Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_F23
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06475-1|AAB59219.1|  226|Drosophila melanogaster brain-specific...    29   7.9  
AY051977-1|AAK93401.1|  931|Drosophila melanogaster LD44526p pro...    29   7.9  
AY032851-1|AAK51129.1|  960|Drosophila melanogaster Cornetto pro...    29   7.9  
AE014296-1202|AAF50605.2|  960|Drosophila melanogaster CG32386-P...    29   7.9  

>L06475-1|AAB59219.1|  226|Drosophila melanogaster brain-specific
           homeobox protein protein.
          Length = 226

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 23/77 (29%), Positives = 31/77 (40%)
 Frame = +2

Query: 26  GLGPNLLRGPRAYGARGVCETQRSAGVESRSRAQGF*DPPTKRLPCHSYTRRGRGATAVN 205
           G+G N LR  R   AR V    + +G+E R   Q +  PP +       T  G   T V 
Sbjct: 121 GMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSPPER---VELATALGLSETQVK 177

Query: 206 TTTRRRGSPQGRPADGA 256
           T  + R     +   GA
Sbjct: 178 TWFQNRRMKHKKQLAGA 194


>AY051977-1|AAK93401.1|  931|Drosophila melanogaster LD44526p
           protein.
          Length = 931

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = +2

Query: 35  PNLLRGPRAYGARGVCETQRSAGVESRSRAQGF*DPPTKRLPCHSYTRRGRGATAVNTTT 214
           PN L   RA   + + + QR+  + SR+R  G      +        RRG   T   TT 
Sbjct: 171 PNALN--RAQSVQRLTQVQRTPSL-SRARTPGTPSDDGRWPANRGAARRGMSVTPEVTTN 227

Query: 215 RRRGSP 232
           R RGSP
Sbjct: 228 RMRGSP 233


>AY032851-1|AAK51129.1|  960|Drosophila melanogaster Cornetto
           protein.
          Length = 960

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = +2

Query: 35  PNLLRGPRAYGARGVCETQRSAGVESRSRAQGF*DPPTKRLPCHSYTRRGRGATAVNTTT 214
           PN L   RA   + + + QR+  + SR+R  G      +        RRG   T   TT 
Sbjct: 200 PNALN--RAQSVQRLTQVQRTPSL-SRARTPGTPSDDGRWPANRGAARRGMSVTPEVTTN 256

Query: 215 RRRGSP 232
           R RGSP
Sbjct: 257 RMRGSP 262


>AE014296-1202|AAF50605.2|  960|Drosophila melanogaster CG32386-PA
           protein.
          Length = 960

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = +2

Query: 35  PNLLRGPRAYGARGVCETQRSAGVESRSRAQGF*DPPTKRLPCHSYTRRGRGATAVNTTT 214
           PN L   RA   + + + QR+  + SR+R  G      +        RRG   T   TT 
Sbjct: 200 PNALN--RAQSVQRLTQVQRTPSL-SRARTPGTPSDDGRWPANRGAARRGMSVTPEVTTN 256

Query: 215 RRRGSP 232
           R RGSP
Sbjct: 257 RMRGSP 262


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,599,500
Number of Sequences: 53049
Number of extensions: 573583
Number of successful extensions: 2286
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2286
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)