Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_G02
(805 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 143 8e-34
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 143 8e-34
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 143 8e-34
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 143 8e-34
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 143 8e-34
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 143 8e-34
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 143 8e-34
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 143 8e-34
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 143 8e-34
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 143 8e-34
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 143 8e-34
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 143 8e-34
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 141 2e-33
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 139 1e-32
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 33 1.2
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 33 1.2
Y17739-1|CAB50769.1| 368|Homo sapiens hepatocyte nuclear factor... 31 3.7
U96173-1|AAD00826.1| 465|Homo sapiens hepatocyte nuclear factor... 31 3.7
U77975-1|AAB61705.1| 292|Homo sapiens hepatocyte nuclear factor... 31 3.7
AF035581-1|AAD02033.1| 465|Homo sapiens hepatocyte nuclear fact... 31 3.7
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 30 8.5
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 216 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 274
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 275 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 334
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 335 RRNTILRQARNHKLR 349
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRR-IQRRGPCIIYNEDNG 215
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 143 bits (346), Expect = 8e-34
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 141 bits (342), Expect = 2e-33
Identities = 69/135 (51%), Positives = 89/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K
Sbjct: 231 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 289
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 290 NYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 349
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 350 RRNTILCQARNHKLR 364
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 207 KGKMRNRRRIQRRGPCIIYNEDNG 230
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 139 bits (336), Expect = 1e-32
Identities = 67/135 (49%), Positives = 88/135 (65%)
Frame = -3
Query: 707 LTRAFRNIPRCGAPEC*PS*TXLKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 528
+ +AFRNIP LKLAPGGH+GRF IW +SAF +LD L+G+W+ + K
Sbjct: 217 IIKAFRNIPGITLLNV-SKLNILKLAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKS 275
Query: 527 NFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 348
N+NLP +M NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 276 NYNLPMHEMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTM 335
Query: 347 KRKAILELRRRKNLK 303
+R IL R L+
Sbjct: 336 RRNTILRQARNHKLR 350
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 780 KGKMRTLXCIQRKGPXIXFNKDSG 709
KGKMR IQR+GP I +N+D+G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNG 216
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 33.1 bits (72), Expect = 1.2
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Frame = -3
Query: 572 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 399
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 26 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 85
Query: 398 LTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLXKRNPAMKAEKLRER 222
+T ++ + LK+ IL ++ LK L E + K RN K KL E+
Sbjct: 86 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 138
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 33.1 bits (72), Expect = 1.2
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Frame = -3
Query: 572 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 399
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 771 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 830
Query: 398 LTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLXKRNPAMKAEKLRER 222
+T ++ + LK+ IL ++ LK L E + K RN K KL E+
Sbjct: 831 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 883
>Y17739-1|CAB50769.1| 368|Homo sapiens hepatocyte nuclear factor 6
protein.
Length = 368
Score = 31.5 bits (68), Expect = 3.7
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -1
Query: 742 GAXHNXQQGFRX*LAPSATFPGVELLNVNQAEPS*SWLREVILDVSSSGLSPHSAGLTPY 563
G+ HN QQG P A P ++L N E + ++ L+P SAG+ P
Sbjct: 188 GSIHNSQQGLPHYAHPGAAMPTDKMLTPNGFE---THHPAMLGRHGEQHLTPTSAGMVPI 244
Query: 562 SGHGRHH 542
+G HH
Sbjct: 245 NGLPPHH 251
>U96173-1|AAD00826.1| 465|Homo sapiens hepatocyte nuclear factor-6
alpha protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.7
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -1
Query: 742 GAXHNXQQGFRX*LAPSATFPGVELLNVNQAEPS*SWLREVILDVSSSGLSPHSAGLTPY 563
G+ HN QQG P A P ++L N E + ++ L+P SAG+ P
Sbjct: 188 GSIHNSQQGLPHYAHPGAAMPTDKMLTPNGFE---AHHPAMLGRHGEQHLTPTSAGMVPI 244
Query: 562 SGHGRHH 542
+G HH
Sbjct: 245 NGLPPHH 251
>U77975-1|AAB61705.1| 292|Homo sapiens hepatocyte nuclear factor 6
protein.
Length = 292
Score = 31.5 bits (68), Expect = 3.7
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -1
Query: 742 GAXHNXQQGFRX*LAPSATFPGVELLNVNQAEPS*SWLREVILDVSSSGLSPHSAGLTPY 563
G+ HN QQG P A P ++L N E + ++ L+P SAG+ P
Sbjct: 15 GSIHNSQQGLPHYAHPGAAMPTDKMLTPNGFE---THHPAMLGRHGEQHLTPTSAGMVPI 71
Query: 562 SGHGRHH 542
+G HH
Sbjct: 72 NGLPPHH 78
>AF035581-1|AAD02033.1| 465|Homo sapiens hepatocyte nuclear factor
6 protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.7
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -1
Query: 742 GAXHNXQQGFRX*LAPSATFPGVELLNVNQAEPS*SWLREVILDVSSSGLSPHSAGLTPY 563
G+ HN QQG P A P ++L N E + ++ L+P SAG+ P
Sbjct: 188 GSIHNSQQGLPHYAHPGAAMPTDKMLTPNGFE---AHHPAMLGRHGEQHLTPTSAGMVPI 244
Query: 562 SGHGRHH 542
+G HH
Sbjct: 245 NGLPPHH 251
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 595 LSPHSAGLTPYSGHGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSG 455
+ PH A L G G + K ++T P QR P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,726,964
Number of Sequences: 237096
Number of extensions: 1895800
Number of successful extensions: 4117
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4107
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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