Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_L03
         (899 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein ( Dros...    31   1.6  
AE014296-2765|AAF49441.1|  197|Drosophila melanogaster CG16724-P...    29   6.6  

>X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein (
            Drosophila melanogasterrudimentary gene. ).
          Length = 2236

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 641  WRSKQRGWRLQAI*RVH*TSSAYIDLPPYTPYRPFASMGRSC 766
            W S + GWRL  +  +  T+ + +D   +T ++  A  G  C
Sbjct: 1505 WNSSRSGWRLTLVCAMPNTNPSIVDRETFTQFQELAKAGARC 1546


>AE014296-2765|AAF49441.1|  197|Drosophila melanogaster CG16724-PA,
           isoform A protein.
          Length = 197

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 140 HSRSEMSASRRRLSAPNAYDSPP 208
           HSRS  S  RRR  +P+ Y+ PP
Sbjct: 111 HSRSRSSERRRRQRSPHRYNPPP 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,509,579
Number of Sequences: 53049
Number of extensions: 939148
Number of successful extensions: 2396
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2396
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)