Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_N03
(814 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X83467-1|CAA58470.1| 660|Homo sapiens 70kD peroxisomal integral... 67 6e-11
X58528-1|CAA41416.1| 659|Homo sapiens 70kDa peroxisomal membran... 67 6e-11
M81182-1|AAA60128.1| 659|Homo sapiens 70kDa peroxisomal membran... 67 6e-11
AL138758-1|CAC15960.2| 659|Homo sapiens ATP-binding cassette, s... 67 6e-11
BC033085-1|AAH33085.1| 542|Homo sapiens TESK2 protein protein. 39 0.019
AL451136-3|CAI13093.1| 571|Homo sapiens testis-specific kinase ... 39 0.019
AL451136-2|CAI13092.1| 542|Homo sapiens testis-specific kinase ... 39 0.019
AL359540-13|CAI21724.1| 571|Homo sapiens testis-specific kinase... 39 0.019
AL359540-12|CAI21723.1| 542|Homo sapiens testis-specific kinase... 39 0.019
AJ132545-1|CAB41970.1| 555|Homo sapiens protein kinase protein. 39 0.019
AB057597-1|BAB62909.1| 571|Homo sapiens testicular protein kina... 39 0.019
BC104903-1|AAI04904.1| 740|Homo sapiens ATP-binding cassette, s... 38 0.043
BC104901-1|AAI04902.1| 740|Homo sapiens ATP-binding cassette, s... 38 0.043
AJ000327-1|CAA03994.1| 740|Homo sapiens adrenoleukodystrophy re... 38 0.043
AF119831-1|AAD30439.1| 740|Homo sapiens adrenoleukodystrophy-re... 38 0.043
BC067130-1|AAH67130.1| 626|Homo sapiens TESK1 protein protein. 37 0.075
BC038448-1|AAH38448.1| 626|Homo sapiens TESK1 protein protein. 37 0.075
AL357874-1|CAI13441.1| 626|Homo sapiens testis-specific kinase ... 37 0.075
D50863-1|BAA09459.1| 626|Homo sapiens TESK1 protein. 36 0.17
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 33 1.6
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 33 1.6
Z86062-2|CAI19455.1| 766|Homo sapiens single-minded homolog 1 (... 31 3.7
U70212-1|AAB62395.1| 766|Homo sapiens hSIM1 protein. 31 3.7
AL121948-1|CAI20423.1| 766|Homo sapiens single-minded homolog 1... 31 3.7
AL603750-2|CAH72670.1| 785|Homo sapiens synapse defective 1, Rh... 31 6.5
AL603750-1|CAH72669.1| 1116|Homo sapiens synapse defective 1, Rh... 31 6.5
AK023877-1|BAB14711.1| 560|Homo sapiens protein ( Homo sapiens ... 31 6.5
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 30 8.7
AL663074-9|CAI23392.1| 437|Homo sapiens novel protein protein. 30 8.7
AL663074-8|CAI23391.1| 339|Homo sapiens novel protein protein. 30 8.7
AK124869-1|BAC85974.1| 339|Homo sapiens protein ( Homo sapiens ... 30 8.7
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 8.7
AB067470-1|BAB67776.1| 1480|Homo sapiens KIAA1883 protein protein. 30 8.7
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 8.7
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 30 8.7
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 30 8.7
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 8.7
>X83467-1|CAA58470.1| 660|Homo sapiens 70kD peroxisomal integral
membrane protein protein.
Length = 660
Score = 67.3 bits (157), Expect = 6e-11
Identities = 28/55 (50%), Positives = 44/55 (80%)
Frame = -2
Query: 606 SEVFKHYYTYGRMLVKMAEGIGRIVLSGRELSKLAGLTSRVTQLRVVLDDIKQGQ 442
SE+ + YY GRML++M++ +GRIVL+GRE+++LAG T+R+T+L VL D+ G+
Sbjct: 351 SELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGK 405
>X58528-1|CAA41416.1| 659|Homo sapiens 70kDa peroxisomal membrane
protein protein.
Length = 659
Score = 67.3 bits (157), Expect = 6e-11
Identities = 28/55 (50%), Positives = 44/55 (80%)
Frame = -2
Query: 606 SEVFKHYYTYGRMLVKMAEGIGRIVLSGRELSKLAGLTSRVTQLRVVLDDIKQGQ 442
SE+ + YY GRML++M++ +GRIVL+GRE+++LAG T+R+T+L VL D+ G+
Sbjct: 351 SELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGK 405
>M81182-1|AAA60128.1| 659|Homo sapiens 70kDa peroxisomal membrane
protein protein.
Length = 659
Score = 67.3 bits (157), Expect = 6e-11
Identities = 28/55 (50%), Positives = 44/55 (80%)
Frame = -2
Query: 606 SEVFKHYYTYGRMLVKMAEGIGRIVLSGRELSKLAGLTSRVTQLRVVLDDIKQGQ 442
SE+ + YY GRML++M++ +GRIVL+GRE+++LAG T+R+T+L VL D+ G+
Sbjct: 351 SELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGK 405
>AL138758-1|CAC15960.2| 659|Homo sapiens ATP-binding cassette,
sub-family D (ALD), member 3 protein.
Length = 659
Score = 67.3 bits (157), Expect = 6e-11
Identities = 28/55 (50%), Positives = 44/55 (80%)
Frame = -2
Query: 606 SEVFKHYYTYGRMLVKMAEGIGRIVLSGRELSKLAGLTSRVTQLRVVLDDIKQGQ 442
SE+ + YY GRML++M++ +GRIVL+GRE+++LAG T+R+T+L VL D+ G+
Sbjct: 351 SELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGK 405
>BC033085-1|AAH33085.1| 542|Homo sapiens TESK2 protein protein.
Length = 542
Score = 39.1 bits (87), Expect = 0.019
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2
Query: 705 RVTGSXCTAXRTAVXALYPFDDFVLEKIGTGFFSEVFK 592
RV S A +A L DDF EKIG+GFFSEVFK
Sbjct: 37 RVWPSSYRALISAFSRLTRLDDFTCEKIGSGFFSEVFK 74
>AL451136-3|CAI13093.1| 571|Homo sapiens testis-specific kinase 2
protein.
Length = 571
Score = 39.1 bits (87), Expect = 0.019
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2
Query: 705 RVTGSXCTAXRTAVXALYPFDDFVLEKIGTGFFSEVFK 592
RV S A +A L DDF EKIG+GFFSEVFK
Sbjct: 37 RVWPSSYRALISAFSRLTRLDDFTCEKIGSGFFSEVFK 74
>AL451136-2|CAI13092.1| 542|Homo sapiens testis-specific kinase 2
protein.
Length = 542
Score = 39.1 bits (87), Expect = 0.019
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2
Query: 705 RVTGSXCTAXRTAVXALYPFDDFVLEKIGTGFFSEVFK 592
RV S A +A L DDF EKIG+GFFSEVFK
Sbjct: 37 RVWPSSYRALISAFSRLTRLDDFTCEKIGSGFFSEVFK 74
>AL359540-13|CAI21724.1| 571|Homo sapiens testis-specific kinase 2
protein.
Length = 571
Score = 39.1 bits (87), Expect = 0.019
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2
Query: 705 RVTGSXCTAXRTAVXALYPFDDFVLEKIGTGFFSEVFK 592
RV S A +A L DDF EKIG+GFFSEVFK
Sbjct: 37 RVWPSSYRALISAFSRLTRLDDFTCEKIGSGFFSEVFK 74
>AL359540-12|CAI21723.1| 542|Homo sapiens testis-specific kinase 2
protein.
Length = 542
Score = 39.1 bits (87), Expect = 0.019
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2
Query: 705 RVTGSXCTAXRTAVXALYPFDDFVLEKIGTGFFSEVFK 592
RV S A +A L DDF EKIG+GFFSEVFK
Sbjct: 37 RVWPSSYRALISAFSRLTRLDDFTCEKIGSGFFSEVFK 74
>AJ132545-1|CAB41970.1| 555|Homo sapiens protein kinase protein.
Length = 555
Score = 39.1 bits (87), Expect = 0.019
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2
Query: 705 RVTGSXCTAXRTAVXALYPFDDFVLEKIGTGFFSEVFK 592
RV S A +A L DDF EKIG+GFFSEVFK
Sbjct: 37 RVWPSSYRALISAFSRLTRLDDFTCEKIGSGFFSEVFK 74
>AB057597-1|BAB62909.1| 571|Homo sapiens testicular protein kinase
2 protein.
Length = 571
Score = 39.1 bits (87), Expect = 0.019
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2
Query: 705 RVTGSXCTAXRTAVXALYPFDDFVLEKIGTGFFSEVFK 592
RV S A +A L DDF EKIG+GFFSEVFK
Sbjct: 37 RVWPSSYRALISAFSRLTRLDDFTCEKIGSGFFSEVFK 74
>BC104903-1|AAI04904.1| 740|Homo sapiens ATP-binding cassette,
sub-family D (ALD), member 2 protein.
Length = 740
Score = 37.9 bits (84), Expect = 0.043
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = -2
Query: 606 SEVFKHYYTYGRMLVKMAEGIGRIVLSGRELSKLAGLTSRVTQLRVVLDDIKQG 445
SE + + T +L A+ I RI+ S +E+++LAG T+RV + V D++K+G
Sbjct: 383 SERTEAFTTARNLLASGADAIERIMSSYKEVTELAGYTARVYNMFWVFDEVKRG 436
>BC104901-1|AAI04902.1| 740|Homo sapiens ATP-binding cassette,
sub-family D, member 2 protein.
Length = 740
Score = 37.9 bits (84), Expect = 0.043
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = -2
Query: 606 SEVFKHYYTYGRMLVKMAEGIGRIVLSGRELSKLAGLTSRVTQLRVVLDDIKQG 445
SE + + T +L A+ I RI+ S +E+++LAG T+RV + V D++K+G
Sbjct: 383 SERTEAFTTARNLLASGADAIERIMSSYKEVTELAGYTARVYNMFWVFDEVKRG 436
>AJ000327-1|CAA03994.1| 740|Homo sapiens adrenoleukodystrophy
related protein protein.
Length = 740
Score = 37.9 bits (84), Expect = 0.043
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = -2
Query: 606 SEVFKHYYTYGRMLVKMAEGIGRIVLSGRELSKLAGLTSRVTQLRVVLDDIKQG 445
SE + + T +L A+ I RI+ S +E+++LAG T+RV + V D++K+G
Sbjct: 383 SERTEAFTTARNLLASGADAIERIMSSYKEVTELAGYTARVYNMFWVFDEVKRG 436
>AF119831-1|AAD30439.1| 740|Homo sapiens
adrenoleukodystrophy-related protein protein.
Length = 740
Score = 37.9 bits (84), Expect = 0.043
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = -2
Query: 606 SEVFKHYYTYGRMLVKMAEGIGRIVLSGRELSKLAGLTSRVTQLRVVLDDIKQG 445
SE + + T +L A+ I RI+ S +E+++LAG T+RV + V D++K+G
Sbjct: 383 SERTEAFTTARNLLASGADAIERIMSSYKEVTELAGYTARVYNMFWVFDEVKRG 436
>BC067130-1|AAH67130.1| 626|Homo sapiens TESK1 protein protein.
Length = 626
Score = 37.1 bits (82), Expect = 0.075
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = -2
Query: 681 AXRTAVXALYPFDDF-VLEKIGTGFFSEVFK--HYYTYGRMLVKM 556
A R+AV +L DDF EKIG GFFSEV+K H + M++KM
Sbjct: 43 ALRSAVSSLARVDDFHCAEKIGAGFFSEVYKVRHRQSGQVMVLKM 87
>BC038448-1|AAH38448.1| 626|Homo sapiens TESK1 protein protein.
Length = 626
Score = 37.1 bits (82), Expect = 0.075
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = -2
Query: 681 AXRTAVXALYPFDDF-VLEKIGTGFFSEVFK--HYYTYGRMLVKM 556
A R+AV +L DDF EKIG GFFSEV+K H + M++KM
Sbjct: 43 ALRSAVSSLARVDDFHCAEKIGAGFFSEVYKVRHRQSGQVMVLKM 87
>AL357874-1|CAI13441.1| 626|Homo sapiens testis-specific kinase 1
protein.
Length = 626
Score = 37.1 bits (82), Expect = 0.075
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = -2
Query: 681 AXRTAVXALYPFDDF-VLEKIGTGFFSEVFK--HYYTYGRMLVKM 556
A R+AV +L DDF EKIG GFFSEV+K H + M++KM
Sbjct: 43 ALRSAVSSLARVDDFHCAEKIGAGFFSEVYKVRHRQSGQVMVLKM 87
>D50863-1|BAA09459.1| 626|Homo sapiens TESK1 protein.
Length = 626
Score = 35.9 bits (79), Expect = 0.17
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -2
Query: 675 RTAVXALYPFDDF-VLEKIGTGFFSEVFK--HYYTYGRMLVKM 556
R+AV +L DDF EKIG GFFSEV+K H + M++KM
Sbjct: 45 RSAVSSLARVDDFHCAEKIGAGFFSEVYKVRHRQSGQVMVLKM 87
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 593 NTTTRTVGCWLRWPRGSGGSC-CLVAS*ASWPAS-RPGSR 480
N + RT WL W G C CL AS A W +S RP SR
Sbjct: 119 NKSLRTGSTWLWWWTGCSCGCSCLCASWALWGSSYRPSSR 158
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 593 NTTTRTVGCWLRWPRGSGGSC-CLVAS*ASWPAS-RPGSR 480
N + RT WL W G C CL AS A W +S RP SR
Sbjct: 119 NKSLRTGSTWLWWWTGCSCGCSCLCASWALWGSSYRPSSR 158
>Z86062-2|CAI19455.1| 766|Homo sapiens single-minded homolog 1
(Drosophila) protein.
Length = 766
Score = 31.5 bits (68), Expect = 3.7
Identities = 34/105 (32%), Positives = 37/105 (35%), Gaps = 6/105 (5%)
Frame = -3
Query: 503 PASRPGSRSCASCWTTSNKGNYSRTMVDKTSHSANGENRRIPTRAA-GGVC-GSRTSLKT 330
PA RPGS+ ASC S HS E R T+A GG C R L T
Sbjct: 422 PADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRYFLGT 481
Query: 329 PAAHNRRPTSDRAGAQSGLLRRRDRVDAE----HITSIHPTVPRG 207
P A RA R E HI S+H RG
Sbjct: 482 PQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRG 526
>U70212-1|AAB62395.1| 766|Homo sapiens hSIM1 protein.
Length = 766
Score = 31.5 bits (68), Expect = 3.7
Identities = 34/105 (32%), Positives = 37/105 (35%), Gaps = 6/105 (5%)
Frame = -3
Query: 503 PASRPGSRSCASCWTTSNKGNYSRTMVDKTSHSANGENRRIPTRAA-GGVC-GSRTSLKT 330
PA RPGS+ ASC S HS E R T+A GG C R L T
Sbjct: 422 PADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRYFLGT 481
Query: 329 PAAHNRRPTSDRAGAQSGLLRRRDRVDAE----HITSIHPTVPRG 207
P A RA R E HI S+H RG
Sbjct: 482 PQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRG 526
>AL121948-1|CAI20423.1| 766|Homo sapiens single-minded homolog 1
(Drosophila) protein.
Length = 766
Score = 31.5 bits (68), Expect = 3.7
Identities = 34/105 (32%), Positives = 37/105 (35%), Gaps = 6/105 (5%)
Frame = -3
Query: 503 PASRPGSRSCASCWTTSNKGNYSRTMVDKTSHSANGENRRIPTRAA-GGVC-GSRTSLKT 330
PA RPGS+ ASC S HS E R T+A GG C R L T
Sbjct: 422 PADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRYFLGT 481
Query: 329 PAAHNRRPTSDRAGAQSGLLRRRDRVDAE----HITSIHPTVPRG 207
P A RA R E HI S+H RG
Sbjct: 482 PQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRG 526
>AL603750-2|CAH72670.1| 785|Homo sapiens synapse defective 1, Rho
GTPase, homolog 2 (C. elegans) protein.
Length = 785
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 180 CGAHLS-HHPPPRDGRMDG 233
CGAH PPPR GRMDG
Sbjct: 32 CGAHRDWDEPPPRGGRMDG 50
>AL603750-1|CAH72669.1| 1116|Homo sapiens synapse defective 1, Rho
GTPase, homolog 2 (C. elegans) protein.
Length = 1116
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 180 CGAHLS-HHPPPRDGRMDG 233
CGAH PPPR GRMDG
Sbjct: 32 CGAHRDWDEPPPRGGRMDG 50
>AK023877-1|BAB14711.1| 560|Homo sapiens protein ( Homo sapiens
cDNA FLJ13815 fis, clone THYRO1000381. ).
Length = 560
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 180 CGAHLS-HHPPPRDGRMDG 233
CGAH PPPR GRMDG
Sbjct: 32 CGAHRDWDEPPPRGGRMDG 50
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 30.3 bits (65), Expect = 8.7
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = -3
Query: 503 PASRPGSRSCASCWTTSNKGNYSRTMVDKTSHSANGENR----RIPTRAAGGVCGSRTSL 336
PA PGS S TS ++ R DK SHS R R P A G SRT
Sbjct: 443 PAPAPGSHREISSSPTSKNRSHGRAKRDK-SHSHTPSRRMGRSRSPATAKRGRSRSRTPT 501
Query: 335 KTPAAHNRRP 306
K + +R P
Sbjct: 502 KRGHSRSRSP 511
>AL663074-9|CAI23392.1| 437|Homo sapiens novel protein protein.
Length = 437
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 566 WLRWPRGSGGSCCLVAS 516
W WPRG GG CLV S
Sbjct: 285 WEAWPRGPGGHSCLVES 301
>AL663074-8|CAI23391.1| 339|Homo sapiens novel protein protein.
Length = 339
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 566 WLRWPRGSGGSCCLVAS 516
W WPRG GG CLV S
Sbjct: 187 WEAWPRGPGGHSCLVES 203
>AK124869-1|BAC85974.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ42879 fis, clone BRHIP3001283. ).
Length = 339
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 566 WLRWPRGSGGSCCLVAS 516
W WPRG GG CLV S
Sbjct: 187 WEAWPRGPGGHSCLVES 203
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 30.3 bits (65), Expect = 8.7
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = -3
Query: 503 PASRPGSRSCASCWTTSNKGNYSRTMVDKTSHSANGENR----RIPTRAAGGVCGSRTSL 336
PA PGS S TS ++ R DK SHS R R P A G SRT
Sbjct: 443 PAPAPGSHREISSSPTSKNRSHGRAKRDK-SHSHTPSRRMGRSRSPATAKRGRSRSRTPT 501
Query: 335 KTPAAHNRRP 306
K + +R P
Sbjct: 502 KRGHSRSRSP 511
>AB067470-1|BAB67776.1| 1480|Homo sapiens KIAA1883 protein protein.
Length = 1480
Score = 30.3 bits (65), Expect = 8.7
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -1
Query: 382 SPPARQVGYVGVEPH*KLLPLTTGALPRTGPEPSRGY*DGGTGLTQSTLHPSILPSRGGG 203
+PPA + P +LPL +LP P+PS D T L S H S L G G
Sbjct: 105 TPPAEETSSSQSLPDVYILPLAEVSLPMPAPQPSHS--DMTTPLGLSRQHLSYLQEIGSG 162
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 30.3 bits (65), Expect = 8.7
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = -3
Query: 503 PASRPGSRSCASCWTTSNKGNYSRTMVDKTSHSANGENR----RIPTRAAGGVCGSRTSL 336
PA PGS S TS ++ R DK SHS R R P A G SRT
Sbjct: 443 PAPAPGSHREISSSPTSKNRSHGRAKRDK-SHSHTPSRRMGRSRSPATAKRGRSRSRTPT 501
Query: 335 KTPAAHNRRP 306
K + +R P
Sbjct: 502 KRGHSRSRSP 511
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 30.3 bits (65), Expect = 8.7
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = -3
Query: 503 PASRPGSRSCASCWTTSNKGNYSRTMVDKTSHSANGENR----RIPTRAAGGVCGSRTSL 336
PA PGS S TS ++ R DK SHS R R P A G SRT
Sbjct: 408 PAPAPGSHREISSSPTSKNRSHGRAKRDK-SHSHTPSRRMGRSRSPATAKRGRSRSRTPT 466
Query: 335 KTPAAHNRRP 306
K + +R P
Sbjct: 467 KRGHSRSRSP 476
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 30.3 bits (65), Expect = 8.7
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = -3
Query: 503 PASRPGSRSCASCWTTSNKGNYSRTMVDKTSHSANGENR----RIPTRAAGGVCGSRTSL 336
PA PGS S TS ++ R DK SHS R R P A G SRT
Sbjct: 233 PAPAPGSHREISSSPTSKNRSHGRAKRDK-SHSHTPSRRMGRSRSPATAKRGRSRSRTPT 291
Query: 335 KTPAAHNRRP 306
K + +R P
Sbjct: 292 KRGHSRSRSP 301
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.3 bits (65), Expect = 8.7
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = -3
Query: 503 PASRPGSRSCASCWTTSNKGNYSRTMVDKTSHSANGENR----RIPTRAAGGVCGSRTSL 336
PA PGS S TS ++ R DK SHS R R P A G SRT
Sbjct: 491 PAPAPGSHREISSSPTSKNRSHGRAKRDK-SHSHTPSRRMGRSRSPATAKRGRSRSRTPT 549
Query: 335 KTPAAHNRRP 306
K + +R P
Sbjct: 550 KRGHSRSRSP 559
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,508,694
Number of Sequences: 237096
Number of extensions: 3403182
Number of successful extensions: 8244
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 7486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8241
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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