Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_M12
(841 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 165 5e-42
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 163 3e-41
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 131 1e-31
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 58 2e-09
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 35 0.017
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 33 0.038
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 32 0.12
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 32 0.12
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.15
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 30 0.36
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 30 0.36
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.36
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 1.1
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 29 1.1
SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit Ssr4|Schizos... 28 1.4
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 28 1.4
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.9
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.9
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 27 2.5
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 3.3
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.3
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.4
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.4
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 4.4
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.4
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 27 4.4
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 4.4
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 4.4
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 5.8
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.8
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 26 5.8
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 26 7.6
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 26 7.6
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 7.6
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 7.6
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 165 bits (402), Expect = 5e-42
Identities = 92/196 (46%), Positives = 119/196 (60%)
Frame = -3
Query: 809 PXKXXXXXPTXFXNQTRXIHXXYFEGEXGMDPKXTTXSGKFELTRDPTRRRRGVXQIEVT 630
P K T NQ + FEGE K GKFEL+ P R GV QIEVT
Sbjct: 419 PTKKSEVFSTYADNQPGVL-IQVFEGERART-KDCNLLGKFELSGIPPAPR-GVPQIEVT 475
Query: 629 FRHRCPTVSSTFPISRSPPNKENKITITKDKGRLSKEEIERMVNEXEKYRNEDDKQKETI 450
F + + + + K KITIT DKGRLSKEEI+RMV+E EKY+ ED+ + I
Sbjct: 476 FDVDANGILNVSALEKGT-GKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRI 534
Query: 449 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 270
QAKN LESY +S++++++D LK+K+ SDK+ I +TI+WLD N A K+EYE KQ
Sbjct: 535 QAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQ 594
Query: 269 KELEGICNPIITKMYQ 222
KELEG+ NPI+ K+YQ
Sbjct: 595 KELEGVANPIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 163 bits (396), Expect = 3e-41
Identities = 91/196 (46%), Positives = 119/196 (60%)
Frame = -3
Query: 809 PXKXXXXXPTXFXNQTRXIHXXYFEGEXGMDPKXTTXSGKFELTRDPTRRRRGVXQIEVT 630
P K T NQ + FEGE K GKFEL+ P R GV QIEVT
Sbjct: 419 PTKKSEIFSTYSDNQPGVL-IQVFEGERART-KDCNLLGKFELSGIPPAPR-GVPQIEVT 475
Query: 629 FRHRCPTVSSTFPISRSPPNKENKITITKDKGRLSKEEIERMVNEXEKYRNEDDKQKETI 450
F + + + + K KITIT DKGRLSKEEI+RMV E EKY+ ED+ + I
Sbjct: 476 FDVDANGILNVSALEKGT-GKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRI 534
Query: 449 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 270
QAKN LESY +S++++++D LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQ
Sbjct: 535 QAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQ 594
Query: 269 KELEGICNPIITKMYQ 222
KELE + NPI+ K+YQ
Sbjct: 595 KELESVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 131 bits (316), Expect = 1e-31
Identities = 76/197 (38%), Positives = 109/197 (55%), Gaps = 2/197 (1%)
Frame = -3
Query: 809 PXKXXXXXPTXFXNQTRXIHXXYFEGEXGMDPKXTTXSGKFELTRDPTRRRRGVXQIEVT 630
P + T NQ + Y EGE + K GKF+L P R GV QIEVT
Sbjct: 448 PTRKSQIFSTAVDNQNTVLIQVY-EGERTLT-KDNNLLGKFDLRGIPPAPR-GVPQIEVT 504
Query: 629 FRHRCPTVSSTFPISRSPPNKENKITITKDKGRLSKEEIERMVNEXEKYRNEDDKQKETI 450
F V + + +S K K+ I DKGRLS+E+IERMV E E++ ED KE I
Sbjct: 505 FEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERI 564
Query: 449 QAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEH 276
+A+N LE+Y +S+K +DE+L K+ DKQ +LD D +WL+ + A KEE+E
Sbjct: 565 EARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFED 624
Query: 275 KQKELEGICNPIITKMY 225
++++L+ + +PI K+Y
Sbjct: 625 QRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 58.0 bits (134), Expect = 2e-09
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 2/198 (1%)
Frame = -3
Query: 809 PXKXXXXXPTXFXNQTRXIHXXYFEGEXGMDPKXTTXSGKFELTRDPTRRRRGVXQIEVT 630
P + T QT + F+GE + + G F+LT +G QIEV+
Sbjct: 462 PTRKSQVFSTAADGQTA-VEIRVFQGEREL-VRDNKLIGNFQLT-GIAPAPKGQPQIEVS 518
Query: 629 FRHRCPTVSSTFPISRSPPNKENKITITKDKGRLSKEEIERMVNEXEKYRNEDDKQKETI 450
F + + ++ NK++ IT+ G L+ EIE MV + EKYR D +KE I
Sbjct: 519 FDVDADGIINVSARDKAT-NKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAI 576
Query: 449 QAKNALESYCFSMKSTME--DEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEH 276
+ N ES C ++S ++ +KL ++ + + I D K ++ E+ +
Sbjct: 577 ENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKK 636
Query: 275 KQKELEGICNPIITKMYQ 222
K E++ + + +Y+
Sbjct: 637 KIDEIQQLSLKVFESVYK 654
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 34.7 bits (76), Expect = 0.017
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = -3
Query: 557 ITITKDKGRLSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMED--EKL 384
++++ + RL E +E+ + D ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAPF 601
Query: 383 KEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGICNPI 240
+ S + +L K D WL + + K Y K ++L + PI
Sbjct: 602 TNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 33.5 bits (73), Expect = 0.038
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Frame = -3
Query: 593 PISRSPPNKENKITITKDKGRLSKEEIERMVNEX-EKYRNEDDKQKETIQAKNALESYCF 417
P+ + P K K + ++ +E E EK ++ K + KNA ++
Sbjct: 72 PVKKKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDALAD 131
Query: 416 SMKSTMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEYEHKQKE 264
M DE+ E S K+ K +D + LD + E+ + K+K+
Sbjct: 132 DMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.9 bits (69), Expect = 0.12
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = -3
Query: 572 NKENKITITKDKGRLSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 393
NK+ K T +D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 392 EKLKEKISD 366
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 31.9 bits (69), Expect = 0.12
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = -3
Query: 617 CPTVSSTFPISRSPPN-KENKITITKDKGRLSKEEIERMVNEXEKYRNE-DDKQKETIQA 444
C V I ++ N +EN++T K KG+ EE + ++ E R + +++T+
Sbjct: 267 CEHVEKAAEILKNVLNERENEVTDKKGKGKQKAEE-STLTSDLENLREMLSELEQKTLDL 325
Query: 443 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 342
K+ S ++ S M + L K S S Q + +
Sbjct: 326 KHGAPSLEEAVMSKMHESSLLSKDSSSLAQAVAE 359
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.15
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -3
Query: 539 KGRLSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 360
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 359 KQTILDKCNDTIK 321
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 30.3 bits (65), Expect = 0.36
Identities = 14/61 (22%), Positives = 34/61 (55%)
Frame = -3
Query: 521 EEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 342
EE++ +NE +K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 341 K 339
K
Sbjct: 79 K 79
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 30.3 bits (65), Expect = 0.36
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = -3
Query: 575 PNKENKITITKDKGRLSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTME 396
P+ + I +T+ + R S E V + E ++D + +++NA + S +
Sbjct: 234 PDLSSLIRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLS 291
Query: 395 DEKLKEKISDSDKQTILDKCNDTIK 321
+ +KEK S +K DK + K
Sbjct: 292 ESSMKEKQSKIEKYMKSDKSSKNFK 316
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.36
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = -3
Query: 527 SKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 348
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 347 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 258
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 383 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 258
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 28.7 bits (61), Expect = 1.1
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Frame = -3
Query: 584 RSPPNKENKITITKDKGRLSKEEIERMVNEXEKY--RNEDDKQKETIQAK-NALESYCFS 414
+ P N+IT T+D S++E + N D + + A + + S
Sbjct: 16 KKPNESSNRITFTEDDSSSSEQEHAPIPNSFSSQITAASDASKDDNYDASIYGFDEFYDS 75
Query: 413 MKSTMEDEKLKEKISDSDKQ-TILDKCNDTIKWLDSNQLADKEEYEHKQKELEG 255
MKS ++ +++ D++ ++ ++ K + L +E K+ ELEG
Sbjct: 76 MKSAEREQMELKRLESKDRRPKYMENLIESAKKRKRDLLLARERALLKKNELEG 129
>SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit
Ssr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = -3
Query: 578 PPNKENKITITKDKGRLSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTM 399
PP + ++ G+ K+ E++V + +KY++ T N L+ + ++KS
Sbjct: 310 PPALWQEPNSMEELGKELKDNKEQLVKQDQKYQSLQGDLSYTDSMSNLLKEFS-NIKSAE 368
Query: 398 EDEKLKEKISD 366
E + L++KI +
Sbjct: 369 ECDVLQKKIEE 379
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -3
Query: 560 KITITK-DKGRLSKEEIERMVNEXEKYRNEDDKQ-KETIQAKNAL 432
K+ I+K + KEE+E+ + +K RNE+ K+ KET+ NAL
Sbjct: 671 KVEISKPSEEEDKKEEVEK--KDGDKERNEEKKEEKETLPVLNAL 713
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -3
Query: 521 EEIERMVNEXEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 345
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 344 DKCNDTIKWLDSNQLADKEEYEHKQK 267
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 27.9 bits (59), Expect = 1.9
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = -3
Query: 608 VSSTFPIS-RSPPNKENKITITKDKGRLS--KEEIERMVNEXEKYRNEDDKQKE 456
V+ P+S +S P+K ++ T K+K +++ KE+ ER NE E+ N +DK E
Sbjct: 86 VNKAIPVSFKSGPSKIDEFTDKKEKKKIAKRKEKRERDWNEIEE--NFEDKTWE 137
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.5 bits (58), Expect = 2.5
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = -3
Query: 539 KGRLSKEEIERMVN---EXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 369
KG+ K+ +E N E EK + +A+ A + +E EK KEK
Sbjct: 221 KGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQK 280
Query: 368 DSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 258
D D++ DT+ D NQ+ +E E QKE++
Sbjct: 281 DKDQE------QDTVS--DKNQI---DEIEKGQKEVD 306
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 539 KGRLSKEEIERMVNEXEKYRNEDD 468
KG LSKEE+ER V + K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 506 MVNEXEKYRNEDDKQKETIQAKNALESYCFSMKST 402
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.6 bits (56), Expect = 4.4
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -3
Query: 524 KEEIERMVNEXEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 372
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 371 SDSDKQTILDKCND 330
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 521 EEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 351
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.6 bits (56), Expect = 4.4
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = -3
Query: 533 RLSKEEIERMVNEXEKYRNEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDK 357
+L++E +ER+ E ++YR + + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 356 QTILDKCNDTIKWLDSNQLAD--KEEYEHKQKE 264
+T + + K L +N+L+ E +H +KE
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKE 1041
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -3
Query: 476 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 315
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.6 bits (56), Expect = 4.4
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -3
Query: 557 ITITKD-KGRLSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 381
I + +D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 380 EKISDSDKQTILDKC 336
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 590 ISRSPPNKENKITITKDKGRLSKEEIERMVNEXEKYRNEDDKQKE 456
+ RS ENK+ I K +E+++R+ +E RNE + +E
Sbjct: 850 VKRSLLKYENKLQIIKSSSSGLEEQMQRINSEISDKRNELESLEE 894
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -3
Query: 527 SKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKS 405
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.2 bits (55), Expect = 5.8
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -3
Query: 503 VNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 324
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 323 KWLDSNQLADKEEYEHKQKELEGICNPI 240
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 214 EESPEVCRASRAEHPEPE 161
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 26.2 bits (55), Expect = 5.8
Identities = 19/100 (19%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Frame = -3
Query: 566 ENKITITKDKGRLSK-EEIERMVNEXEKYRNEDDKQKETIQAKNAL------ESYCFSMK 408
EN++ I L K +++ R ++ +N+++ +++ A + L ++ +
Sbjct: 800 ENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFR 859
Query: 407 STMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 288
+DEKLK+ D ++ N+ + D ++D E
Sbjct: 860 KFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFE 899
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 7.6
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = -3
Query: 605 SSTFPISRSPPNKENKITITKDKGRLSKEEIERMVNEXEKYRNEDDKQKETIQAKNALES 426
S T S S P+ E + DK + E+I + ++Y NED+ + +++ A S
Sbjct: 381 SKTTKHSTSLPSTE---PVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPAAVS 437
Query: 425 YCFSMKSTMEDEKLKEKISDSD 360
+ ++ +T++ + KI +S+
Sbjct: 438 FS-TITNTIQAKYSNRKIKNSN 458
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -3
Query: 659 RRGVXQIEVTFR---HRCPTVSSTFPISRSPPNKENKITITKDKGRLSKEEIERMVN 498
+R Q + T+R H T+ S PISR + N+I K R++ E+ +V+
Sbjct: 240 KRACSQTDGTYRSYVHNPSTLLSILPISRELNSLLNRIFDRNPKTRITLPELSTLVS 296
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 7.6
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 473 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 297
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 296 DK 291
DK
Sbjct: 238 DK 239
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -3
Query: 524 KEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 345
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 344 D 342
D
Sbjct: 451 D 451
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,905,265
Number of Sequences: 5004
Number of extensions: 57392
Number of successful extensions: 285
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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