Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_F17
(841 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 371 e-104
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 369 e-103
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 152 7e-38
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 85 2e-17
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 46 9e-06
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 37 0.003
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 36 0.009
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 32 0.12
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.15
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 31 0.15
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 30 0.36
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 30 0.36
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.47
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.62
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 0.82
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 1.1
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 2.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.4
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 4.4
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 4.4
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 27 4.4
SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccha... 27 4.4
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 26 5.8
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.8
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 26 7.6
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 371 bits (913), Expect = e-104
Identities = 170/237 (71%), Positives = 195/237 (82%), Gaps = 2/237 (0%)
Frame = -1
Query: 835 FMVDNEXIYDXCXRNXDMXAHLHQP-DCXIDRCXXD-HCFLRFDGALNVDLTEFQTNLVP 662
FMVDNE YD C RN D+ ++ + I + LRF G+LNVDL EFQTNLVP
Sbjct: 206 FMVDNEACYDICRRNLDIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVP 265
Query: 661 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 482
YPRIHFPLVTY+P++SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRG
Sbjct: 266 YPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRG 325
Query: 481 DVVPKDANAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 302
DV+P+D AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG +AKV RAVCMLSNT
Sbjct: 326 DVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNT 385
Query: 301 TAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 131
T+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 386 TSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 442
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 369 bits (908), Expect = e-103
Identities = 170/237 (71%), Positives = 194/237 (81%), Gaps = 2/237 (0%)
Frame = -1
Query: 835 FMVDNEXIYDXCXRNXDMXAHLHQP-DCXIDRCXXD-HCFLRFDGALNVDLTEFQTNLVP 662
FMVDNE YD C RN D+ ++ + I + LRF+G+LNVDL EFQTNLVP
Sbjct: 202 FMVDNESCYDICRRNLDIERPSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVP 261
Query: 661 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 482
YPRIHFPLVTYAP++SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRG
Sbjct: 262 YPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRG 321
Query: 481 DVVPKDANAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 302
DV+P+D AA+ TIK KRTIQFVDWCPTGFK+GI +PP + G ++AKV RAVCMLSNT
Sbjct: 322 DVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNT 381
Query: 301 TAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 131
T+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 382 TSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 438
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 152 bits (368), Expect = 7e-38
Identities = 75/199 (37%), Positives = 116/199 (58%), Gaps = 3/199 (1%)
Frame = -1
Query: 718 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 539
RF G LN DL + N+VP+PR+HF +V +AP+ + + + +SV E+T F+ N M
Sbjct: 241 RFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMM 300
Query: 538 VKCDPRHGKYMACCMLYRGDVVPKDANAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 359
V DPRHG+Y+ L+RG V K+ + I +++TK + FV+W P + PP
Sbjct: 301 VAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK- 359
Query: 358 VPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 179
DL + + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 360 ----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAE 412
Query: 178 ---EDLAALEKDYEEVGMD 131
DL + + Y+E G+D
Sbjct: 413 SNMNDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 84.6 bits (200), Expect = 2e-17
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Frame = -1
Query: 721 LRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS---AEKAYHEQLSVAEITNACFEP 551
LR+ G +N DL +L+P PR HF L +Y P + E + +V ++ P
Sbjct: 243 LRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLP 302
Query: 550 ANQMVKCDP-RHGKYMACCMLYRGDVVPKDANAAIATIKTKRTIQFVDWCPTGFKVGINY 374
NQMV +P + +++ + +G+ P D + ++ I+ +R F+ W P +V ++
Sbjct: 303 KNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSK 362
Query: 373 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE-- 200
+ P + ++ + ML+N T+IA + R ++D + + AF+ Y E + E
Sbjct: 363 KSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDD 417
Query: 199 -GEFSEAREDLAALEKDYE 146
EF +R+ +A L +YE
Sbjct: 418 LNEFDSSRDVVADLINEYE 436
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 45.6 bits (103), Expect = 9e-06
Identities = 55/207 (26%), Positives = 82/207 (39%), Gaps = 4/207 (1%)
Frame = -2
Query: 693 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRXTMNSFPLPRSQTHASSPPTRW*NAIPVMA 514
+S S+ +T + P STS S + NS PLP + T ++ +IP
Sbjct: 241 SSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTS-----TSIPPTG 295
Query: 513 STWLAVCCTVVTSYPRMRTRPSLPSKPSVLSNSSTGVQPVSRSVST-TSHPPWCPEATWP 337
++ V TV + + P P+ S SS+ + S S +T TS PP T
Sbjct: 296 NSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPV 355
Query: 336 RFNVP---SACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWL 166
VP ++ TPPP T+SS + S SCT TS + +S PV +
Sbjct: 356 TPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTST-SCT-TSTSIPPTGNSTTPVTPTV 413
Query: 165 PSKRITKKSAWTPLKARVREPKSTKPV 85
P + T P ++ PV
Sbjct: 414 PPTSSSTPLTTTNCTTSTSVPYTSTPV 440
Score = 34.3 bits (75), Expect = 0.022
Identities = 48/163 (29%), Positives = 65/163 (39%), Gaps = 15/163 (9%)
Frame = -2
Query: 660 TPVSTSHWSRTRQSSLPRRXTMNSFPLPRSQTHASS----PPTRW*NAIPVMASTWLAVC 493
TP+ T S T +S +S PLP + T ++ PPT +++ + +
Sbjct: 85 TPIITESTSSTSSASTTGS---SSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPT 141
Query: 492 CTVVTSYPRMRTRPSLP---SKP----SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPR 334
T TS P T S S P S +ST + P S S ++ P P T P
Sbjct: 142 STSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLST--PITP--TVPP 197
Query: 333 FNVPSACCPTPPPSLKL----GLALTTSSTSCTPSVLSCTGTS 217
+ S P PP S L T+STSCT S TG S
Sbjct: 198 TSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGS 240
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 37.1 bits (82), Expect = 0.003
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Frame = -2
Query: 474 YPRMRTRPSLP----SKPSVLSN-SSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 310
YP P+LP SKP V+ N V P +R + P+ ++P P+ C
Sbjct: 166 YPVSLPSPNLPHQPISKPPVIPNLPKLQVHP-NRLPHPIHNHPYSSPTSYPPPLCPATYC 224
Query: 309 PTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSP--KPVRTWLPSKRITKKSA 136
P+ PP L A+ SS S ++ + T + + P + WLP + T
Sbjct: 225 PSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMTQPT---- 280
Query: 135 WTPLKARVREPKS 97
+ P A V +P S
Sbjct: 281 FQPPSANVYQPAS 293
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 35.5 bits (78), Expect = 0.009
Identities = 53/194 (27%), Positives = 79/194 (40%), Gaps = 6/194 (3%)
Frame = -2
Query: 780 APTYTNLIVSLTDVSSITVF*-DSTAL*MWTSPSSRLTWCLTPVSTSHWSRTRQSSLPRR 604
A + TN S T SS T STA + SS + L +++ + + SS
Sbjct: 160 ASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAAS 219
Query: 603 XTMNSFPLPRSQTHASSPPTRW*NAIP--VMASTWLAVCCTVVTSYPRMRTRPSLPSKPS 430
+ S L S ++++ T ++I V +ST L + + T S S
Sbjct: 220 NSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTS 279
Query: 429 VLSNSST-GVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTS 253
L SST P+S + STT+ T ++ TP S+ + T +STS
Sbjct: 280 SLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTS 339
Query: 252 CTP--SVLSCTGTS 217
TP SV S T TS
Sbjct: 340 STPLSSVNSTTATS 353
Score = 31.5 bits (68), Expect = 0.15
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 2/151 (1%)
Frame = -2
Query: 660 TPVSTSH--WSRTRQSSLPRRXTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCT 487
TP+++S+ + T S+ N+ L S T +S+P + + AS+
Sbjct: 253 TPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVN 312
Query: 486 VVTSYPRMRTRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCP 307
T+ T S S + + +ST P+S STT+ T ++
Sbjct: 313 STTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASS 372
Query: 306 TPPPSLKLGLALTTSSTSCTPSVLSCTGTSV 214
TP S+ A + SST T S S T TSV
Sbjct: 373 TPLTSVNSTSATSASSTPLT-SANSTTSTSV 402
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 31.9 bits (69), Expect = 0.12
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -2
Query: 324 PSACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--KRI 151
P+ + P + G+ TS TS T S S++ S+P P W P+
Sbjct: 134 PATSSFSDPKAFSAGVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSA 193
Query: 150 TKKSAWTPLKARVREPKSTK 91
S+ TP+ V EP+ TK
Sbjct: 194 LGTSSKTPVYVVVDEPRFTK 213
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.5 bits (68), Expect = 0.15
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 486 VVTSYPRMRTRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 352
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -2
Query: 486 VVTSYPRMRTRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 352
VV P + RP++P P S PV V + PP P
Sbjct: 642 VVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 31.5 bits (68), Expect = 0.15
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = -2
Query: 441 SKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTS 262
S P+ S + PVS + T + PP A R N A P + + A T S
Sbjct: 1001 SMPAAKSKPAPMANPVSTAQQTQNRPP--APAMQARPNTTQAAAPVTSTTTTIKQATTVS 1058
Query: 261 STSCTPSVLSCTGTSVRVWRRESSP 187
++ PS ++ +S + S+P
Sbjct: 1059 ASKPAPSTVTSAASSPSNISKPSAP 1083
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 30.3 bits (65), Expect = 0.36
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 432 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGL-ALTTSST 256
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 255 SCTPSVLS 232
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 30.3 bits (65), Expect = 0.36
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 432 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGL-ALTTSST 256
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 255 SCTPSVLS 232
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.47
Identities = 27/111 (24%), Positives = 46/111 (41%)
Frame = -2
Query: 612 PRRXTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRMRTRPSLPSKP 433
PR S PLP A PP P ++ ++S + P+ P P
Sbjct: 343 PRSNAAGSIPLPPQGRSAPPPP-------PPRSAPSTGRQPPPLSSSRAVSNPPAPP--P 393
Query: 432 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLG 280
++ S+ + P+ + T++ P P + P + P + P+ PPSL +G
Sbjct: 394 AIPGRSAPALPPLGNASRTSTPPVPTPPSLPP--SAPPSLPPSAPPSLPMG 442
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.62
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = -2
Query: 480 TSYPRMRTRPSLP-SKPSVLSNSS--TGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 310
TS P PS P SKP S ++ V PV + +S+ + P P A P VPS
Sbjct: 983 TSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK-LSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 309 PTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPV 178
P P P+ + ++S P + + + S PV
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV 1085
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.1 bits (62), Expect = 0.82
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = -2
Query: 636 SRTRQSSLPRRXTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRMRT 457
S SSL + +++ SS PT+ ++ +ST +++ + +S +
Sbjct: 235 STLESSSLTNTVSPTESTFYETKSSTSSVPTQTIDSSSFTSSTPVSLTSSSTSSSGSSQD 294
Query: 456 RPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 364
++ S PS ++ S+ +QP + S TTS P
Sbjct: 295 STTIDSTPSTIATST--LQPTTSSPITTSAP 323
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 574 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDANAAI 449
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 446 SDGRVRILGYDVTTVQHTASHVLAMTGIAFHHLVGGLEACVCDLGNGKLFMVXLLGRDDW 625
S G +LGY ++ A++V+A + + HL+ G D K G D
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK-------GLDML 459
Query: 626 RVRDQWEVDTGVR 664
R Q+E++ G++
Sbjct: 460 VDRVQYELEAGLQ 472
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.4
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -2
Query: 441 SKPSVLSNSSTGVQP--VSRSVSTTSHPPWC--PEATWPRFNVPSACCPTPPP 295
S P+ S++GV VS S S PP P A P ++PS P PPP
Sbjct: 141 SAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPP 193
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 390 RSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTSCTPSVLS 232
++ S T+ P P ++ FN PSA P P++ + +T TPS S
Sbjct: 453 KAPSATTDKPSPPVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTT--TPSATS 503
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 4.4
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Frame = -2
Query: 687 PSSRLTWCLTPV--STSHWSRTRQSSLPRRXTMNSFPLPRSQTHASSPPTRW*NAIPVMA 514
P+S +T TPV S+S S S T S S T +SSP + IP
Sbjct: 246 PTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTTTGSATVSSSPFYSNSSVIPTSV 305
Query: 513 STWLAVCCTVVTSYPRMRTRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPR 334
+ ++ + +SY T S SV + + TG + S + TS PP+ ++
Sbjct: 306 PSSVSSFTSSSSSYTTTLTA----SNTSV-TYTGTG----TGSATFTSSPPFYSNSSVIP 356
Query: 333 FNVPSACCPTPPPSLKLGLALTTSSTSCT 247
+VPS+ + LT S+TS T
Sbjct: 357 TSVPSSVSSFTSSNSSYTTTLTASNTSIT 385
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 26.6 bits (56), Expect = 4.4
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = -2
Query: 483 VTSYPRMRTRPSLP--SKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 310
+T+ R T+P+ P S+ +N + S S+ S P +A +VP +
Sbjct: 498 LTNKARNATQPTQPPVSQVDYSNNLPPNLDTSSTFRSSASPPSAFTKAGNEALSVPLSGA 557
Query: 309 PTPPPSLKLGLALTTSSTSCTPSVLSCTGT 220
S LA SS S +L C GT
Sbjct: 558 RNTAASRPTNLAAGNSSASIVQQLLECGGT 587
>SPAC13G7.04c |mac1||membrane anchored protein Mac1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 756
Score = 26.6 bits (56), Expect = 4.4
Identities = 22/74 (29%), Positives = 29/74 (39%)
Frame = -2
Query: 489 TVVTSYPRMRTRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 310
+++ Y R S PS+ SVLS S V +CP T R PS
Sbjct: 276 SIIADYDEFRKSESSPSRSSVLSTSKPEVHETE---------GYCPHKTGNRPGFPSLNI 326
Query: 309 PTPPPSLKLGLALT 268
P P+ G+A T
Sbjct: 327 PRTRPT-TAGIANT 339
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 669 KLVWNSVRSTFRAPSNLKKQ*SXXHLSMXQSGWCR 773
K VW+S R S+ KK+ S HL + Q +C+
Sbjct: 125 KNVWDSPPKYIRVLSHNKKEKSLDHLFLAQELYCK 159
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 450 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 364
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 471 PRMRTRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPP 361
PR LP K VL T + VSR TTS P
Sbjct: 293 PRPLLNSKLPRKTLVLDLDETLIHSVSRGSRTTSGQP 329
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,420,842
Number of Sequences: 5004
Number of extensions: 77508
Number of successful extensions: 324
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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