Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_A24
(886 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 35 0.45
BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein. 31 4.2
AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence si... 31 4.2
AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence si... 31 4.2
AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein pr... 31 4.2
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 5.6
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 5.6
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 5.6
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 5.6
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 5.6
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 5.6
AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy ch... 31 5.6
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 5.6
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 34.7 bits (76), Expect = 0.45
Identities = 43/145 (29%), Positives = 57/145 (39%), Gaps = 5/145 (3%)
Frame = +2
Query: 125 TSQPESRKAPPSPRYYSVCISTIYSGLRRPIWRSSPM-TPPSTTRVGRRRCFIDDFRPRL 301
T P A SP S+ + + L R R+SP TPP + R PR
Sbjct: 159 TGTPPRAWATRSPSTASLTRTPSRASLTRWPPRASPTRTPPRESPRMSHRASPTRTPPRA 218
Query: 302 PPWDXXXXXXXXXXXPRKAQRCSSKGVALRTPR*ASPSRL--GASITPPPPFAQSRC--S 469
P PR++ R S + R P ASP+R AS T PP A
Sbjct: 219 SPTRRPPRASPTRTPPRESLRTSHRASPTRMPPRASPTRRPPRASPTGSPPRASPMTPPR 278
Query: 470 TSPYRGPRRSNI*ASPSXSRMTFRP 544
SP R P R++ +PS + +T P
Sbjct: 279 ASP-RTPPRASPTTTPSRASLTRTP 302
>BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein.
Length = 755
Score = 31.5 bits (68), Expect = 4.2
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 322 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAV---RPITMFDQPIPWAP 492
R WR+ +P S+ +L GR P L P +R +P+P + +F P P A
Sbjct: 650 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 708
Query: 493 KVKYLG 510
K + G
Sbjct: 709 KTPHPG 714
>AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence
similarity 22, member F protein.
Length = 655
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 322 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPA 447
R WR+ +P S+ +L GR P L P +R +P+P+
Sbjct: 549 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 590
>AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence
similarity 22, member G protein.
Length = 622
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 322 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPA 447
R WR+ +P S+ +L GR P L P +R +P+P+
Sbjct: 516 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 557
>AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 31.5 bits (68), Expect = 4.2
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 322 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAV---RPITMFDQPIPWAP 492
R WR+ +P S+ +L GR P L P +R +P+P + +F P P A
Sbjct: 508 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 566
Query: 493 KVKYLG 510
K + G
Sbjct: 567 KTPHPG 572
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +2
Query: 101 RERVPGPV----TSQPESRKAPPSPRYYSVCISTIYSGLRRPIWRSSPMTPPSTTR 256
R R P P T P R+ PSPR YS I YS P R++ PP R
Sbjct: 569 RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRR 624
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +2
Query: 101 RERVPGPV----TSQPESRKAPPSPRYYSVCISTIYSGLRRPIWRSSPMTPPSTTR 256
R R P P T P R+ PSPR YS I YS P R++ PP R
Sbjct: 569 RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRR 624
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +2
Query: 101 RERVPGPV----TSQPESRKAPPSPRYYSVCISTIYSGLRRPIWRSSPMTPPSTTR 256
R R P P T P R+ PSPR YS I YS P R++ PP R
Sbjct: 578 RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRR 633
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +2
Query: 101 RERVPGPV----TSQPESRKAPPSPRYYSVCISTIYSGLRRPIWRSSPMTPPSTTR 256
R R P P T P R+ PSPR YS I YS P R++ PP R
Sbjct: 569 RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRR 624
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +2
Query: 101 RERVPGPV----TSQPESRKAPPSPRYYSVCISTIYSGLRRPIWRSSPMTPPSTTR 256
R R P P T P R+ PSPR YS I YS P R++ PP R
Sbjct: 578 RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRR 633
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +2
Query: 101 RERVPGPV----TSQPESRKAPPSPRYYSVCISTIYSGLRRPIWRSSPMTPPSTTR 256
R R P P T P R+ PSPR YS I YS P R++ PP R
Sbjct: 567 RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRR 622
>AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 133
Score = 31.1 bits (67), Expect = 5.6
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 223 LFADDTAIYYSCRKKALLHRRLQTAATTM-GQWFRKW 330
L +DDTA+YY R + + H + T G WF W
Sbjct: 86 LRSDDTAVYYCARDQGIPHYDFWSGITPEDGDWFDPW 122
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +2
Query: 101 RERVPGPV----TSQPESRKAPPSPRYYSVCISTIYSGLRRPIWRSSPMTPPSTTR 256
R R P P T P R+ PSPR YS I YS P R++ PP R
Sbjct: 567 RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRR 622
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,872,600
Number of Sequences: 237096
Number of extensions: 3024924
Number of successful extensions: 20554
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20519
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -