Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_J04
(822 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr 1|... 126 5e-30
SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr 1|... 83 5e-17
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 79 6e-16
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 34 0.028
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.20
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 31 0.26
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.35
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 30 0.46
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 29 0.60
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 1.1
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 29 1.1
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 29 1.1
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 28 1.8
SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|c... 28 1.8
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.4
SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 27 3.2
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 27 3.2
SPAC23G3.05c |||regulator of G-protein signaling |Schizosaccharo... 27 4.3
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 27 4.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 4.3
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 27 4.3
SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyce... 27 4.3
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 4.3
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.3
SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|ch... 26 5.6
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 26 5.6
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 26 7.4
SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces pomb... 26 7.4
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.4
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 26 7.4
SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 7.4
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 25 9.8
SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit L37|... 25 9.8
SPAC23G3.01 |rpb2|SPAC521.06|DNA-directed RNA polymerase II comp... 25 9.8
SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|... 25 9.8
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 9.8
SPAPB1A10.04c |cwp1||geranylgeranyltransferase I alpha subunit C... 25 9.8
>SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 767
Score = 126 bits (303), Expect = 5e-30
Identities = 69/152 (45%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Frame = -1
Query: 717 KLKQACGFEYTSKLQRMFQDXGVSKDLNENFRKHMANSSEQPLHIDFSIQVLSSGSWPFQ 538
KLK+ CGFEYTSKLQRMFQD +S+++ E F + + + +IDFS VL + WP
Sbjct: 486 KLKEVCGFEYTSKLQRMFQDISLSQEITEAFWQLPQSRAG---NIDFSALVLGTSFWPLS 542
Query: 537 -QSTSFQLPTELERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLT--NCFKN-RYTLQAS 370
+ +F LP EL F +Y S H+GRKL+WL+++SKGE+ N N Y Q S
Sbjct: 543 PNNVNFHLPEELVPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVS 602
Query: 369 TFQMAVLLQYNDNTSWTVRQLEQHTGIKGDFL 274
T+QM VLL YN S+T +L + TG+ DFL
Sbjct: 603 TYQMGVLLLYNHRDSYTYEELAKITGLSTDFL 634
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -2
Query: 803 FPEFYSKMLAKRLVQHMSASDDAEASMIS 717
F FY+K+LAKRLV S S DAE+SM+S
Sbjct: 457 FQNFYTKLLAKRLVNGTSNSQDAESSMLS 485
>SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 785
Score = 83.0 bits (196), Expect = 5e-17
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Frame = -1
Query: 717 KLKQACGFEYTSKLQRMFQDXGVSKDLNENFRKHMANSSEQPLHIDFSIQVLSSGSWPFQ 538
+LKQ G +T KL+ MF D +S++L + ++ + A S +P +D ++ +L+S WP
Sbjct: 494 RLKQEAGNVFTQKLEGMFNDMNLSQELLQEYKHNSALQSAKPA-LDLNVSILASTFWPID 552
Query: 537 QST---SFQLPTELERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQAST 367
S P L + +FT FY S+H+GRKL W +M ++ N +Y L ST
Sbjct: 553 LSPHKIKCNFPKVLLAQIDQFTDFYLSKHTGRKLLWYPSMGSADVRVNFKDRKYDLNVST 612
Query: 366 FQMAVLLQYND 334
+LL + D
Sbjct: 613 IASVILLLFQD 623
Score = 32.3 bits (70), Expect = 0.086
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 803 FPEFYSKMLAKRLVQHMSASDDAEASMIS 717
F ++Y LAKRL+ + S S DAE MIS
Sbjct: 465 FEKYYKTHLAKRLLNNRSISSDAELGMIS 493
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 79.4 bits (187), Expect = 6e-16
Identities = 40/127 (31%), Positives = 66/127 (51%)
Frame = -1
Query: 714 LKQACGFEYTSKLQRMFQDXGVSKDLNENFRKHMANSSEQPLHIDFSIQVLSSGSWPFQQ 535
LK+ CG ++T L+ MF+D +SK+ +FR A + LH D + VLS WP
Sbjct: 453 LKKTCGSQFTHSLEGMFRDVNISKEFTSSFRHSKAAHN---LHRDLYVNVLSQAYWPSYP 509
Query: 534 STSFQLPTELERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMA 355
+ +LP ++++ + F FY S+ G+K++W ++ + L S FQ
Sbjct: 510 ESHIRLPDDMQQDLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNKELSISLFQAC 569
Query: 354 VLLQYND 334
VLLQ+N+
Sbjct: 570 VLLQFNN 576
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 33.9 bits (74), Expect = 0.028
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = -2
Query: 311 SWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPG- 135
S SS+P+S +S+ ++S ++IP+ S +S S +S S + +
Sbjct: 217 SSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSS 276
Query: 134 ------PTARNFTASSRRYSSSQPTTGLSTL 60
PT+ + T SS SSS PT+ ST+
Sbjct: 277 SSSSSSPTSTSSTISSSSSSSSSPTSTSSTI 307
Score = 31.1 bits (67), Expect = 0.20
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = -2
Query: 314 ASWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQP 174
+S SST +S TSS S+S PA++ + S +SH+ S SK +S P
Sbjct: 373 SSSSSTSSSTLTSSSSSSSRPASS-SSHSSSLSSHKSSSSSKSSSAP 418
Score = 29.1 bits (62), Expect = 0.80
Identities = 29/95 (30%), Positives = 46/95 (48%)
Frame = -2
Query: 311 SWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPGP 132
S SS+ S SS S+S T +++ + S I +S S S P S S ++ P
Sbjct: 244 SSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSS--SSSSPTSTSSTISSSSSSS-SSP 300
Query: 131 TARNFTASSRRYSSSQPTTGLSTLGVTHLRRGSSA 27
T+ + T SS SSS ++ LS+ ++ SS+
Sbjct: 301 TSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSS 335
Score = 29.1 bits (62), Expect = 0.80
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = -2
Query: 314 ASWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSH-SKPASQPQQDHRSRLTALP 138
+S+SS+P S ++ S+S +P+++ +FS +S + S S S S LT+
Sbjct: 330 SSFSSSPTSSSSTISSSSSSPSSS--SFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTS-- 385
Query: 137 GPTARNFTASSRRYSSSQPTTGLSTLGVTHLRRGSSA 27
+ ++SSR SSS ++ LS+ + + SSA
Sbjct: 386 -----SSSSSSRPASSSSHSSSLSSHKSSSSSKSSSA 417
Score = 28.3 bits (60), Expect = 1.4
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = -2
Query: 305 SSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPGPTA 126
SS + K +SS +S P ++ AF TS R SHS S + LTA ++
Sbjct: 401 SSLSSHKSSSSSKSSSAPVSS--AFYHNSTSSRSSSHSSSHSLSSLSSKPILTA---SSS 455
Query: 125 RNFTASSRRYSSS 87
T+SS Y S
Sbjct: 456 SLLTSSSHTYERS 468
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.1 bits (67), Expect = 0.20
Identities = 26/95 (27%), Positives = 40/95 (42%)
Frame = -2
Query: 311 SWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPGP 132
S S T S G SS S T ++ S +S S S +S S T+ P
Sbjct: 554 SSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSS 613
Query: 131 TARNFTASSRRYSSSQPTTGLSTLGVTHLRRGSSA 27
+ + ++SS SS P+T + + + GSS+
Sbjct: 614 ISSSISSSSTILSSPTPSTSSLMISSSSIISGSSS 648
Score = 25.4 bits (53), Expect = 9.8
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = -2
Query: 314 ASWSS-TPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALP 138
+SW++ T +S TSS +AS TP ++ A S +S S + A+ + +
Sbjct: 926 SSWTAETSSSAITSSVAASVTPTSSSSASSWSSSSEVDPSTAASATGSSTSSIATASVSG 985
Query: 137 GPTARNFTASSRRYSSSQ----PTTGLSTLGV 54
T+ TAS+ S+S TG ST V
Sbjct: 986 SSTSSVATASATDSSTSSIAAASVTGSSTSSV 1017
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 30.7 bits (66), Expect = 0.26
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +2
Query: 539 WKGHE-PDDSTWMLKSMCRGCSEL 607
W+G++ P D+TW ++ C GC +L
Sbjct: 104 WEGYDDPSDNTWSSEADCSGCKQL 127
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 30.3 bits (65), Expect = 0.35
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = -2
Query: 314 ASWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPG 135
+S SS+ +S +SS S+S + +++ + S +S S S +S P S +
Sbjct: 163 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSS 222
Query: 134 PTARNFTASSRRYSSSQPTTGLST 63
++ + ++SSR SSS T +S+
Sbjct: 223 SSSSSSSSSSRPSSSSSFITTMSS 246
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 29.9 bits (64), Expect = 0.46
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = -2
Query: 314 ASWSSTPAS-KGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALP 138
+S S+TPA+ G S+ + +T A S T++ +S KPA+ + +T
Sbjct: 189 SSTSTTPATGSGGFSFGKPASLGSTNNA-STSTTANSGFSFGKPATTSAPGSNTTVTPSS 247
Query: 137 GPTARNFTASSRRYSSSQPTTGLS 66
T N + + + S PTTG S
Sbjct: 248 SITGTNDSKPAASNTGSAPTTGFS 271
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 29.5 bits (63), Expect = 0.60
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 539 WKGHE-PDDSTWMLKSMCRGCSEL 607
W+G++ P D+TW + C GC EL
Sbjct: 199 WEGYDDPSDNTWNDEEDCAGCLEL 222
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 28.7 bits (61), Expect = 1.1
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = -2
Query: 314 ASWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPG 135
AS +S+ ++ TSS SAS T +++ A S +S S S S H S ++P
Sbjct: 96 ASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSS---SVP- 151
Query: 134 PTARNFTASSRRYSSSQPTTGLST 63
++SS +SSS T+GLS+
Sbjct: 152 ------SSSSSYHSSSMTTSGLSS 169
Score = 27.1 bits (57), Expect = 3.2
Identities = 23/93 (24%), Positives = 37/93 (39%)
Frame = -2
Query: 305 SSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPGPTA 126
SS PAS +++ S S + ++ IP+ S S + +S S T+ +
Sbjct: 20 SSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSF 79
Query: 125 RNFTASSRRYSSSQPTTGLSTLGVTHLRRGSSA 27
SS SS + L++ L SSA
Sbjct: 80 ITSLVSSSSQQSSSSSASLTSSSSATLTSSSSA 112
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 264 IKNSGYHNPRILADKNKSSTVVTQQASIAAST 169
+K S Y P + +KN SS+V QAS+A +T
Sbjct: 26 LKKSTYQRPSFI-EKNHSSSVTASQASLAFNT 56
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = -2
Query: 314 ASWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPG 135
AS S +P + + ++ ++ TPA + T S+ + S ++L
Sbjct: 218 ASGSFSPFATSSPNFLSTSTPAPPNSNNANPSTLFSSIPSSRHTTSNHFPSNSAQSSLFS 277
Query: 134 PTARNFTASSRRYSSSQPTTGLS 66
PTAR TA ++SSQ + +S
Sbjct: 278 PTARPLTARKLGFASSQTKSAVS 300
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 212 HRQWSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSS 90
H+Q H P QP++ RS TALP P+ N + S+ +S
Sbjct: 123 HQQKIHRNP--QPRRRRRST-TALPNPSLSNVSVSTTNLAS 160
>SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 411
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = -3
Query: 274 HTAHQELRLPQSPHSRR*KQVIDSGHTASQHRSLNRTIAADSPRFLVLRHATSL 113
H + + S S + K I+ A H++ NRT DSP +V T L
Sbjct: 296 HQPYHYTNVKDSQGSHQTKVTIEENMEAPSHQAANRTTLTDSPLGIVEDETTIL 349
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 314 ASWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQP 174
+S SS+ +S +SS +S + + + S TSHR SH + +P
Sbjct: 145 SSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTSHRTTSHKSSSYRP 191
>SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1028
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = -1
Query: 282 DFLIQRIKNSGYHNPRILADKNKSSTVVTQQASIAAS 172
+F ++R+K+ + P IL S+ ++T+QA +A+S
Sbjct: 458 NFNVRRVKSDTVYIPTILQLLRSSTQLMTEQAFVASS 494
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -2
Query: 302 STPASKGTSSYSASRTPATTIPA-FSQIKTSHRQWSHSKP 186
STP+++ S + SRTP+ ++PA +Q K + SKP
Sbjct: 13 STPSNQNNYSNNNSRTPSYSLPAPVAQKKNAQIPLKASKP 52
>SPAC23G3.05c |||regulator of G-protein signaling
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 343
Score = 26.6 bits (56), Expect = 4.3
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 531 TSFQLPTELERSV--HRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQAS 370
TS L TE ++ H FT F S+ S L+ +Y + G LL N T+ +S
Sbjct: 64 TSTSLNTESSSTLGPHHFTRFRSASLSLEDLSTVYWPNFGPLLLEELSNEQTINSS 119
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 287 LMPVCCSSWRTVHEVLSLYCSSTAIWNVLACSVYLFLKQLVRSSPLLML*SQFSLR 454
L+PVCC + + +++ S + WN + + +K V +P++ F+LR
Sbjct: 1115 LLPVCCFLRFMYYFLPTVFSLSGSYWNSIFDYIKYAMKMSVVDAPIVKSFELFALR 1170
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 4.3
Identities = 16/85 (18%), Positives = 38/85 (44%)
Frame = -2
Query: 305 SSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPGPTA 126
SSTP+S SS +++ + + + + ++ + S P S + + T+
Sbjct: 284 SSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPL 343
Query: 125 RNFTASSRRYSSSQPTTGLSTLGVT 51
+ +++ +SS P T +++ T
Sbjct: 344 SSVNSTTATSASSTPLTSVNSTTAT 368
Score = 25.4 bits (53), Expect = 9.8
Identities = 22/88 (25%), Positives = 41/88 (46%)
Frame = -2
Query: 314 ASWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPG 135
AS +S+ A TSS S TP++T P S T+ S S P + + ++ P
Sbjct: 267 ASATSSSAQYNTSSLLPSSTPSST-PLSSANSTTATSAS-STPLTSVNSTTTTSASSTPL 324
Query: 134 PTARNFTASSRRYSSSQPTTGLSTLGVT 51
+ + +++ +SS P + +++ T
Sbjct: 325 SSVSSANSTTATSTSSTPLSSVNSTTAT 352
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 26.6 bits (56), Expect = 4.3
Identities = 23/92 (25%), Positives = 36/92 (39%)
Frame = -2
Query: 308 WSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPGPT 129
W +P S +S + + P S I Q S + Q +H S +LP +
Sbjct: 210 WQQSPLESPLSMHSLQESLHSVEPE-SPIFQQAPQIPLSNASQQSYINHSSDGASLPQSS 268
Query: 128 ARNFTASSRRYSSSQPTTGLSTLGVTHLRRGS 33
NF +S +R S S L + +L + S
Sbjct: 269 FLNFNSSGKRVSVSAAAQQHKNLFLPYLPQAS 300
>SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 415
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 242 IPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALP 138
+P S + TS HS PAS P +SR +LP
Sbjct: 315 LPTLSAV-TSDSAQPHSLPASMPSSQPQSRSESLP 348
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 4.3
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = -2
Query: 290 SKGTSSYSASRTPATTIPAFSQIKTSHRQWS-----HSKPASQPQQDHRSRLTALPGPT- 129
S +SS S +++PAT + S + +H +S H+ + + LP T
Sbjct: 3686 SPHSSSISDTKSPATVTISSSSGQFTHSTFSTGSTMHNTVSHATSTSSSFTTSHLPTNTL 3745
Query: 128 ARNFTASSRRYSSSQPTTGLSTLGVTHLRRGSSA 27
A F S +SSS GLST + + GSS+
Sbjct: 3746 ASTFDNSQSIFSSSSGVPGLSTKSSSLGKIGSSS 3779
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 4.3
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = -2
Query: 311 SWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPGP 132
S SSTP+S +SS S+ + ++ + S+ +S S S +S S ++
Sbjct: 149 SSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKS 208
Query: 131 TAR-NFTASSRRYSSS 87
+A + + SS ++SSS
Sbjct: 209 SASPSSSKSSSKFSSS 224
>SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 611
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 720 DHRRLCVIAGRHVLHQSLRQHLAVKFW 800
+ R+LC G +V+ S+R+H ++ W
Sbjct: 347 ESRKLCEAVGENVVVTSIREHSQLQTW 373
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -2
Query: 305 SSTPASKGTSSYSASRTPATTIPAFS 228
+ +P S +S+ SAS + +TT PAFS
Sbjct: 530 AGSPPSPSSSTKSASSSYSTTTPAFS 555
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -2
Query: 275 SYSASRTPATTIPAFSQIKTSHRQWSHS--KPASQPQQDHRSRLTALPGPTARNFTASSR 102
S +++ + + +++ +R+ +H+ + A Q + R RL+A T + S
Sbjct: 407 SMGSNQNSNSAMDQLAKVNERNRRRNHTEIRLAEQRMNEERRRLSAAATATPMSAPTSVL 466
Query: 101 RYSSSQPTTGLST 63
+S QP+ LST
Sbjct: 467 TGTSPQPSPSLST 479
>SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 424
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 551 EPDDSTWMLKSMCRGCSELF 610
+PDD +WML C GC + F
Sbjct: 125 KPDDGSWMLG--CDGCEDWF 142
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 7.4
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -2
Query: 311 SW-SSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPG 135
SW SST A+ TSS S+S + ++ + S+I +S+ + Q SRL +
Sbjct: 163 SWNSSTSAATNTSSSSSSSSQSSVVSVNSEI------FSYFGLSQQYVNYSTSRLCVVGT 216
Query: 134 PTARNFTASSRRYSSSQPTTGLSTLGVT 51
P A T S S+ ++T G T
Sbjct: 217 PRANMSTVSVTNNGSAVSNYTVNTNGWT 244
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = -2
Query: 281 TSSYSASRTPA--TTIPAFSQIKTSHRQ---WSHSKPASQPQQDHRSRLTALPGPTARNF 117
TS +S++ +P T P++S + + S P+ P S + PT+ ++
Sbjct: 1540 TSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSY 1599
Query: 116 TASSRRYSSSQPT 78
+ +S YS++ P+
Sbjct: 1600 SPTSPSYSATSPS 1612
>SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 217
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +1
Query: 613 HVLPEVLVQVLRHAXVLEHSLQFACVLESAGLFQFEIIDASASSLADMCCTSLFAS 780
H++P + +L H +L HSL L S F + S C SLF S
Sbjct: 150 HLIPFINFFLLYHQIILSHSLFHISHLISFHFLFFSFLSFPLLSFILFPCFSLFLS 205
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = -2
Query: 305 SSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQWSHSKPASQPQQDHRSRLTALPGPTA 126
+ TP++ T S T +TT+P ++ SH + P + L+ P +A
Sbjct: 42 AKTPSNHATEELQQSSTNSTTLPTQEAAVETNASASHETSFALPTTSPAASLSISPTKSA 101
>SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit
L37|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/45 (22%), Positives = 22/45 (48%)
Frame = -1
Query: 255 SGYHNPRILADKNKSSTVVTQQASIAASTGPSQPTHRASWSYGTQ 121
S Y N +L SS+ + +++ +++ P +P H + + Q
Sbjct: 22 SCYSNTLVLRSSRNSSSSLVKRSYVSSRVSPKKPQHNSDATSSAQ 66
>SPAC23G3.01 |rpb2|SPAC521.06|DNA-directed RNA polymerase II complex
subunit Rpb2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1210
Score = 25.4 bits (53), Expect = 9.8
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -1
Query: 339 NDNTSWTVRQLEQHTGIKGDFLIQRIKNSG--YHNPRILADKNKSSTVVTQQASIAASTG 166
+D+++ T+ Q QHTG +GD + N G Y + + + + S+T + Q + +
Sbjct: 51 DDDSTLTLDQYAQHTGAQGDVTRRYEINFGQIYLSRPTMTEADGSTTTMFPQEARLRNLT 110
Query: 165 PSQPTH 148
S P +
Sbjct: 111 YSSPLY 116
>SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|chr
3|||Manual
Length = 542
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 314 ASWSSTPASKGTSSYSASRTPATTIPAFSQIKTSHRQ 204
ASW+ T + G+S+ + A +P F + +S Q
Sbjct: 141 ASWALTNVASGSSNQTHVVVEANAVPVFVSLLSSSEQ 177
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 25.4 bits (53), Expect = 9.8
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -1
Query: 477 FYSSQHSGRKLNWLYNMSK 421
FY QH G+++ W Y ++
Sbjct: 284 FYRDQHLGKRIGWYYTAAQ 302
>SPAPB1A10.04c |cwp1||geranylgeranyltransferase I alpha subunit
Cwp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 294
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 647 DTPMSWNILCSLLVYSNP----QACFNLRSSTPLRHR 745
D +WN LC +L S P NLR + P H+
Sbjct: 216 DNQSAWNYLCGVLDKSGPSKLDNLIANLRKNLPALHK 252
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,070,232
Number of Sequences: 5004
Number of extensions: 64990
Number of successful extensions: 311
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 402440190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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