Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_F01
(795 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 33 0.35
01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617 32 0.46
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 31 0.80
11_04_0367 - 16840732-16843428,16844425-16844760 31 1.1
03_01_0168 + 1382531-1383931,1384028-1384150 31 1.1
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 31 1.4
09_01_0032 - 541411-541737,542751-543752 30 1.8
01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962 30 1.8
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170... 30 2.4
11_03_0047 - 9311913-9312659 30 2.4
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 30 2.4
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 30 2.4
08_02_0847 - 21828372-21828545,21829043-21829206,21829831-218299... 29 4.3
03_02_0137 + 5832608-5833590,5833680-5833731,5833827-5833904,583... 29 5.6
01_05_0809 - 25422832-25422919,25423887-25424443 29 5.6
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 29 5.6
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 28 7.4
04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376 28 9.8
04_04_0837 + 28547815-28547970,28548073-28548783 28 9.8
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 28 9.8
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 32.7 bits (71), Expect = 0.35
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -3
Query: 358 PATTIPASSQIKARH*Q--SSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQP 185
P +P S+I AR + S+ A D SRL LP +K +SS+ ++ S P
Sbjct: 624 PVELLPRCSEIVARQLELVESYQLLAETFGTDSNSRLQILPVKITKK--SSSKGSAGSMP 681
Query: 184 TTGSSTLGVTHLRRGSS 134
GSS L V+ GSS
Sbjct: 682 KQGSSDLIVSDNGGGSS 698
>01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617
Length = 507
Score = 32.3 bits (70), Expect = 0.46
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 292 PASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPTTGSST 167
PA QP Q + ++ + PT+ ++S R + SS+P +ST
Sbjct: 143 PAPQPVQPQQQLVSPVAAPTSSSSSSSDRSSGSSKPARATST 184
>01_06_0116 -
26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 31.5 bits (68), Expect = 0.80
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -2
Query: 563 RSTQKELEQQKEEYRKEHPDEVRDKDGEFDDWFESDGQREL-RQIFQGQAQIHDVLRDLN 387
R +KE E+QKE R+ D RD+D E D E + +E R+ + + + D R+
Sbjct: 190 REKEKEWERQKERERERGRDRERDRDREKDRERERERDKERDRERDRERERERDRERERE 249
Query: 386 KKVDERIKNSGY 351
++ D + Y
Sbjct: 250 RQKDREREKKDY 261
>11_04_0367 - 16840732-16843428,16844425-16844760
Length = 1010
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 506 DEVRDKDGEFDDWFESDGQRELRQIFQGQAQIHDVLRDL 390
DE D D + +F+ QR Q+F G +HD++ DL
Sbjct: 477 DERNDGDKNGNRYFDELVQRSFLQLFSGSCIMHDLIHDL 515
>03_01_0168 + 1382531-1383931,1384028-1384150
Length = 507
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 217 ASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHAR 104
A +RRN SS P+ ++ G+ H+ G +A + W+ R
Sbjct: 65 AGNRRNDSSPPSDDAAPTGLGHIVFGIAASSELWKSRR 102
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -2
Query: 554 QKELEQQKEEYRKEHPDEVRDK---DGEFDDWFESDGQRELRQIFQGQAQIHDVLRDLNK 384
QKE +++K +++K H + + K E D ESDG+ E R+ Q + R +
Sbjct: 183 QKEEKKEKRKHKKRHHHKSKSKRHHSSENSDSEESDGRDERRKSVQASEHKREEKRSRHD 242
Query: 383 KVD 375
K D
Sbjct: 243 KKD 245
>09_01_0032 - 541411-541737,542751-543752
Length = 442
Score = 30.3 bits (65), Expect = 1.8
Identities = 31/129 (24%), Positives = 48/129 (37%), Gaps = 14/129 (10%)
Frame = -2
Query: 470 WFESDGQRELRQIFQGQAQIHDVLRDLNKKVDERIKNSGYHNPRILADKSTSLTVVPQQA 291
WF DGQ L +F+ + + D ++ + ++ + RI+ T TVV +
Sbjct: 238 WFYGDGQINLGAMFRDKTGLQDTVKSWSFQMQRQF--------RIVKSNKTEYTVVCETE 289
Query: 290 SIAASTGPSQPTHRASWSYGT-QIH-CLIT----PQ--------QFIAAHDRIINAWGHT 153
P + W Q H CLI PQ Q + DR++NAW
Sbjct: 290 GCTFRLHGHVPKYEPYWIVSKLQEHSCLIRNTREPQPYRGICRKQTFSLKDRVLNAWSAE 349
Query: 152 SPAWQLCTH 126
W+ H
Sbjct: 350 ILGWRSLQH 358
>01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962
Length = 774
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = -3
Query: 343 PASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPTTGSSTL 164
PA+S + +S ++P Q + H SR + P P+ +K + + S +P T S
Sbjct: 657 PATSSLNNLLKRSEPAEPR-QARSSHSSRPASRPKPSGKKKISEHDTDKSRRPHTKKSAT 715
Query: 163 GVTHLRRGSS 134
+RR SS
Sbjct: 716 SPRKMRRLSS 725
>12_02_0248 +
16413295-16414394,16416511-16416762,16416839-16417055,
16417216-16417353,16417493-16417669,16417744-16417851,
16417925-16418392,16418493-16418570,16418673-16418756
Length = 873
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/65 (24%), Positives = 35/65 (53%)
Frame = -2
Query: 566 IRSTQKELEQQKEEYRKEHPDEVRDKDGEFDDWFESDGQRELRQIFQGQAQIHDVLRDLN 387
I +++L++++E +E + R+K+ E +W E + +RE + + + Q R+L
Sbjct: 740 IEDLERQLQEEREAREREREEREREKERERQEW-EQEKERECEERAREKEQDRKE-RELE 797
Query: 386 KKVDE 372
+K E
Sbjct: 798 RKERE 802
>11_03_0047 - 9311913-9312659
Length = 248
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 265 RSRLTALPGPTARKFTASSRRNSSSQPTTGSSTLGVTH 152
R ++ P P T+SS +S S PTTGS G+ H
Sbjct: 44 RELASSSPEPCRGLITSSSSSSSPSSPTTGSFCDGIDH 81
>10_08_0106 +
14842748-14843085,14843122-14843250,14844145-14844211,
14847177-14847324,14847998-14848097,14848306-14848384,
14848527-14848687,14848829-14848908,14849319-14849475,
14849575-14849723,14849909-14850076,14850426-14850719,
14851002-14851046,14851213-14851462,14851707-14851835,
14852799-14853039,14853977-14854642
Length = 1066
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 563 RSTQKELEQQKEEYRKEHPDEVRDKDGEFDDWFESDGQRELRQ 435
R ++E E+++E R + RD+D E D E D +RE R+
Sbjct: 783 RERERERERERERERDRDQNRDRDRDQERDRDRERDRERESRR 825
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 479 FDDWFESDGQRELRQIFQGQAQIHDVLR 396
FDDWF+ G+ + ++ Q Q+H VLR
Sbjct: 470 FDDWFQISGENDQHEVVQ---QLHKVLR 494
>08_02_0847 -
21828372-21828545,21829043-21829206,21829831-21829967,
21830909-21831241,21832067-21833244
Length = 661
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -1
Query: 198 VHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQASSSTGPCKLISA 34
+H + R H L SH++ A H + AF L++ P +++T PC L ++
Sbjct: 43 LHAALRSLHLSLSSHLAPFLASHLFHRD----AFALTIPPPDHTAATSPCALCAS 93
>03_02_0137 +
5832608-5833590,5833680-5833731,5833827-5833904,
5835228-5835347,5835618-5835716,5835821-5835975,
5836117-5836257,5836395-5836503
Length = 578
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -3
Query: 376 TSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTA---LPGPTARKFTASSR 206
T+ +RTP A++ +A + SKPAS+ + H S A +P A A
Sbjct: 5 TATARTPTKAAAAAAGGRAAGNTTPSSKPASRARLSHASSENAHPNIPAAAAAAAAAGEA 64
Query: 205 RNSSSQPT 182
S PT
Sbjct: 65 GTPSKNPT 72
>01_05_0809 - 25422832-25422919,25423887-25424443
Length = 214
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = -3
Query: 343 PASSQIKARH*QSSHSKPASQPQQD---HRSRLTALPGPTARKFTASSRRNSSSQPTTGS 173
P+S Q R H P+ HRSRL LP PTA T R + T S
Sbjct: 77 PSSQQRDGRRHHRHHGGVGGSPRYRLWLHRSRLEPLPTPTAAADTEEQRLRLENAVQTNS 136
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 479 FDDWFESDGQRELRQIFQGQAQIHDVLR 396
FD+WF+ G+ + +++ Q Q+H VLR
Sbjct: 416 FDEWFQISGENDQQEVVQ---QLHKVLR 440
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -2
Query: 554 QKELEQQKEEYRKEHPDEVRDKDGEFD-DWFESDGQRELRQIFQGQAQIHDVLRDLNKKV 378
+KE ++KE+ KE ++ RDK+ E + D + +++ I A H +D ++
Sbjct: 756 EKERRKEKEKKEKERKEKERDKEKEREKDKGKDRSRKDEMDIDAVDADSHG-SKDKKREK 814
Query: 377 DERIKNSGYHN 345
D+ K+ +H+
Sbjct: 815 DKEKKHKRHHH 825
>04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376
Length = 1135
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 335 LADKSTSLTVVPQQASIA-ASTGPSQPTHRASW 240
LAD T P+ SI AST PSQ H A W
Sbjct: 1036 LADFVAEWTPAPETVSIPEASTDPSQLPHTAHW 1068
>04_04_0837 + 28547815-28547970,28548073-28548783
Length = 288
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 551 KELEQQKEEYRKEHPDEVRDKDGEFDDWFESDGQRE 444
K ++ E +E +E D+DGE D+ E D +RE
Sbjct: 203 KRSREENGEDEEEEEEEGADEDGEDDEVEEDDEERE 238
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 298 SKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPTTGSSTL 164
S SQPQQ H ++P PT +A ++S P S +
Sbjct: 393 SSGGSQPQQTHPITKPSVPAPTVSGVSAGVSNSASQWPKVTQSDI 437
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,513,529
Number of Sequences: 37544
Number of extensions: 407652
Number of successful extensions: 1635
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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