Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_O06
         (810 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104911-1|AAI04912.1|  620|Homo sapiens GLIS family zinc finger...    32   2.1  
BC101799-1|AAI01800.1|  620|Homo sapiens GLIS family zinc finger...    32   2.1  
AL591720-1|CAH72026.1|  620|Homo sapiens GLIS family zinc finger...    32   2.1  
AK093474-1|BAC04178.1|  368|Homo sapiens protein ( Homo sapiens ...    32   2.1  
AK090634-1|BAC03494.1|  620|Homo sapiens protein ( Homo sapiens ...    32   2.1  
AC080162-1|AAY14856.1|  635|Homo sapiens unknown protein.              32   2.8  
AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.             32   2.8  

>BC104911-1|AAI04912.1|  620|Homo sapiens GLIS family zinc finger 1
           protein.
          Length = 620

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -3

Query: 724 PLCIKPPSPCDXGYINPDHQIPRFHTPTTPRLNIHXHQSPDAVXEGVRAGV 572
           P  I P +    G + P H +P  H P     + H H SP  + E  R G+
Sbjct: 404 PGSITPHNGLASGLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGL 454


>BC101799-1|AAI01800.1|  620|Homo sapiens GLIS family zinc finger 1
           protein.
          Length = 620

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -3

Query: 724 PLCIKPPSPCDXGYINPDHQIPRFHTPTTPRLNIHXHQSPDAVXEGVRAGV 572
           P  I P +    G + P H +P  H P     + H H SP  + E  R G+
Sbjct: 404 PGSITPHNGLASGLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGL 454


>AL591720-1|CAH72026.1|  620|Homo sapiens GLIS family zinc finger 1
           protein.
          Length = 620

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -3

Query: 724 PLCIKPPSPCDXGYINPDHQIPRFHTPTTPRLNIHXHQSPDAVXEGVRAGV 572
           P  I P +    G + P H +P  H P     + H H SP  + E  R G+
Sbjct: 404 PGSITPHNGLASGLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGL 454


>AK093474-1|BAC04178.1|  368|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36155 fis, clone TESTI2025499, moderately
           similar to ZINC FINGER PROTEIN GLI3. ).
          Length = 368

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -3

Query: 724 PLCIKPPSPCDXGYINPDHQIPRFHTPTTPRLNIHXHQSPDAVXEGVRAGV 572
           P  I P +    G + P H +P  H P     + H H SP  + E  R G+
Sbjct: 152 PGSITPHNGLASGLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGL 202


>AK090634-1|BAC03494.1|  620|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33315 fis, clone BNGH42007037, moderately
           similar to ZINC FINGER PROTEIN GLI1 (GLI). ).
          Length = 620

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -3

Query: 724 PLCIKPPSPCDXGYINPDHQIPRFHTPTTPRLNIHXHQSPDAVXEGVRAGV 572
           P  I P +    G + P H +P  H P     + H H SP  + E  R G+
Sbjct: 404 PGSITPHNGLASGLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGL 454


>AC080162-1|AAY14856.1|  635|Homo sapiens unknown protein.
          Length = 635

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 22/66 (33%), Positives = 28/66 (42%)
 Frame = -1

Query: 687 GTSTRIIKSPDSIHQPPPDLTSIXINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMX 508
           G+  R    P ++H P P L     NPLTP      P  K P   EA S    P+  G+ 
Sbjct: 444 GSRQRSSSDPPAVHPPLPPLRVTSTNPLTP--TPPPPVAKTPSVMEALSQPSKPAPPGIS 501

Query: 507 KGVSPP 490
           +   PP
Sbjct: 502 QIRPPP 507


>AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.
          Length = 1022

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 22/66 (33%), Positives = 28/66 (42%)
 Frame = -1

Query: 687  GTSTRIIKSPDSIHQPPPDLTSIXINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMX 508
            G+  R    P ++H P P L     NPLTP      P  K P   EA S    P+  G+ 
Sbjct: 831  GSRQRSSSDPPAVHPPLPPLRVTSTNPLTP--TPPPPVAKTPSVMEALSQPSKPAPPGIS 888

Query: 507  KGVSPP 490
            +   PP
Sbjct: 889  QIRPPP 894


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,803,710
Number of Sequences: 237096
Number of extensions: 2406277
Number of successful extensions: 6439
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6425
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)