Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_J24
         (874 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75048-1|CAA99340.1|  445|Homo sapiens homogentisate 1,2-dioxyge...    33   1.8  
U63008-1|AAB16836.1|  445|Homo sapiens homogentisate dioxygenase...    33   1.8  
BC071757-1|AAH71757.1|  445|Homo sapiens homogentisate 1,2-dioxy...    33   1.8  
AF045167-1|AAC02698.1|  445|Homo sapiens homogentisate 1,2-dioxy...    33   1.8  
AF000573-1|AAC51650.1|  445|Homo sapiens homogentisate 1,2-dioxy...    33   1.8  

>Z75048-1|CAA99340.1|  445|Homo sapiens homogentisate
           1,2-dioxygenase protein.
          Length = 445

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 24/72 (33%), Positives = 28/72 (38%)
 Frame = -2

Query: 573 VRPSEASXRGIXPPVXTGAXLKGVXPPYFQXNDESQASGXISGHXHAYSAPLLQLTPSLK 394
           VRP  A    +  P   G   K   PPY+  N  S+  G I GH  A     L    SL 
Sbjct: 306 VRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLH 365

Query: 393 XSSWPQTKPDID 358
            +  P   PD D
Sbjct: 366 STMTPH-GPDAD 376


>U63008-1|AAB16836.1|  445|Homo sapiens homogentisate dioxygenase
           protein.
          Length = 445

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 24/72 (33%), Positives = 28/72 (38%)
 Frame = -2

Query: 573 VRPSEASXRGIXPPVXTGAXLKGVXPPYFQXNDESQASGXISGHXHAYSAPLLQLTPSLK 394
           VRP  A    +  P   G   K   PPY+  N  S+  G I GH  A     L    SL 
Sbjct: 306 VRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLH 365

Query: 393 XSSWPQTKPDID 358
            +  P   PD D
Sbjct: 366 STMTPH-GPDAD 376


>BC071757-1|AAH71757.1|  445|Homo sapiens homogentisate
           1,2-dioxygenase (homogentisate oxidase) protein.
          Length = 445

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 24/72 (33%), Positives = 28/72 (38%)
 Frame = -2

Query: 573 VRPSEASXRGIXPPVXTGAXLKGVXPPYFQXNDESQASGXISGHXHAYSAPLLQLTPSLK 394
           VRP  A    +  P   G   K   PPY+  N  S+  G I GH  A     L    SL 
Sbjct: 306 VRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLH 365

Query: 393 XSSWPQTKPDID 358
            +  P   PD D
Sbjct: 366 STMTPH-GPDAD 376


>AF045167-1|AAC02698.1|  445|Homo sapiens homogentisate
           1,2-dioxygenase protein.
          Length = 445

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 24/72 (33%), Positives = 28/72 (38%)
 Frame = -2

Query: 573 VRPSEASXRGIXPPVXTGAXLKGVXPPYFQXNDESQASGXISGHXHAYSAPLLQLTPSLK 394
           VRP  A    +  P   G   K   PPY+  N  S+  G I GH  A     L    SL 
Sbjct: 306 VRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLH 365

Query: 393 XSSWPQTKPDID 358
            +  P   PD D
Sbjct: 366 STMTPH-GPDAD 376


>AF000573-1|AAC51650.1|  445|Homo sapiens homogentisate
           1,2-dioxygenase protein.
          Length = 445

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 24/72 (33%), Positives = 28/72 (38%)
 Frame = -2

Query: 573 VRPSEASXRGIXPPVXTGAXLKGVXPPYFQXNDESQASGXISGHXHAYSAPLLQLTPSLK 394
           VRP  A    +  P   G   K   PPY+  N  S+  G I GH  A     L    SL 
Sbjct: 306 VRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLH 365

Query: 393 XSSWPQTKPDID 358
            +  P   PD D
Sbjct: 366 STMTPH-GPDAD 376


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,759,652
Number of Sequences: 237096
Number of extensions: 1997446
Number of successful extensions: 3905
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3842
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)