYHRGXSEMAQRTSGETXSLSILCXAQDEMIDCXXCXXGPQDTRGSXXXW 741
AH+MEI L + A+ + +S + QDEMIDC G + +G W
Sbjct: 165 AHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKG-KGFKGVTSRW 222
Query: 742 XTXKLP 759
T KLP
Sbjct: 223 HTKKLP 228
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 242 bits (592), Expect = 5e-64
Identities = 105/123 (85%), Positives = 114/123 (92%)
Frame = +2
Query: 29 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 389 NWY 397
NWY
Sbjct: 121 NWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 206 bits (503), Expect = 3e-53
Identities = 90/108 (83%), Positives = 99/108 (91%)
Frame = +2
Query: 68 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 247
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 248 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 391
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,703,136
Number of Sequences: 53049
Number of extensions: 767605
Number of successful extensions: 1850
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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