Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_M09
(822 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 298 7e-81
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 298 7e-81
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 298 7e-81
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 298 7e-81
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 298 7e-81
AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-P... 30 4.4
AY395750-1|AAR89513.1| 1199|Drosophila melanogaster ATM protein ... 29 7.7
AY113192-1|AAM29197.1| 574|Drosophila melanogaster AT01448p pro... 29 7.7
AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB... 29 7.7
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 298 bits (731), Expect = 7e-81
Identities = 137/163 (84%), Positives = 147/163 (90%)
Frame = -3
Query: 580 RSYPVRHXKGLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 401
+ P + KGLRKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 249 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 308
Query: 400 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 221
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR
Sbjct: 309 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 368
Query: 220 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 92
+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 369 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411
Score = 106 bits (254), Expect = 4e-23
Identities = 50/78 (64%), Positives = 58/78 (74%)
Frame = -2
Query: 785 VKQXQKKAYIMESXLTGVPSRTK*NGPREHXEKPIPVDSVFAQDEMXDCIGVTQGAKGYK 606
+KQ QKKA++ME L G K REH EKPI V +VF QDEM DC+GVT+G KG+K
Sbjct: 182 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG-KGFK 240
Query: 605 GVTSRWHTKKLPRKTXQG 552
GVTSRWHTKKLPRKT +G
Sbjct: 241 GVTSRWHTKKLPRKTHKG 258
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 298 bits (731), Expect = 7e-81
Identities = 137/163 (84%), Positives = 147/163 (90%)
Frame = -3
Query: 580 RSYPVRHXKGLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 401
+ P + KGLRKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 297
Query: 400 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 221
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR
Sbjct: 298 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 357
Query: 220 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 92
+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 358 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
Score = 106 bits (254), Expect = 4e-23
Identities = 50/78 (64%), Positives = 58/78 (74%)
Frame = -2
Query: 785 VKQXQKKAYIMESXLTGVPSRTK*NGPREHXEKPIPVDSVFAQDEMXDCIGVTQGAKGYK 606
+KQ QKKA++ME L G K REH EKPI V +VF QDEM DC+GVT+G KG+K
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG-KGFK 229
Query: 605 GVTSRWHTKKLPRKTXQG 552
GVTSRWHTKKLPRKT +G
Sbjct: 230 GVTSRWHTKKLPRKTHKG 247
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 298 bits (731), Expect = 7e-81
Identities = 137/163 (84%), Positives = 147/163 (90%)
Frame = -3
Query: 580 RSYPVRHXKGLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 401
+ P + KGLRKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 284
Query: 400 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 221
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR
Sbjct: 285 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 344
Query: 220 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 92
+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 345 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387
Score = 106 bits (254), Expect = 4e-23
Identities = 50/78 (64%), Positives = 58/78 (74%)
Frame = -2
Query: 785 VKQXQKKAYIMESXLTGVPSRTK*NGPREHXEKPIPVDSVFAQDEMXDCIGVTQGAKGYK 606
+KQ QKKA++ME L G K REH EKPI V +VF QDEM DC+GVT+G KG+K
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG-KGFK 216
Query: 605 GVTSRWHTKKLPRKTXQG 552
GVTSRWHTKKLPRKT +G
Sbjct: 217 GVTSRWHTKKLPRKTHKG 234
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 298 bits (731), Expect = 7e-81
Identities = 137/163 (84%), Positives = 147/163 (90%)
Frame = -3
Query: 580 RSYPVRHXKGLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 401
+ P + KGLRKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 284
Query: 400 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 221
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR
Sbjct: 285 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 344
Query: 220 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 92
+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 345 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387
Score = 106 bits (254), Expect = 4e-23
Identities = 50/78 (64%), Positives = 58/78 (74%)
Frame = -2
Query: 785 VKQXQKKAYIMESXLTGVPSRTK*NGPREHXEKPIPVDSVFAQDEMXDCIGVTQGAKGYK 606
+KQ QKKA++ME L G K REH EKPI V +VF QDEM DC+GVT+G KG+K
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG-KGFK 216
Query: 605 GVTSRWHTKKLPRKTXQG 552
GVTSRWHTKKLPRKT +G
Sbjct: 217 GVTSRWHTKKLPRKTHKG 234
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 298 bits (731), Expect = 7e-81
Identities = 137/163 (84%), Positives = 147/163 (90%)
Frame = -3
Query: 580 RSYPVRHXKGLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 401
+ P + KGLRKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 297
Query: 400 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 221
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR
Sbjct: 298 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 357
Query: 220 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 92
+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 358 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
Score = 106 bits (254), Expect = 4e-23
Identities = 50/78 (64%), Positives = 58/78 (74%)
Frame = -2
Query: 785 VKQXQKKAYIMESXLTGVPSRTK*NGPREHXEKPIPVDSVFAQDEMXDCIGVTQGAKGYK 606
+KQ QKKA++ME L G K REH EKPI V +VF QDEM DC+GVT+G KG+K
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG-KGFK 229
Query: 605 GVTSRWHTKKLPRKTXQG 552
GVTSRWHTKKLPRKT +G
Sbjct: 230 GVTSRWHTKKLPRKTHKG 247
>AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-PB
protein.
Length = 1630
Score = 29.9 bits (64), Expect = 4.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 757 LWNPX*PGYHRGQSEMGPENXWRNLSLSILC 665
LWNP PG+H G ++ ++ WR ++ + C
Sbjct: 31 LWNPKSPGFHSGSAK---DDAWRQITRRMNC 58
>AY395750-1|AAR89513.1| 1199|Drosophila melanogaster ATM protein
protein.
Length = 1199
Score = 29.1 bits (62), Expect = 7.7
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Frame = -3
Query: 625 KGPKDTKVSLLVGT-QRSYPVRHXKGLRKVACIGAWHPXRVSFT--VARAGQKGY----- 470
K PK+T+ ++ + PV H L K G W R+++T VA GY
Sbjct: 976 KSPKETRYAIYKKICENIKPVFHYFLLEKFPIPGVWFERRLAYTNSVATTSMVGYVLGLG 1035
Query: 469 --HHRT----EMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMG 338
H + + ++ I GI + GK+ + + L+ + PMG
Sbjct: 1036 DRHTQNILVDQQTAEVIHIDFGIAFEQGKIQTTPETVPFRLTRDFVAPMG 1085
>AY113192-1|AAM29197.1| 574|Drosophila melanogaster AT01448p
protein.
Length = 574
Score = 29.1 bits (62), Expect = 7.7
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Frame = -3
Query: 625 KGPKDTKVSLLVGT-QRSYPVRHXKGLRKVACIGAWHPXRVSFT--VARAGQKGY----- 470
K PK+T+ ++ + PV H L K G W R+++T VA GY
Sbjct: 351 KSPKETRYAIYKKICENIKPVFHYFLLEKFPIPGVWFERRLAYTNSVATTSMVGYVLGLG 410
Query: 469 --HHRT----EMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMG 338
H + + ++ I GI + GK+ + + L+ + PMG
Sbjct: 411 DRHTQNILVDQQTAEVIHIDFGIAFEQGKIQTTPETVPFRLTRDFVAPMG 460
>AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB
protein.
Length = 2767
Score = 29.1 bits (62), Expect = 7.7
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Frame = -3
Query: 625 KGPKDTKVSLLVGT-QRSYPVRHXKGLRKVACIGAWHPXRVSFT--VARAGQKGY----- 470
K PK+T+ ++ + PV H L K G W R+++T VA GY
Sbjct: 2544 KSPKETRYAIYKKICENIKPVFHYFLLEKFPIPGVWFERRLAYTNSVATTSMVGYVLGLG 2603
Query: 469 --HHRT----EMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMG 338
H + + ++ I GI + GK+ + + L+ + PMG
Sbjct: 2604 DRHTQNILVDQQTAEVIHIDFGIAFEQGKIQTTPETVPFRLTRDFVAPMG 2653
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,738,620
Number of Sequences: 53049
Number of extensions: 795656
Number of successful extensions: 1994
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1984
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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