Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_P17
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012726-1|AAH12726.2| 777|Homo sapiens DDX31 protein protein. 62 2e-09
AL354735-1|CAI16564.1| 851|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 62 2e-09
AL160165-2|CAH70531.1| 851|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 62 2e-09
AK027002-1|BAB15620.1| 674|Homo sapiens protein ( Homo sapiens ... 62 2e-09
AK023695-1|BAB14644.1| 556|Homo sapiens protein ( Homo sapiens ... 62 2e-09
AF427339-1|AAL26549.1| 851|Homo sapiens DEAD/DEXH helicase DDX3... 62 2e-09
AF335568-1|AAQ14889.1| 851|Homo sapiens helicain B protein. 62 2e-09
AF335569-1|AAQ14890.1| 758|Homo sapiens helicain C protein. 54 7e-07
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 34 0.77
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 33 1.4
Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein. 31 7.2
AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein. 31 7.2
AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein. 31 7.2
AK023659-1|BAB14630.1| 650|Homo sapiens protein ( Homo sapiens ... 31 7.2
AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein. 31 7.2
>BC012726-1|AAH12726.2| 777|Homo sapiens DDX31 protein protein.
Length = 777
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = -1
Query: 422 AIAXQARLEHTAHSSKEWLARASRAYTSWVRFYSGYPRDVRQYLDPKLLHLGHAAKAFAL 243
A Q E HSS+ ++ A +A S+++ Y+ YPR+++ + LHLGH AK+F L
Sbjct: 616 ATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGL 675
Query: 242 RDTPAALARRTKSDPKLKKERP 177
RD P L+ T+ K +RP
Sbjct: 676 RDAPRNLSALTRKKRKAHVKRP 697
>AL354735-1|CAI16564.1| 851|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 31 protein.
Length = 851
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = -1
Query: 422 AIAXQARLEHTAHSSKEWLARASRAYTSWVRFYSGYPRDVRQYLDPKLLHLGHAAKAFAL 243
A Q E HSS+ ++ A +A S+++ Y+ YPR+++ + LHLGH AK+F L
Sbjct: 690 ATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGL 749
Query: 242 RDTPAALARRTKSDPKLKKERP 177
RD P L+ T+ K +RP
Sbjct: 750 RDAPRNLSALTRKKRKAHVKRP 771
>AL160165-2|CAH70531.1| 851|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 31 protein.
Length = 851
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = -1
Query: 422 AIAXQARLEHTAHSSKEWLARASRAYTSWVRFYSGYPRDVRQYLDPKLLHLGHAAKAFAL 243
A Q E HSS+ ++ A +A S+++ Y+ YPR+++ + LHLGH AK+F L
Sbjct: 690 ATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGL 749
Query: 242 RDTPAALARRTKSDPKLKKERP 177
RD P L+ T+ K +RP
Sbjct: 750 RDAPRNLSALTRKKRKAHVKRP 771
>AK027002-1|BAB15620.1| 674|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23349 fis, clone HEP13913. ).
Length = 674
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = -1
Query: 422 AIAXQARLEHTAHSSKEWLARASRAYTSWVRFYSGYPRDVRQYLDPKLLHLGHAAKAFAL 243
A Q E HSS+ ++ A +A S+++ Y+ YPR+++ + LHLGH AK+F L
Sbjct: 513 ATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGL 572
Query: 242 RDTPAALARRTKSDPKLKKERP 177
RD P L+ T+ K +RP
Sbjct: 573 RDAPRNLSALTRKKRKAHVKRP 594
>AK023695-1|BAB14644.1| 556|Homo sapiens protein ( Homo sapiens
cDNA FLJ13633 fis, clone PLACE1011114, weakly similar to
PROBABLE ATP-DEPENDENT RNA HELICASE HAS1. ).
Length = 556
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = -1
Query: 422 AIAXQARLEHTAHSSKEWLARASRAYTSWVRFYSGYPRDVRQYLDPKLLHLGHAAKAFAL 243
A Q E HSS+ ++ A +A S+++ Y+ YPR+++ + LHLGH AK+F L
Sbjct: 395 ATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGL 454
Query: 242 RDTPAALARRTKSDPKLKKERP 177
RD P L+ T+ K +RP
Sbjct: 455 RDAPRNLSALTRKKRKAHVKRP 476
>AF427339-1|AAL26549.1| 851|Homo sapiens DEAD/DEXH helicase DDX31
protein.
Length = 851
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = -1
Query: 422 AIAXQARLEHTAHSSKEWLARASRAYTSWVRFYSGYPRDVRQYLDPKLLHLGHAAKAFAL 243
A Q E HSS+ ++ A +A S+++ Y+ YPR+++ + LHLGH AK+F L
Sbjct: 690 ATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGL 749
Query: 242 RDTPAALARRTKSDPKLKKERP 177
RD P L+ T+ K +RP
Sbjct: 750 RDAPRNLSALTRKKRKAHVKRP 771
>AF335568-1|AAQ14889.1| 851|Homo sapiens helicain B protein.
Length = 851
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = -1
Query: 422 AIAXQARLEHTAHSSKEWLARASRAYTSWVRFYSGYPRDVRQYLDPKLLHLGHAAKAFAL 243
A Q E HSS+ ++ A +A S+++ Y+ YPR+++ + LHLGH AK+F L
Sbjct: 690 ATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGL 749
Query: 242 RDTPAALARRTKSDPKLKKERP 177
RD P L+ T+ K +RP
Sbjct: 750 RDAPRNLSALTRKKRKAHVKRP 771
>AF335569-1|AAQ14890.1| 758|Homo sapiens helicain C protein.
Length = 758
Score = 54.0 bits (124), Expect = 7e-07
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = -1
Query: 380 SKEWLARASRAYTSWVRFYSGYPRDVRQYLDPKLLHLGHAAKAFALRDTPAALARRTKSD 201
S WL S S+++ Y+ YPR+++ + LHLGH AK+F LRD P L+ T+
Sbjct: 632 STRWLLTKS-TLQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPRNLSALTRKK 690
Query: 200 PKLKKERP 177
K +RP
Sbjct: 691 RKAHVKRP 698
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 33.9 bits (74), Expect = 0.77
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 4/106 (3%)
Frame = -2
Query: 424 PPSRYKPASNTPRTAQRNGSLGPVERTHHGCGFT--RATLATCVSTWIPNCC--TSVTRL 257
P + +PA TP+ A N P T T + T P T+ T L
Sbjct: 658 PTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTL 717
Query: 256 KPSL*ETPLRPSPGELSPILN*RKRDPSTDLQSTTKKKGRGLASPK 119
K TP +P+P EL+P ++D + T KG +PK
Sbjct: 718 KEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPK 763
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 33.1 bits (72), Expect = 1.4
Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
Frame = -2
Query: 424 PPSRYKPASNTPRTAQRNGSLGPVERTHHGCGFT--RATLATCVSTWIPNCC--TSVTRL 257
P + +PA TP+ A N P T T + T P T+ T L
Sbjct: 658 PTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTL 717
Query: 256 KPSL*ETPLRPSPGELSPILN*RKRDPSTDLQSTTKKKGRGLASPK 119
K TP +P+P EL+P + D + T KG +PK
Sbjct: 718 KEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPK 763
>Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = -1
Query: 185 ERPVNRLTVHDEEERKRPGFPKVKIGFNSRVMNKQSSMHTASEFDSGLPPLENS 24
ER V+++ EE+ KRP + +G++ ++ +++S M +EF PP N+
Sbjct: 1145 ERRVHKIC--QEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA 1196
>AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = -1
Query: 185 ERPVNRLTVHDEEERKRPGFPKVKIGFNSRVMNKQSSMHTASEFDSGLPPLENS 24
ER V+++ EE+ KRP + +G++ ++ +++S M +EF PP N+
Sbjct: 1145 ERRVHKIC--QEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA 1196
>AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = -1
Query: 185 ERPVNRLTVHDEEERKRPGFPKVKIGFNSRVMNKQSSMHTASEFDSGLPPLENS 24
ER V+++ EE+ KRP + +G++ ++ +++S M +EF PP N+
Sbjct: 1145 ERRVHKIC--QEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA 1196
>AK023659-1|BAB14630.1| 650|Homo sapiens protein ( Homo sapiens
cDNA FLJ13597 fis, clone PLACE1009798, weakly similar to
RLR1 PROTEIN. ).
Length = 650
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = -1
Query: 185 ERPVNRLTVHDEEERKRPGFPKVKIGFNSRVMNKQSSMHTASEFDSGLPPLENS 24
ER V+++ EE+ KRP + +G++ ++ +++S M +EF PP N+
Sbjct: 518 ERRVHKIC--QEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA 569
>AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein.
Length = 1478
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = -1
Query: 185 ERPVNRLTVHDEEERKRPGFPKVKIGFNSRVMNKQSSMHTASEFDSGLPPLENS 24
ER V+++ EE+ KRP + +G++ ++ +++S M +EF PP N+
Sbjct: 1030 ERRVHKIC--QEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA 1081
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,041,567
Number of Sequences: 237096
Number of extensions: 1920985
Number of successful extensions: 5022
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5022
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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