Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_F01
(795 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 34 0.027
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 31 0.19
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.25
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.77
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 2.3
SPAC607.03c |snu13||U3 snoRNP-associated protein Snu13|Schizosac... 27 3.1
SPAC31A2.03 |mrpl11||mitochondrial ribosomal protein subunit L11... 27 3.1
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 27 3.1
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 27 4.1
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 4.1
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 27 4.1
SPBC1271.02 |stt3||oligosaccharyltransferase subunit Stt3|Schizo... 26 5.4
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 26 7.1
SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyce... 26 7.1
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 26 7.1
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 26 7.1
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 25 9.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 9.4
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 33.9 bits (74), Expect = 0.027
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3
Query: 373 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDH--RSRLTALPGPTARKFTASSRRN 200
S S P+T+ +SS + SS S +S S ++ PT+ T SS +
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSS 295
Query: 199 SSSQPTTGSSTL 164
SSS PT+ SST+
Sbjct: 296 SSSSPTSTSSTI 307
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -3
Query: 376 TSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNS 197
+S S + ++T+ +SS + +S S ++ S + ++ SS +S
Sbjct: 220 SSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSS 279
Query: 196 SSQPTTGSSTL 164
SS PT+ SST+
Sbjct: 280 SSSPTSTSSTI 290
Score = 26.2 bits (55), Expect = 5.4
Identities = 26/81 (32%), Positives = 40/81 (49%)
Frame = -3
Query: 376 TSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNS 197
+S+S T +++ +SS I + SS S P S S ++ PT+ T SS S
Sbjct: 257 SSSSSTASSSSSSSSIISSS--SSSSSSPTSTSSTISSSSSSS-SSPTSTSSTISS---S 310
Query: 196 SSQPTTGSSTLGVTHLRRGSS 134
SS ++ SSTL + + SS
Sbjct: 311 SSSSSSFSSTLSSSSMSSSSS 331
Score = 25.8 bits (54), Expect = 7.1
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = -3
Query: 379 LTSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALP-GPTARKFTASSRR 203
++S+S + ++ SS I + SS S P S S ++ T + SS
Sbjct: 273 ISSSSSSSSSPTSTSSTISSS--SSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSS 330
Query: 202 NSSSQPTTGSSTLGVTHLRRGSSA 131
+ SS PT+ SST+ + SS+
Sbjct: 331 SFSSSPTSSSSTISSSSSSPSSSS 354
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 31.1 bits (67), Expect = 0.19
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = -2
Query: 566 IRSTQKELEQQKEEYRKEHPDEVRDKDGEFDDWFESDGQRELRQIFQGQAQIHDVLRDLN 387
I+ +KEL+++KEE R H +++R + ++ RE ++ QA++H + D
Sbjct: 48 IKEREKELKREKEEQRAAHAEKIRTRR-------QAKADRERMELL--QAKLHQKVIDRR 98
Query: 386 KKVDERIK 363
++ ++R K
Sbjct: 99 RRREKRNK 106
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.7 bits (66), Expect = 0.25
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -3
Query: 361 TPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPT 182
T +T+ S+ I SS S P + + T++P P T+S+ NSS PT
Sbjct: 167 TTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTS--TSSTDTNSSPLPT 224
Query: 181 TGSSTLGVTHLRRGSSAHM 125
T +S T + G S+ +
Sbjct: 225 TSTSCTTSTSIPTGGSSSL 243
Score = 27.1 bits (57), Expect = 3.1
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = -3
Query: 376 TSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNS 197
TS S T +T+IP SS S P + + T++P P T+S+ NS
Sbjct: 225 TSTSCTTSTSIPTGGS-------SSLSTPITPTVPPTSTSSTSIPIPPTS--TSSTDTNS 275
Query: 196 SSQPTTGSS 170
S PTT +S
Sbjct: 276 SPLPTTSTS 284
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.1 bits (62), Expect = 0.77
Identities = 24/82 (29%), Positives = 38/82 (46%)
Frame = -3
Query: 373 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 194
S+S T TT P+SS SS S +S S ++ ++ ++SS +SS
Sbjct: 145 SSSSTTTTTSPSSS--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 196
Query: 193 SQPTTGSSTLGVTHLRRGSSAH 128
S ++ SS+ V SS+H
Sbjct: 197 SSSSSSSSSSSVPITSSTSSSH 218
Score = 25.8 bits (54), Expect = 7.1
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = -3
Query: 373 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 194
S+S +TT +SS + ++ + P+S S ++ ++ ++SS +SS
Sbjct: 128 SSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 187
Query: 193 SQPTTGSST 167
S ++ SS+
Sbjct: 188 SSSSSSSSS 196
Score = 25.4 bits (53), Expect = 9.4
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = -3
Query: 349 TIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPTTGSS 170
T +SS + + SS S P+S S ++ ++ ++SS +SSS ++ SS
Sbjct: 125 TTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 184
Query: 169 TLGVTHLRRGSSA 131
+ + SS+
Sbjct: 185 SSSSSSSSSSSSS 197
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -1
Query: 219 LPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQASS 64
L H +HR+P+P +R + +L + T+ A K + PQA S
Sbjct: 120 LLRHQQKIHRNPQPRRRRRSTTALPNPSLSNVSVSTTNLASKPVISLPQADS 171
>SPAC607.03c |snu13||U3 snoRNP-associated protein
Snu13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 125
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 350 HNPRILADKSTSLTVVPQQASIAASTGPSQPTHRAS 243
H P + DK+ VP +A++ + G S+P AS
Sbjct: 65 HLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISAS 100
>SPAC31A2.03 |mrpl11||mitochondrial ribosomal protein subunit
L11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 258 DSPRFLVLRHANSLPHHAATV 196
+SP FL+L+H N LP A ++
Sbjct: 34 ESPNFLILQHNNLLPREAKSL 54
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 27.1 bits (57), Expect = 3.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -3
Query: 379 LTSASR-TPATTIPASSQIKARH*QS----SHSKPASQPQQDHRSRLTALPGPTARKFTA 215
L ASR TP + + K +H +S S+ +P SQPQ ++ + P P + K
Sbjct: 230 LAQASRATPDIKEQHAKKPKRKHTRSTVPTSNVEPVSQPQPS-PDKIVSSPNPPSAKREK 288
Query: 214 SSRRNSS 194
RR SS
Sbjct: 289 KKRRKSS 295
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/85 (24%), Positives = 37/85 (43%)
Frame = -3
Query: 379 LTSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRN 200
+ S+ T +P S +RH S+ +KPA+ + + LP + + SR N
Sbjct: 96 VVSSKPNQTTAMPPPSNNPSRHVSSTSNKPAA-VSPNPAAHHAELPSGSVPPSASVSRAN 154
Query: 199 SSSQPTTGSSTLGVTHLRRGSSAHM 125
S++ TT GV ++ H+
Sbjct: 155 STA--TTTPHKAGVVSNPAAANVHV 177
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 4.1
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Frame = -3
Query: 376 TSASRTPATTIPASSQI-------KARH*QSSH---SKPASQPQQDHRSRLTALPGPTAR 227
+S + P+TT+P SS++ + + QSS S S + +++++P T+
Sbjct: 410 SSTKKIPSTTLPTSSKMITTTTPSVSNNTQSSFLIISTFTSSYEHSEPFKVSSVP-LTSN 468
Query: 226 KFTASSRRNSSSQPTTGSSTLGVTHL 149
F++ S ++SS P T SS L T L
Sbjct: 469 NFSSISHSSASSLPITPSSYLSNTTL 494
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -3
Query: 376 TSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNS 197
T+ T A + A S +H Q + S Q+ H + TA+ PTA
Sbjct: 171 TALPSTHANPVAAPSTATTQHTQLPKTSAVSH-QKPHEAPSTAVKAPTATVAENEPYPKP 229
Query: 196 SSQPTTGS 173
S PTT S
Sbjct: 230 QSVPTTTS 237
>SPBC1271.02 |stt3||oligosaccharyltransferase subunit
Stt3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 752
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/43 (20%), Positives = 20/43 (46%)
Frame = -1
Query: 303 PTASQHRSLNRTIAADSPRFLVLRHANSLPHHAATVHRSPRPD 175
P R+ N+ + + P+ + A + HH +++ +PD
Sbjct: 677 PNQGYDRARNQKLPSKDPQLFTIEEAFTTVHHLVRLYKVKKPD 719
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 7.1
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -3
Query: 343 PASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPTTGSSTL 164
P+SS + + +S SK QQ H +L K + R + S P + L
Sbjct: 932 PSSSPLSSSSLKSPLSKEGVLNQQGHEQYNFSLSPSIRNKLSPICRPSQGSSPKL-KNNL 990
Query: 163 GVTHLRRGSSAHMD 122
T R GS A +D
Sbjct: 991 SNTEERMGSRALLD 1004
>SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 342
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -1
Query: 321 HVIDSRPTASQHRSLNRTIAADSPRFLVLRHANSLPHHAATVHRSPR 181
H+ D P S R+ +RT++ S +L +RH + H++PR
Sbjct: 230 HMYD--PYTSPLRTPSRTLSRSSSHYLWVRHGKLTRSVSLLQHKTPR 274
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 425 GQAQIHDVLRDLNKKVDERIKNSGYHN 345
GQ ++DVL + K V + I+ GY N
Sbjct: 659 GQRNLYDVLYETQKVVRDIIRTEGYAN 685
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 425 GQAQIHDVLRDLNKKVDERIKNSGYHN 345
GQ ++DVL + K V + I+ GY N
Sbjct: 659 GQRNLYDVLYETQKVVRDIIRTEGYAN 685
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 9.4
Identities = 22/86 (25%), Positives = 36/86 (41%)
Frame = -3
Query: 373 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 194
SA+ + +T IP+S A +S S PAS + T+ + ++ R+S
Sbjct: 212 SATSSVSTVIPSSIISAAPPDSASESTPASTSYASSTTSATSTSTTSGSSGSSDWGRSSF 271
Query: 193 SQPTTGSSTLGVTHLRRGSSAHMDYW 116
+ +G+S V G SA W
Sbjct: 272 YEADSGTSDNIVFLNNMGGSAGSGVW 297
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 9.4
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -3
Query: 370 ASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSS 191
+S T PAS++++ SS S QP S ++P ++ + +S+ +SSS
Sbjct: 430 SSYVSTVTQPASTRVQTTT-VSSISTSVKQPTASVASSSVSVPSSSSVQPQSSTPISSSS 488
Query: 190 QPTTGSSTLGVT 155
++ STL +
Sbjct: 489 SASSPQSTLSTS 500
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,580,358
Number of Sequences: 5004
Number of extensions: 46649
Number of successful extensions: 231
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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