Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_P24
         (827 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   132   4e-31
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   132   4e-31
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   132   4e-31
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   132   4e-31
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   132   4e-31

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  132 bits (320), Expect = 4e-31
 Identities = 61/74 (82%), Positives = 66/74 (89%)
 Frame = -2

Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
           NNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK 
Sbjct: 338 NNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKL 397

Query: 133 TFMGTLKKDRIREE 92
            FMG LKKDR++EE
Sbjct: 398 AFMGPLKKDRLKEE 411



 Score =  107 bits (258), Expect = 1e-23
 Identities = 52/83 (62%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
 Frame = -3

Query: 537 KHRQKKAHNMEIXXNGGTIEDKVKWAREHLEKPIPVDSVFAQ----DCIXXXXXXXXXXX 370
           K RQKKAH MEI  NGG+IEDKVKWAREHLEKPI V +VF Q    DC+           
Sbjct: 183 KQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGV 242

Query: 369 XXRWHTKKLPRKTHKGLRKTTTL 301
             RWHTKKLPRKTHKGLRK   +
Sbjct: 243 TSRWHTKKLPRKTHKGLRKVACI 265


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  132 bits (320), Expect = 4e-31
 Identities = 61/74 (82%), Positives = 66/74 (89%)
 Frame = -2

Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
           NNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK 
Sbjct: 327 NNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKL 386

Query: 133 TFMGTLKKDRIREE 92
            FMG LKKDR++EE
Sbjct: 387 AFMGPLKKDRLKEE 400



 Score =  107 bits (258), Expect = 1e-23
 Identities = 52/83 (62%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
 Frame = -3

Query: 537 KHRQKKAHNMEIXXNGGTIEDKVKWAREHLEKPIPVDSVFAQ----DCIXXXXXXXXXXX 370
           K RQKKAH MEI  NGG+IEDKVKWAREHLEKPI V +VF Q    DC+           
Sbjct: 172 KQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGV 231

Query: 369 XXRWHTKKLPRKTHKGLRKTTTL 301
             RWHTKKLPRKTHKGLRK   +
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACI 254


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  132 bits (320), Expect = 4e-31
 Identities = 61/74 (82%), Positives = 66/74 (89%)
 Frame = -2

Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
           NNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK 
Sbjct: 314 NNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKL 373

Query: 133 TFMGTLKKDRIREE 92
            FMG LKKDR++EE
Sbjct: 374 AFMGPLKKDRLKEE 387



 Score =  107 bits (258), Expect = 1e-23
 Identities = 52/83 (62%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
 Frame = -3

Query: 537 KHRQKKAHNMEIXXNGGTIEDKVKWAREHLEKPIPVDSVFAQ----DCIXXXXXXXXXXX 370
           K RQKKAH MEI  NGG+IEDKVKWAREHLEKPI V +VF Q    DC+           
Sbjct: 159 KQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGV 218

Query: 369 XXRWHTKKLPRKTHKGLRKTTTL 301
             RWHTKKLPRKTHKGLRK   +
Sbjct: 219 TSRWHTKKLPRKTHKGLRKVACI 241


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  132 bits (320), Expect = 4e-31
 Identities = 61/74 (82%), Positives = 66/74 (89%)
 Frame = -2

Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
           NNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK 
Sbjct: 314 NNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKL 373

Query: 133 TFMGTLKKDRIREE 92
            FMG LKKDR++EE
Sbjct: 374 AFMGPLKKDRLKEE 387



 Score =  107 bits (258), Expect = 1e-23
 Identities = 52/83 (62%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
 Frame = -3

Query: 537 KHRQKKAHNMEIXXNGGTIEDKVKWAREHLEKPIPVDSVFAQ----DCIXXXXXXXXXXX 370
           K RQKKAH MEI  NGG+IEDKVKWAREHLEKPI V +VF Q    DC+           
Sbjct: 159 KQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGV 218

Query: 369 XXRWHTKKLPRKTHKGLRKTTTL 301
             RWHTKKLPRKTHKGLRK   +
Sbjct: 219 TSRWHTKKLPRKTHKGLRKVACI 241


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  132 bits (320), Expect = 4e-31
 Identities = 61/74 (82%), Positives = 66/74 (89%)
 Frame = -2

Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
           NNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK 
Sbjct: 327 NNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKL 386

Query: 133 TFMGTLKKDRIREE 92
            FMG LKKDR++EE
Sbjct: 387 AFMGPLKKDRLKEE 400



 Score =  107 bits (258), Expect = 1e-23
 Identities = 52/83 (62%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
 Frame = -3

Query: 537 KHRQKKAHNMEIXXNGGTIEDKVKWAREHLEKPIPVDSVFAQ----DCIXXXXXXXXXXX 370
           K RQKKAH MEI  NGG+IEDKVKWAREHLEKPI V +VF Q    DC+           
Sbjct: 172 KQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGV 231

Query: 369 XXRWHTKKLPRKTHKGLRKTTTL 301
             RWHTKKLPRKTHKGLRK   +
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACI 254


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,589,384
Number of Sequences: 53049
Number of extensions: 514121
Number of successful extensions: 1439
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)