Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_H23
         (850 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    28   0.12 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.88 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              24   2.0  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          23   2.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.6  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    23   4.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   8.2  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 553 TRSAASFCEMVHSAEVEHR 609
           T +  SFCEM+H+A+V  R
Sbjct: 566 TAATLSFCEMIHNAQVNKR 584


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 391 VKRVQSSLHVVFLGPPRRSP 450
           V+  QS LH+    PP RSP
Sbjct: 664 VQHTQSQLHLHLTSPPARSP 683


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = -2

Query: 129 EVWTLVVERQEVLVSSTLTYPAQYPQKRAEVRR 31
           E + LV +++E+ ++  LT+  + P  RAEV++
Sbjct: 78  EQFGLVDDKRELSLNGMLTFFQRIPAYRAEVQK 110


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 182 AEHISPITLPLGTPDWRSSAPRPP 253
           AE + P  LP G  +  SS P+PP
Sbjct: 39  AEEVDP--LPFGVENTISSVPQPP 60


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 2   FFFFFWSGGNRRTSALFWGYWAG 70
           +++FF     +RTS   WG W G
Sbjct: 475 YYYFF----TQRTSTNLWGEWMG 493


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 529 VERGPGRRISP 497
           V+RGPG R+SP
Sbjct: 109 VQRGPGGRLSP 119


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/39 (25%), Positives = 14/39 (35%)
 Frame = +2

Query: 614  HDSSSPSIDATKXGXXNSVPIFAXKXXXPPXPMXGXGNN 730
            H  S  S+     G   ++P+       PP P     NN
Sbjct: 1833 HYGSRGSVGRRSVGSARNIPVSGSPEPPPPPPRNHDQNN 1871


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 164 ESEAFSAEHISPITLPLGTPDWR 232
           +S  F  + I+   LPLG   WR
Sbjct: 174 DSAIFDGDFITENNLPLGLEVWR 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,809
Number of Sequences: 438
Number of extensions: 4749
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)