Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_P24
(827 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 104 7e-23
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 104 7e-23
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 104 7e-23
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 104 7e-23
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 104 7e-23
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 104 7e-23
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 104 7e-23
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 104 7e-23
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical pr... 28 7.1
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 104 bits (250), Expect = 7e-23
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = -2
Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
N D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K
Sbjct: 324 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 383
Query: 133 TFMGTLKKDRIRE 95
FMG LK+D + E
Sbjct: 384 AFMGKLKRDFLAE 396
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/83 (59%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = -3
Query: 537 KHRQKKAHNMEIXXNGGTIEDKVKWAREHLEKPIPVDSVFAQ----DCIXXXXXXXXXXX 370
+ RQKKAH +EI NGGTIE KV WAREHLEK + VD+VFAQ D I
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 231
Query: 369 XXRWHTKKLPRKTHKGLRKTTTL 301
RWHTKKLPRKTHKGLRK +
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACI 254
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 104 bits (250), Expect = 7e-23
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = -2
Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
N D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K
Sbjct: 324 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 383
Query: 133 TFMGTLKKDRIRE 95
FMG LK+D + E
Sbjct: 384 AFMGKLKRDFLAE 396
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/83 (59%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = -3
Query: 537 KHRQKKAHNMEIXXNGGTIEDKVKWAREHLEKPIPVDSVFAQ----DCIXXXXXXXXXXX 370
+ RQKKAH +EI NGGTIE KV WAREHLEK + VD+VFAQ D I
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 231
Query: 369 XXRWHTKKLPRKTHKGLRKTTTL 301
RWHTKKLPRKTHKGLRK +
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACI 254
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 104 bits (250), Expect = 7e-23
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = -2
Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
N D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K
Sbjct: 226 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 285
Query: 133 TFMGTLKKDRIRE 95
FMG LK+D + E
Sbjct: 286 AFMGKLKRDFLAE 298
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/83 (59%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = -3
Query: 537 KHRQKKAHNMEIXXNGGTIEDKVKWAREHLEKPIPVDSVFAQ----DCIXXXXXXXXXXX 370
+ RQKKAH +EI NGGTIE KV WAREHLEK + VD+VFAQ D I
Sbjct: 74 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 133
Query: 369 XXRWHTKKLPRKTHKGLRKTTTL 301
RWHTKKLPRKTHKGLRK +
Sbjct: 134 TSRWHTKKLPRKTHKGLRKVACI 156
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 104 bits (250), Expect = 7e-23
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = -2
Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
N D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K
Sbjct: 276 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 335
Query: 133 TFMGTLKKDRIRE 95
FMG LK+D + E
Sbjct: 336 AFMGKLKRDFLAE 348
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -3
Query: 363 RWHTKKLPRKTHKGLRKTTTL 301
RWHTKKLPRKTHKGLRK +
Sbjct: 186 RWHTKKLPRKTHKGLRKVACI 206
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 104 bits (250), Expect = 7e-23
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = -2
Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
N D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K
Sbjct: 324 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 383
Query: 133 TFMGTLKKDRIRE 95
FMG LK+D + E
Sbjct: 384 AFMGKLKRDFLAE 396
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/83 (59%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = -3
Query: 537 KHRQKKAHNMEIXXNGGTIEDKVKWAREHLEKPIPVDSVFAQ----DCIXXXXXXXXXXX 370
+ RQKKAH +EI NGGTIE KV WAREHLEK + VD+VFAQ D I
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 231
Query: 369 XXRWHTKKLPRKTHKGLRKTTTL 301
RWHTKKLPRKTHKGLRK +
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACI 254
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 104 bits (250), Expect = 7e-23
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = -2
Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
N D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K
Sbjct: 226 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 285
Query: 133 TFMGTLKKDRIRE 95
FMG LK+D + E
Sbjct: 286 AFMGKLKRDFLAE 298
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/83 (59%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = -3
Query: 537 KHRQKKAHNMEIXXNGGTIEDKVKWAREHLEKPIPVDSVFAQ----DCIXXXXXXXXXXX 370
+ RQKKAH +EI NGGTIE KV WAREHLEK + VD+VFAQ D I
Sbjct: 74 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 133
Query: 369 XXRWHTKKLPRKTHKGLRKTTTL 301
RWHTKKLPRKTHKGLRK +
Sbjct: 134 TSRWHTKKLPRKTHKGLRKVACI 156
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 104 bits (250), Expect = 7e-23
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = -2
Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
N D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K
Sbjct: 276 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 335
Query: 133 TFMGTLKKDRIRE 95
FMG LK+D + E
Sbjct: 336 AFMGKLKRDFLAE 348
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -3
Query: 363 RWHTKKLPRKTHKGLRKTTTL 301
RWHTKKLPRKTHKGLRK +
Sbjct: 186 RWHTKKLPRKTHKGLRKVACI 206
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 104 bits (250), Expect = 7e-23
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = -2
Query: 313 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 134
N D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K
Sbjct: 324 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 383
Query: 133 TFMGTLKKDRIRE 95
FMG LK+D + E
Sbjct: 384 AFMGKLKRDFLAE 396
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/83 (59%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = -3
Query: 537 KHRQKKAHNMEIXXNGGTIEDKVKWAREHLEKPIPVDSVFAQ----DCIXXXXXXXXXXX 370
+ RQKKAH +EI NGGTIE KV WAREHLEK + VD+VFAQ D I
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 231
Query: 369 XXRWHTKKLPRKTHKGLRKTTTL 301
RWHTKKLPRKTHKGLRK +
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACI 254
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +2
Query: 8 FFFALSNVYFHGRHLRLRSSRWGCGSRSFF--ANTILLE---CTH 127
+F + VY+ R +++ +SRWG S F A+T+L+ C H
Sbjct: 279 YFVCMIYVYYSSRKIQMVASRWGLAFASSFTVASTLLMTTGICAH 323
>Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical
protein R01E6.5 protein.
Length = 245
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 544 KLKTPTKEGSQYGNPT*RWYHRGQSEMGQRTSGETY-PCRFCVCPRLHWXHQ 392
K K EG +YG+ T +Y++G GQ E+Y P + P+ + HQ
Sbjct: 169 KSKYDDNEG-KYGDHTDGYYNKGYDNYGQGHDSESYQPSYYQPKPKYYGGHQ 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,514,728
Number of Sequences: 27780
Number of extensions: 265992
Number of successful extensions: 726
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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