Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_F06
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 125 4e-29
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 125 4e-29
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 125 4e-29
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 32 0.54
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 32 0.54
U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical pr... 31 0.95
U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical pr... 29 3.8
U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 29 3.8
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 29 5.1
Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical pr... 29 5.1
AC006644-5|AAF39834.1| 786|Caenorhabditis elegans Hypothetical ... 29 5.1
U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL033510-4|CAA22070.2| 343|Caenorhabditis elegans Hypothetical ... 28 6.7
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 125 bits (301), Expect = 4e-29
Identities = 68/175 (38%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Frame = -3
Query: 539 QQKADKIKLALERMREANIKKLFIKAFSMDGSSKSLLVDEKMTCGYVTRLLADKNHVNME 360
+ KA KI+ ALE+M+EA + K+F+K F DG + LL+DE+ T + LA+KNH+ +
Sbjct: 173 EAKAQKIRQALEKMKEAKVTKIFVKFFVEDGEALQLLIDERWTVADTLKQLAEKNHIALM 232
Query: 359 PKWAIVEHLPDLNMERVYEDHEMLVDNLMLWTRESKNKILFAERPDKISLFQAPEKFLL- 183
IVE P+L ++RVYEDHE +V+N+ +W ++S NK+ F RPDK + PE +LL
Sbjct: 233 EDHCIVEEYPELYIKRVYEDHEKVVENIQMWVQDSPNKLYFMRRPDKYAFISRPELYLLT 292
Query: 182 -NDNDRGRPSEQDDHSRQVMLEEFFGQNGAGASTVPSVSGHPVPPMEGPLYLKND 21
+D D + V ++F + VP P MEG LYLK+D
Sbjct: 293 PKTSDHMEIPSGDQWTIDVK-QKFVSEYFHREPVVP-------PEMEGFLYLKSD 339
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 125 bits (301), Expect = 4e-29
Identities = 68/175 (38%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Frame = -3
Query: 539 QQKADKIKLALERMREANIKKLFIKAFSMDGSSKSLLVDEKMTCGYVTRLLADKNHVNME 360
+ KA KI+ ALE+M+EA + K+F+K F DG + LL+DE+ T + LA+KNH+ +
Sbjct: 190 EAKAQKIRQALEKMKEAKVTKIFVKFFVEDGEALQLLIDERWTVADTLKQLAEKNHIALM 249
Query: 359 PKWAIVEHLPDLNMERVYEDHEMLVDNLMLWTRESKNKILFAERPDKISLFQAPEKFLL- 183
IVE P+L ++RVYEDHE +V+N+ +W ++S NK+ F RPDK + PE +LL
Sbjct: 250 EDHCIVEEYPELYIKRVYEDHEKVVENIQMWVQDSPNKLYFMRRPDKYAFISRPELYLLT 309
Query: 182 -NDNDRGRPSEQDDHSRQVMLEEFFGQNGAGASTVPSVSGHPVPPMEGPLYLKND 21
+D D + V ++F + VP P MEG LYLK+D
Sbjct: 310 PKTSDHMEIPSGDQWTIDVK-QKFVSEYFHREPVVP-------PEMEGFLYLKSD 356
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 125 bits (301), Expect = 4e-29
Identities = 68/175 (38%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Frame = -3
Query: 539 QQKADKIKLALERMREANIKKLFIKAFSMDGSSKSLLVDEKMTCGYVTRLLADKNHVNME 360
+ KA KI+ ALE+M+EA + K+F+K F DG + LL+DE+ T + LA+KNH+ +
Sbjct: 302 EAKAQKIRQALEKMKEAKVTKIFVKFFVEDGEALQLLIDERWTVADTLKQLAEKNHIALM 361
Query: 359 PKWAIVEHLPDLNMERVYEDHEMLVDNLMLWTRESKNKILFAERPDKISLFQAPEKFLL- 183
IVE P+L ++RVYEDHE +V+N+ +W ++S NK+ F RPDK + PE +LL
Sbjct: 362 EDHCIVEEYPELYIKRVYEDHEKVVENIQMWVQDSPNKLYFMRRPDKYAFISRPELYLLT 421
Query: 182 -NDNDRGRPSEQDDHSRQVMLEEFFGQNGAGASTVPSVSGHPVPPMEGPLYLKND 21
+D D + V ++F + VP P MEG LYLK+D
Sbjct: 422 PKTSDHMEIPSGDQWTIDVK-QKFVSEYFHREPVVP-------PEMEGFLYLKSD 468
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 254 KNKILFAERPDKISLFQAPEKFLLNDNDRGRPSEQDDHSRQ 132
KNK + I+LF+A LL DRG+P E+DD +
Sbjct: 470 KNKNVSMAARSLITLFRAVNPKLLARKDRGKPQEKDDEDEE 510
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 254 KNKILFAERPDKISLFQAPEKFLLNDNDRGRPSEQDDHSRQ 132
KNK + I+LF+A LL DRG+P E+DD +
Sbjct: 470 KNKNVSMAARSLITLFRAVNPKLLARKDRGKPQEKDDEDEE 510
>U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical
protein T13C5.2 protein.
Length = 434
Score = 31.1 bits (67), Expect = 0.95
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 43 PSIGGTGCPDTEGTVLAPAPFCPKNSSSITCLE*SSCSLGRPRSLSFSR-NFSGAWNNEI 219
P+ G T G + A PF P S CL +S S+ R R +SF R ++ +N++
Sbjct: 227 PTAVEAGIEYTLGLITAIFPFIPAGSCG--CLPMNSLSIWRDRVISFDRVCYAEIESNDL 284
Query: 220 LSGLSANNILFFDSLVHN 273
LS LS F S ++N
Sbjct: 285 LSLLSQVTEWFDASPLNN 302
>U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical
protein F46H5.7b protein.
Length = 575
Score = 29.1 bits (62), Expect = 3.8
Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Frame = -3
Query: 599 ECEMQSLKIEFTSNQKDASFQQKADKIKLALERMREANIK-KLFIKAFSMDGSSKSLLVD 423
+ + +++ I S +D+ ++K D+ LE++R N + K+ +K + D S+ L V
Sbjct: 147 DAQPENVNISEESEGRDSE-KEKNDR---QLEKLRNRNDELKIRVKEYKSDLSAAQLKVK 202
Query: 422 EKMTCGYVTRLLADKNHVNMEPKWAIVEHLPDLNMERVYEDHEMLVDNLMLWTRESKNKI 243
+ + L + E K+ ++ D E+ +DH+ ++NL E +NK+
Sbjct: 203 N------LEKKLESAQSADSEEKFVRIDSEID---EKRSQDHDEEINNLHNVIEELRNKL 253
Query: 242 LFAERPDK--ISLFQAPEKFLLNDNDR 168
E +K + F + +L N D+
Sbjct: 254 ATVESKNKDLETKFSENQDYLKNAKDK 280
>U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical
protein F46H5.7a protein.
Length = 572
Score = 29.1 bits (62), Expect = 3.8
Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Frame = -3
Query: 599 ECEMQSLKIEFTSNQKDASFQQKADKIKLALERMREANIK-KLFIKAFSMDGSSKSLLVD 423
+ + +++ I S +D+ ++K D+ LE++R N + K+ +K + D S+ L V
Sbjct: 147 DAQPENVNISEESEGRDSE-KEKNDR---QLEKLRNRNDELKIRVKEYKSDLSAAQLKVK 202
Query: 422 EKMTCGYVTRLLADKNHVNMEPKWAIVEHLPDLNMERVYEDHEMLVDNLMLWTRESKNKI 243
+ + L + E K+ ++ D E+ +DH+ ++NL E +NK+
Sbjct: 203 N------LEKKLESAQSADSEEKFVRIDSEID---EKRSQDHDEEINNLHNVIEELRNKL 253
Query: 242 LFAERPDK--ISLFQAPEKFLLNDNDR 168
E +K + F + +L N D+
Sbjct: 254 ATVESKNKDLETKFSENQDYLKNAKDK 280
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 82 TVLAPAPFCPKNSSSITCLE*SSC-SLGRPRSLSFSRNFSGAWNNEILSGLSANNILFFD 258
++ +P P P + +T L S S+ P S SFS+ +G E L A FF+
Sbjct: 605 SIFSPKPVKPAVTPKVTTLSDSPMGSVSGPPSSSFSKKSNGVRRKEHWGDLCAETYQFFE 664
Query: 259 SL 264
+
Sbjct: 665 KI 666
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 568 LHQIKRTRASNKRRTRLN*H*SACEKQISRNCS*KRFQWMDL 443
+ Q KR R +R +++ AC KQ+S++ R + MDL
Sbjct: 528 IQQAKRAREELERHAKVSMDIEACAKQLSKDAEDLRLEDMDL 569
>Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical
protein R107.4c protein.
Length = 816
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 568 LHQIKRTRASNKRRTRLN*H*SACEKQISRNCS*KRFQWMDL 443
+ Q KR R +R +++ AC KQ+S++ R + MDL
Sbjct: 528 IQQAKRAREELERHAKVSMDIEACAKQLSKDAEDLRLEDMDL 569
>Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical
protein R107.4b protein.
Length = 820
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 568 LHQIKRTRASNKRRTRLN*H*SACEKQISRNCS*KRFQWMDL 443
+ Q KR R +R +++ AC KQ+S++ R + MDL
Sbjct: 528 IQQAKRAREELERHAKVSMDIEACAKQLSKDAEDLRLEDMDL 569
>Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical
protein R107.4a protein.
Length = 754
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 568 LHQIKRTRASNKRRTRLN*H*SACEKQISRNCS*KRFQWMDL 443
+ Q KR R +R +++ AC KQ+S++ R + MDL
Sbjct: 528 IQQAKRAREELERHAKVSMDIEACAKQLSKDAEDLRLEDMDL 569
>AC006644-5|AAF39834.1| 786|Caenorhabditis elegans Hypothetical
protein F55A3.2 protein.
Length = 786
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 187 RNFSGAWNNEILSGLSANNILFFDSLVHNIKLSTNISW-SSYTRSILRSGKCSTIAH 354
R S + NEIL+ L N+I F D L + ++ TN T+S ++ C I++
Sbjct: 197 RGVSKSEANEILNSLKQNSIRFLDELEFSAEIVTNARMLDPSTQSTVQCHICDKISN 253
>U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical
protein K06A1.6 protein.
Length = 937
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 248 CFSILSSITLNCLLTFR 298
CFS+L+ + LNC TFR
Sbjct: 267 CFSLLAKLNLNCKTTFR 283
>AL033510-4|CAA22070.2| 343|Caenorhabditis elegans Hypothetical
protein Y40H7A.6 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +2
Query: 116 ILLASLALSDRLVHLDDPDRYRSVETFRGLGTTKSYLAFRQTIFCFSILSSITLNCLLTF 295
ILL + DR + D +F + TTKS L T FS LSS+ + F
Sbjct: 217 ILLCFIVKRDRRICHSIYDTNTRYSSFENVLTTKSILVIAVTHLIFSCLSSVAVTIARAF 276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,657,522
Number of Sequences: 27780
Number of extensions: 372456
Number of successful extensions: 1114
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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