Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_M01
(799 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 33 0.20
12_02_1174 - 26696869-26698191 32 0.46
11_06_0610 - 25449085-25453284 30 2.5
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 30 2.5
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 30 2.5
03_02_0765 + 11000724-11002496 29 3.2
03_01_0515 - 3864796-3865425 29 3.2
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.2
04_03_0904 + 20717005-20718087 29 5.7
12_02_0299 - 17051570-17052474,17053542-17053755 28 7.5
07_03_1751 - 29215074-29216270 28 7.5
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/77 (32%), Positives = 26/77 (33%), Gaps = 1/77 (1%)
Frame = +3
Query: 540 GPPPYXXXXEPXXXXPXVVXFTXLXPXAXXXPXHXXXPXXPPXXXPXPXXLXSXPPVEXX 719
GPPP P P P A P P PP P P L S PP +
Sbjct: 1145 GPPPL-----PSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPP--LPSGPPPQPA 1197
Query: 720 XSP-PXVPXPXASXPVP 767
P P P P PVP
Sbjct: 1198 PPPLPIQPPPIPPPPVP 1214
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/76 (28%), Positives = 25/76 (32%)
Frame = +3
Query: 540 GPPPYXXXXEPXXXXPXVVXFTXLXPXAXXXPXHXXXPXXPPXXXPXPXXLXSXPPVEXX 719
GPPP P P + P + P P PP P P PP+
Sbjct: 1128 GPPPLPLDAPPP---PPLPEGPPPLP-SDSPPCQPPLPPSPPPATPPPP-----PPLSPS 1178
Query: 720 XSPPXVPXPXASXPVP 767
PP P P S P P
Sbjct: 1179 LPPPPPPPPLPSGPPP 1194
>12_02_1174 - 26696869-26698191
Length = 440
Score = 32.3 bits (70), Expect = 0.46
Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 1/93 (1%)
Frame = +3
Query: 465 PXFCPXYXXXRPXPRLXLVXXXXRXGPPPYXXXXEPXXXXPXVVXFTXLXPXAXXXPXHX 644
P P +P P L PPP +P P L P + P
Sbjct: 137 PPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPT 196
Query: 645 XXPXX-PPXXXPXPXXLXSXPPVEXXXSPPXVP 740
P PP P P + PP PP VP
Sbjct: 197 RPPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVP 229
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = +3
Query: 543 PPPYXXXXEPXXXXPXVVXFTXLXPXAXXXPXHXXXPXXPPXXXPXPXXLXSXPPVEXXX 722
PPP P P V P + P P P P P PP
Sbjct: 1121 PPPATVSLPP----PTVKPLPPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVIS 1176
Query: 723 SPPXVPXPXASXPV 764
PP V P PV
Sbjct: 1177 PPPPVKSPPPPAPV 1190
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/89 (24%), Positives = 24/89 (26%)
Frame = +3
Query: 498 PXPRLXLVXXXXRXGPPPYXXXXEPXXXXPXVVXFTXLXPXAXXXPXHXXXPXXPPXXXP 677
P P ++ PPP P P V P P P P P
Sbjct: 1153 PPPAPVILPPPPIKSPPPPAPVISPP---PPVKSPPPPAPVILPPPPVKSPPPPAPVISP 1209
Query: 678 XPXXLXSXPPVEXXXSPPXVPXPXASXPV 764
P PP PP V P PV
Sbjct: 1210 PPPVKSPPPPAPVILPPPPVKSPPPPAPV 1238
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Frame = +3
Query: 609 LXPXAXXXPXHXXXPXXPPXXXPXPXXLXSXPP----VEXXXSPPXVPXPXASXP 761
L P P P PP P P L PP + SPP P P P
Sbjct: 12 LSPGEAEWPPELRLPPPPPPHPPPPPPLEPAPPSTPQLRGEASPPPPPPPPVGPP 66
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/82 (29%), Positives = 28/82 (34%), Gaps = 7/82 (8%)
Frame = +3
Query: 543 PPPYXXXXEPXXXXPXVVX---FTXLXPXAXXX---PXHXXXPXXPPXXXPXPXXLXSXP 704
PPP P P ++ FT P P P PP P P + P
Sbjct: 377 PPPPPPPMSPSCLLPPIIPAPTFTYSSPPPPPLYYPPPPDISPSPPPSVTPLPPVVYPSP 436
Query: 705 PVEXXXSPPXV-PXPXASXPVP 767
P E SPP + P P VP
Sbjct: 437 P-EVTPSPPEIAPYPSPPEIVP 457
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/79 (25%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Frame = +3
Query: 540 GPP---PYXXXXEPXXXXPXVVXFTXLXPXAXXXPXHXXXPXXPPXXXPXPXXLXSXPPV 710
GPP PY E P + + P P PP P P + PP+
Sbjct: 490 GPPEINPYPSPPEIVPSPPEITPYPS-PPEIVPSPPEITPYPSPPEIVPSPPEIAPSPPI 548
Query: 711 EXXXSPPXVPXPXASXPVP 767
P P P P P
Sbjct: 549 VTPMPPIIYPSPPEVTPSP 567
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Frame = +3
Query: 543 PPPYXXXXEPXXXXPXVVXFTXLXPXAXXXPXHXXXPXXPPXXXPXPXXLXSXP-PVEXX 719
PPP P P P P PP P P + P P E
Sbjct: 413 PPPDISPSPPPSVTPLPPVVYPSPPEVTPSPPEIAPYPSPPEIVPSPPEITPYPSPPEIV 472
Query: 720 XSPPXV-PXPXASXPVP 767
SPP + P P VP
Sbjct: 473 PSPPEITPYPSPPEVVP 489
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/75 (24%), Positives = 18/75 (24%)
Frame = +3
Query: 543 PPPYXXXXEPXXXXPXVVXFTXLXPXAXXXPXHXXXPXXPPXXXPXPXXLXSXPPVEXXX 722
PP P P T P PP P P PPV
Sbjct: 615 PPKITPYPSPPEVTPSPPEITPYPSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPY 674
Query: 723 SPPXVPXPXASXPVP 767
P P P P P
Sbjct: 675 PPGIFPSPPEYSPEP 689
>03_02_0765 + 11000724-11002496
Length = 590
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = -1
Query: 766 GTGXEAXGXGTXGGXXXXSTGGXE--XKXXGXGXXXGGXXGXXXXFGXXXAXGNXXVKXT 593
G G A G GG TGG G G GG G G G K
Sbjct: 467 GAGGGAEAGGGFGGGAGAGTGGGGGLGGGAGGGGGLGGGAGGGLGGGAGAGGGFGGGKGG 526
Query: 592 TXGXXXXGSXXXXYGGG 542
G GS +GGG
Sbjct: 527 GFGGGLGGSSGSGFGGG 543
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +3
Query: 609 LXPXAXXXPXHXXXPXXPPXXXPXPXXLXSXPPVEXXXSPPXVPXPXASXPVP 767
L P P P PP P P S PP SPP P P S P P
Sbjct: 69 LMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPP--PPPSPPP-PSPVKSSPPP 118
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = +3
Query: 543 PPPYXXXXEPXXXXPXVVXFTXLXPXAXXXPXHXXXPXXPPXXXPXPXXLXSXPPVEXXX 722
PP P P V P P P PP P P + S PP
Sbjct: 63 PPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPPAW 122
Query: 723 SP 728
SP
Sbjct: 123 SP 124
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 633 PXHXXXPXXPPXXXPXPXXLXSXPPVEXXXSPPXVPXPXASXPVP 767
P P PP P P + S PP PP P P AS P P
Sbjct: 62 PPPAAGPLMPP--PPPPPSVTSSPPPPPLPPPP--PPPAASPPPP 102
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 651 PXXPPXXXPXPXXLXSXPPVEXXXSPPXVPXPXASXPVP 767
P PP P P PP PP P P P P
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPP 366
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/99 (23%), Positives = 29/99 (29%), Gaps = 2/99 (2%)
Frame = +3
Query: 477 PXYXXXRPXPRLXLVXXXXRXGPPPYXXXXEPXXXXPXVVXFTXL-XPXAXXXPXHXXXP 653
P Y +P P + PPPY P P +T P P + P
Sbjct: 71 PAYTPPKPTPTPPTYTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKPTPPTYKPQP 130
Query: 654 -XXPPXXXPXPXXLXSXPPVEXXXSPPXVPXPXASXPVP 767
P P P P + P P P + P P
Sbjct: 131 KPTPAPYTPTPTPPTYKPQPKPTPPPTYKPQPKPT-PTP 168
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/75 (29%), Positives = 25/75 (33%)
Frame = +3
Query: 543 PPPYXXXXEPXXXXPXVVXFTXLXPXAXXXPXHXXXPXXPPXXXPXPXXLXSXPPVEXXX 722
PPP P P + + P A P P PP P P PP+
Sbjct: 234 PPPPPFLPFPLPPIPFLTPPSP-PPPAFPFPL-PPWPWAPPPAFPFPHL----PPIFSPP 287
Query: 723 SPPXVPXPXASXPVP 767
SPP P P P P
Sbjct: 288 SPPPPPPPAFPFPFP 302
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/83 (25%), Positives = 24/83 (28%)
Frame = +3
Query: 498 PXPRLXLVXXXXRXGPPPYXXXXEPXXXXPXVVXFTXLXPXAXXXPXHXXXPXXPPXXXP 677
P P L + PPP P P + F L P P PP P
Sbjct: 276 PFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFP 335
Query: 678 XPXXLXSXPPVEXXXSPPXVPXP 746
P PP+ P P P
Sbjct: 336 WP-----FPPLAPLFPPYPSPPP 353
>07_03_1751 - 29215074-29216270
Length = 398
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = -1
Query: 766 GTGXEAXGXGTXGGXXXXSTGGXEXKXXGXGXXXGGXXGXXXXFGXXXAXGNXXVKXTTX 587
G G A G G GG GG G G GG G G G
Sbjct: 204 GAGGGAGGGGGLGGGAGGGAGGGGGLGGGAGGGHGGGGGLGGGAGGGAGVGGGAGGGAGA 263
Query: 586 GXXXXGSXXXXYGGG 542
G GGG
Sbjct: 264 GGGLGAGGGAGGGGG 278
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = -1
Query: 766 GTGXEAXGXGTXGGXXXXSTGGXEXKXXGXGXXXGGXXGXXXXFGXXXAXGNXXVKXTTX 587
G G A G G GG GG G G GG G G G
Sbjct: 158 GAGGGAGGGGGLGGGAGGGAGGGLGGGSGGGGGLGGGAGGGAGVGGGAGGGAGGGGGLGG 217
Query: 586 GXXXXGSXXXXYGGG 542
G GGG
Sbjct: 218 GAGGGAGGGGGLGGG 232
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,710,896
Number of Sequences: 37544
Number of extensions: 196917
Number of successful extensions: 1028
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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