Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_N03
         (814 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   1.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   1.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   3.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   7.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.8  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 27/117 (23%), Positives = 44/117 (37%)
 Frame = -3

Query: 548 GSGGSCCLVAS*ASWPASRPGSRSCASCWTTSNKGNYSRTMVDKTSHSANGENRRIPTRA 369
           GS   C +    AS      G  SC  C     KG + RT+    S++   E   I  + 
Sbjct: 105 GSKHLCSICGDRAS--GKHYGVYSCEGC-----KGFFKRTVRKDLSYACREEKSCIIDKR 157

Query: 368 AGGVCGSRTSLKTPAAHNRRPTSDRAGAQSGLLRRRDRVDAEHITSIHPTVPRGRVM 198
               C      K  A   +R        ++   + RD+ + E  +S+H  +P  R++
Sbjct: 158 QRNRCQYCRYQKCLAMGMKREAVQEERQRT---KERDQSEVESTSSLHSDMPIERIL 211


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 27/117 (23%), Positives = 44/117 (37%)
 Frame = -3

Query: 548 GSGGSCCLVAS*ASWPASRPGSRSCASCWTTSNKGNYSRTMVDKTSHSANGENRRIPTRA 369
           GS   C +    AS      G  SC  C     KG + RT+    S++   E   I  + 
Sbjct: 105 GSKHLCSICGDRAS--GKHYGVYSCEGC-----KGFFKRTVRKDLSYACREEKSCIIDKR 157

Query: 368 AGGVCGSRTSLKTPAAHNRRPTSDRAGAQSGLLRRRDRVDAEHITSIHPTVPRGRVM 198
               C      K  A   +R        ++   + RD+ + E  +S+H  +P  R++
Sbjct: 158 QRNRCQYCRYQKCLAMGMKREAVQEERQRT---KERDQSEVESTSSLHSDMPIERIL 211


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +1

Query: 697 GHSAVTSL-YHLHSH-LTPYXTHHHST 771
           GHS + +  +H HSH  TP+  H HST
Sbjct: 422 GHSHIHATPHHHHSHAATPH--HQHST 446



 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 724 HLHSHLTPYXTHHHS 768
           H HSH+     HHHS
Sbjct: 421 HGHSHIHATPHHHHS 435


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = -2

Query: 366 RWGMWESNLTKNSCRSQPAPYLGPGRSP 283
           RW  ++  +    C + PA Y    R P
Sbjct: 394 RWFTYQETVDPAGCNAGPAKYYLKSRDP 421


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -1

Query: 763 DDEXDKESGVSEDGKDS*PQSDRLXLHSXENGCXS 659
           D + D+E+   EDG+       RL L    +G  S
Sbjct: 279 DRDDDEENEEEEDGRGQSEAEKRLKLDEDADGAVS 313


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,702
Number of Sequences: 438
Number of extensions: 5933
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)