Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_A07
         (830 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011765-1|AAH11765.1|  449|Homo sapiens chromosome 11 open read...    31   6.8  
AY358754-1|AAQ89114.1|  449|Homo sapiens C11orf24 protein.             31   6.8  
AF264781-1|AAG36936.1|  449|Homo sapiens DM4E3 protein.                31   6.8  

>BC011765-1|AAH11765.1|  449|Homo sapiens chromosome 11 open reading
           frame 24 protein.
          Length = 449

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 758 LTNLPPPVKLPRLAVSSNRITREF*TATSVSATSPLCTL-GTKRRAPADIIDRAPLPPNR 582
           L  +P    LPR A  +   TR    AT+ + +SP+ T     +  P+D    +P+PP R
Sbjct: 192 LAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDTA-ASPVPPMR 250


>AY358754-1|AAQ89114.1|  449|Homo sapiens C11orf24 protein.
          Length = 449

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 758 LTNLPPPVKLPRLAVSSNRITREF*TATSVSATSPLCTL-GTKRRAPADIIDRAPLPPNR 582
           L  +P    LPR A  +   TR    AT+ + +SP+ T     +  P+D    +P+PP R
Sbjct: 192 LAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDTA-ASPVPPMR 250


>AF264781-1|AAG36936.1|  449|Homo sapiens DM4E3 protein.
          Length = 449

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 758 LTNLPPPVKLPRLAVSSNRITREF*TATSVSATSPLCTL-GTKRRAPADIIDRAPLPPNR 582
           L  +P    LPR A  +   TR    AT+ + +SP+ T     +  P+D    +P+PP R
Sbjct: 192 LAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDTA-ASPVPPMR 250


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,736,109
Number of Sequences: 237096
Number of extensions: 2344780
Number of successful extensions: 4692
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4692
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)