Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_A08
(820 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 42 5e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 42 5e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 41 2e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 40 4e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 39 5e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 38 8e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 38 1e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 34 0.002
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 32 0.006
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 28 0.090
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 28 0.090
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 28 0.090
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.28
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 26 0.36
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 26 0.48
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 26 0.48
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 26 0.48
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 25 0.84
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 7.8
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 42.3 bits (95), Expect = 5e-06
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 147 STRSSQRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 326
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 327 -GCSTWLVSSERLWRPDVVLLNAA 395
G ++ +LW+PD+++ N+A
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSA 147
Score = 28.7 bits (61), Expect = 0.068
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +1
Query: 409 GTTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
GT + V++NGS + + + + +P D Q C FGS + +++D V
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 210
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 42.3 bits (95), Expect = 5e-06
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 147 STRSSQRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 326
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 327 -GCSTWLVSSERLWRPDVVLLNAA 395
G ++ +LW+PD+++ N+A
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSA 147
Score = 28.7 bits (61), Expect = 0.068
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +1
Query: 409 GTTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
GT + V++NGS + + + + +P D Q C FGS + +++D V
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 210
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 234 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 395
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 28.7 bits (61), Expect = 0.068
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 409 GTTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
GT ++ V+++GS + + M + +P D Q C FGS + +++D V
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 234 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 395
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 27.5 bits (58), Expect = 0.16
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 409 GTTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
GT ++ V+++GS + + + + +P D Q C FGS + +++D V
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 234 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 395
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 27.9 bits (59), Expect = 0.12
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 409 GTTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
GT ++ V+++GS + + + + +P D Q C FGS + +++D V
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 234 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 395
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 27.5 bits (58), Expect = 0.16
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 409 GTTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
GT ++ V+++GS + + + + +P D Q C FGS + +++D V
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 234 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 395
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 29.1 bits (62), Expect = 0.052
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 409 GTTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
GT ++ V+++GS + + M + +P D Q C FGS + +++D V
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 234 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 395
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 29.9 bits (64), Expect = 0.030
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 409 GTTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
GT ++ V++NGS + + + + +P D Q C FGS + +++D V
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 40.7 bits (91), Expect = 2e-05
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 198 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 365
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 366 RPDVVLLNAA 395
PD+VL N A
Sbjct: 104 LPDIVLYNNA 113
Score = 24.2 bits (50), Expect = 1.5
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +1
Query: 412 TTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMD 576
TT++ + G V + + + +P D QTC FGS + ++D
Sbjct: 120 TTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 40.3 bits (90), Expect = 2e-05
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 395
++ +W D +L W+ E+G L V S+ +WRPD+VL N A
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 493 MQLDXWPNDXQTCTFXFGSRMHHSDEMD 576
+ ++ +P D QTC FGS + ++D
Sbjct: 151 IDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 40.3 bits (90), Expect = 2e-05
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 165 RTIGSLPPXSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 338
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 339 WLVSSERLWRPDVVLLNAA 395
V SE +W PD+VL N A
Sbjct: 95 LHVPSEHIWLPDIVLYNNA 113
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 493 MQLDXWPNDXQTCTFXFGS 549
+ ++ +P D QTC FGS
Sbjct: 147 IDVEYFPFDEQTCFMKFGS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 195 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 368
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 369 PDVVLLNAA 395
PD+VL N A
Sbjct: 113 PDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 195 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 368
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 369 PDVVLLNAA 395
PD+VL N A
Sbjct: 113 PDIVLYNNA 121
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 493 MQLDXWPNDXQTCTFXFGSRMHHSDEMD 576
+ ++ +P D QTC FGS + ++D
Sbjct: 155 IDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 39.5 bits (88), Expect = 4e-05
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 395
++ W D +L WN E+G L V SE +W PD+VL N A
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
Score = 25.0 bits (52), Expect = 0.84
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = +1
Query: 412 TTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMD 576
T ++ + G VS + + ++ +P D Q+C FGS ++ ++D
Sbjct: 133 TLMTKATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 39.1 bits (87), Expect = 5e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 198 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 374
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 375 VVLLNAA 395
+L N A
Sbjct: 92 TILYNNA 98
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 38.3 bits (85), Expect = 8e-05
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 195 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 368
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 369 PDVVLLNAA 395
PD+VL N A
Sbjct: 111 PDIVLFNNA 119
Score = 26.6 bits (56), Expect = 0.28
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 442 NGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEM 573
NG V + + ++ + +P D QTC FGS + D++
Sbjct: 136 NGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQV 179
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.9 bits (84), Expect = 1e-04
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 162 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTW 341
+R +G+ + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 342 L-VSSERLWRPDVVLLNAA 395
L + RLW+PDV++ N+A
Sbjct: 98 LRIPPHRLWKPDVLMYNSA 116
Score = 26.2 bits (55), Expect = 0.36
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +1
Query: 409 GTTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMD 576
GT + V NNG+ + + + + +P D Q C FGS + ++D
Sbjct: 122 GTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 37.5 bits (83), Expect = 1e-04
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 204 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 380
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 381 L 383
+
Sbjct: 122 M 122
Score = 25.0 bits (52), Expect = 0.84
Identities = 12/47 (25%), Positives = 19/47 (40%)
Frame = +1
Query: 433 VSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEM 573
V N+G++ + + WP D CT S H S+E+
Sbjct: 141 VFNSGTILCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 33.9 bits (74), Expect = 0.002
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 403 PPGTTLSAPXVSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMD 576
PP T L V ++GSVS + + + WP D C FGS +H +E++
Sbjct: 145 PPTTCL----VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVN 198
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.3 bits (70), Expect = 0.006
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 237 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 389
I E + T + + +W+D+RL++ G+ + + R+W+PD N
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 28.7 bits (61), Expect = 0.068
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 442 NGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGS 549
+G V RL I M L+ +P D Q C FGS
Sbjct: 115 DGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 28.3 bits (60), Expect = 0.090
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 279 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 389
+ +W D RLS+ S + ER+WRPD N
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 28.3 bits (60), Expect = 0.090
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 442 NGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
NGSV R+ ++ M L +P D Q C+ S +D++ F+
Sbjct: 145 NGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 28.3 bits (60), Expect = 0.090
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 442 NGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
NGSV R+ ++ M L +P D Q C+ S +D++ F+
Sbjct: 145 NGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.28
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 466 RLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDF 579
+L + +M +P+D Q C S H +DEM F
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIF 193
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 26.2 bits (55), Expect = 0.36
Identities = 9/41 (21%), Positives = 22/41 (53%)
Frame = +1
Query: 460 IKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
+ +L + +M+ + +P+D Q C+ S H + ++ F+
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.8 bits (54), Expect = 0.48
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 433 VSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTC 531
+ ++GS++ RL I+ M L +P D Q C
Sbjct: 120 IHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.8 bits (54), Expect = 0.48
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 433 VSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTC 531
+ ++GS++ RL I+ M L +P D Q C
Sbjct: 120 IHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 25.8 bits (54), Expect = 0.48
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 433 VSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTC 531
+ ++GS++ RL I+ M L +P D Q C
Sbjct: 59 IHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.84
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 433 VSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCT 534
+S +GSV+ R + M L +P D Q CT
Sbjct: 143 LSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 2.6
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +1
Query: 433 VSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
+ NG+V+ + R + +L+ +P D C+F S + + +V
Sbjct: 168 IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 2.6
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +1
Query: 433 VSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
+ NG+V+ + R + +L+ +P D C+F S + + +V
Sbjct: 168 IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 2.6
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +1
Query: 433 VSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
+ NG+V+ + R + +L+ +P D C+F S + + +V
Sbjct: 219 IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 2.6
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +1
Query: 433 VSNNGSVSXIKRLDISTPXSMQLDXWPNDXQTCTFXFGSRMHHSDEMDFV 582
+ NG+V+ + R + +L+ +P D C+F S + + +V
Sbjct: 168 IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 341 PSAAAPFPCVPTQS 300
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,115
Number of Sequences: 438
Number of extensions: 3408
Number of successful extensions: 83
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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