Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_H23
         (850 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026358-1|AAH26358.1|  535|Homo sapiens solute carrier family 2...    32   3.0  
AY145501-1|AAN52927.1|  547|Homo sapiens putative transmembrane ...    32   3.0  
AL365318-2|CAH70686.1|  547|Homo sapiens solute carrier family 2...    32   3.0  
AL357137-2|CAH70380.1|  547|Homo sapiens solute carrier family 2...    32   3.0  
AB209108-1|BAD92345.1|  310|Homo sapiens solute carrier family 2...    31   7.0  

>BC026358-1|AAH26358.1|  535|Homo sapiens solute carrier family 22
           (organic cation transporter), member 15 protein.
          Length = 535

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +1

Query: 205 PPPRDAGL-AVVGATTTSPLGRQTVRSPPR-----WRRLEWSILRNTPLGQNQRGSRIAG 366
           P  +D G+ AVV + + S LG+ T+ +           L  +++RN  LG     SR+ G
Sbjct: 375 PEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGG 434

Query: 367 LPSPGCSCVKRVQSSLHVVFLG 432
           + +P    +K VQ SL  +  G
Sbjct: 435 IIAPFIPSLKYVQWSLPFIVFG 456


>AY145501-1|AAN52927.1|  547|Homo sapiens putative transmembrane
           transporter FLIPT 1 protein.
          Length = 547

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +1

Query: 205 PPPRDAGL-AVVGATTTSPLGRQTVRSPPR-----WRRLEWSILRNTPLGQNQRGSRIAG 366
           P  +D G+ AVV + + S LG+ T+ +           L  +++RN  LG     SR+ G
Sbjct: 387 PEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGG 446

Query: 367 LPSPGCSCVKRVQSSLHVVFLG 432
           + +P    +K VQ SL  +  G
Sbjct: 447 IIAPFIPSLKYVQWSLPFIVFG 468


>AL365318-2|CAH70686.1|  547|Homo sapiens solute carrier family 22
           (organic cation transporter), member 15 protein.
          Length = 547

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +1

Query: 205 PPPRDAGL-AVVGATTTSPLGRQTVRSPPR-----WRRLEWSILRNTPLGQNQRGSRIAG 366
           P  +D G+ AVV + + S LG+ T+ +           L  +++RN  LG     SR+ G
Sbjct: 387 PEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGG 446

Query: 367 LPSPGCSCVKRVQSSLHVVFLG 432
           + +P    +K VQ SL  +  G
Sbjct: 447 IIAPFIPSLKYVQWSLPFIVFG 468


>AL357137-2|CAH70380.1|  547|Homo sapiens solute carrier family 22
           (organic cation transporter), member 15 protein.
          Length = 547

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +1

Query: 205 PPPRDAGL-AVVGATTTSPLGRQTVRSPPR-----WRRLEWSILRNTPLGQNQRGSRIAG 366
           P  +D G+ AVV + + S LG+ T+ +           L  +++RN  LG     SR+ G
Sbjct: 387 PEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGG 446

Query: 367 LPSPGCSCVKRVQSSLHVVFLG 432
           + +P    +K VQ SL  +  G
Sbjct: 447 IIAPFIPSLKYVQWSLPFIVFG 468


>AB209108-1|BAD92345.1|  310|Homo sapiens solute carrier family 2
           (facilitated glucose transporter), member 6 variant
           protein.
          Length = 310

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 328 PLGQNQRGSRIAGLPSPGCSCVK 396
           P   +++ +  AG+PSPGCSC++
Sbjct: 255 PASSSEQATPWAGVPSPGCSCLR 277


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,591,760
Number of Sequences: 237096
Number of extensions: 2886243
Number of successful extensions: 7190
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7187
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)