Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_N12
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...   119   4e-29
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...   119   4e-29
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    31   0.010
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   8.1  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score =  119 bits (286), Expect = 4e-29
 Identities = 61/138 (44%), Positives = 88/138 (63%)
 Frame = -2

Query: 521 ICLMPGMTLHRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGL 342
           I L  G+T+HRNSA QAGVG IFDRVLSEL  KMR ++MD+ E   L++IIL NP+V+GL
Sbjct: 290 IVLATGITVHRNSAQQAGVGTIFDRVLSELVSKMREMKMDRTELGCLRSIILFNPEVRGL 349

Query: 341 KNKQEVDVLREKMFLCLDEYCRRSRGGEEGXXXXXXXXXXXXRSISLKSFEHLYLFHLVA 162
           K+ QEV +LREK++  L+ YCR +   + G            RSI LK  E+L+ F ++ 
Sbjct: 350 KSIQEVTLLREKIYGALEGYCRVAWPDDAGRFAKLLLRLPAIRSIGLKCLEYLFFFKMIG 409

Query: 161 EGSVSSYIRDALCNHAPP 108
           +  +  ++ + L + + P
Sbjct: 410 DVPIDDFLVEMLESRSDP 427



 Score = 24.2 bits (50), Expect = 1.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 654 DDQILLIKGSWNE 616
           +DQ+LL++  WNE
Sbjct: 261 EDQVLLLRAGWNE 273


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score =  119 bits (286), Expect = 4e-29
 Identities = 61/138 (44%), Positives = 88/138 (63%)
 Frame = -2

Query: 521 ICLMPGMTLHRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGL 342
           I L  G+T+HRNSA QAGVG IFDRVLSEL  KMR ++MD+ E   L++IIL NP+V+GL
Sbjct: 290 IVLATGITVHRNSAQQAGVGTIFDRVLSELVSKMREMKMDRTELGCLRSIILFNPEVRGL 349

Query: 341 KNKQEVDVLREKMFLCLDEYCRRSRGGEEGXXXXXXXXXXXXRSISLKSFEHLYLFHLVA 162
           K+ QEV +LREK++  L+ YCR +   + G            RSI LK  E+L+ F ++ 
Sbjct: 350 KSIQEVTLLREKIYGALEGYCRVAWPDDAGRFAKLLLRLPAIRSIGLKCLEYLFFFKMIG 409

Query: 161 EGSVSSYIRDALCNHAPP 108
           +  +  ++ + L + + P
Sbjct: 410 DVPIDDFLVEMLESRSDP 427



 Score = 24.2 bits (50), Expect = 1.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 654 DDQILLIKGSWNE 616
           +DQ+LL++  WNE
Sbjct: 261 EDQVLLLRAGWNE 273


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 31.5 bits (68), Expect = 0.010
 Identities = 18/74 (24%), Positives = 37/74 (50%)
 Frame = -2

Query: 524 LICLMPGMTLHRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKG 345
           +ICL  G  L R S   +   +     + + + ++ SLR+  AE     +++++  D  G
Sbjct: 294 MICLN-GQVLKRESIHNSSNARFLMDSMFDFAERVNSLRLSDAELGLFCSVVVIAADRPG 352

Query: 344 LKNKQEVDVLREKM 303
           L+N + V+ +  K+
Sbjct: 353 LRNTELVERMHNKL 366


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 108 HRHQHHVGGLIQLLNVDMPTSTCKFYTATV 19
           H H HH    +Q L+   P +  + Y++ V
Sbjct: 351 HHHHHHQTQSLQHLHYRQPPTLSESYSSYV 380


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 433 SSESTRSKICPTPACSAELRCS 498
           S+  T S++CPTP  S  L+ S
Sbjct: 373 SNGQTHSQLCPTPR-STHLKVS 393


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,311
Number of Sequences: 438
Number of extensions: 3146
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)