Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_F01
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             28   0.11 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    27   0.20 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.46 
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    25   0.81 
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    24   1.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   7.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   10.0 

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -2

Query: 554 QKELEQQKEEYRKEHPDEVRDKDGEFDDWFESDG 453
           Q++ +QQ++E R+  PDE++ + GE  D F + G
Sbjct: 169 QQQRQQQRQEERRLRPDEIKVEVGE--DEFANGG 200



 Score = 22.2 bits (45), Expect = 5.7
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
 Frame = -3

Query: 310  QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPTTGSSTLGVTHLRRG-SS 134
            Q    +   QPQQ  +      P P  ++     ++    Q   G+ +  V  L+RG +S
Sbjct: 1507 QQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEYGAVSGLVVQLQRGYNS 1566

Query: 133  AHMDYWRHARSIQAQ 89
             +      A S Q Q
Sbjct: 1567 GNNRSGEQANSQQQQ 1581


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = -3

Query: 244 PGPTARKFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARS 101
           P P  R  +A S   SSS P  G++  G    R G   +    +  +S
Sbjct: 511 PSPNPRIASAPSSSTSSSPPAKGAAAAGQPSKRNGGETNKQELKRLKS 558



 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 347 NPRILADKSTSLTVVPQQASIAASTGPSQ 261
           NPRI +  S+S +  P     AA+  PS+
Sbjct: 514 NPRIASAPSSSTSSSPPAKGAAAAGQPSK 542


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 428 QGQAQIHDVLRDLNKKVDERIKNSGYHNPRILADKST 318
           Q   Q  D+LR+L KK+ +    +  H+ ++LA K T
Sbjct: 376 QNHPQHPDILRELLKKIPDLRTLNTLHSEKLLAFKMT 412


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 213 HHAATVHRSPRPDHQRLGSHISGVA 139
           HH   VHR  +P++  L S   G A
Sbjct: 26  HHNGVVHRDLKPENLLLASKAKGAA 50


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 562 GVPRRNWNSRRRNTGRNIPMR 500
           G+ R +W+ RR   G+  P+R
Sbjct: 2   GISRDHWHKRRATGGKRKPIR 22


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 213 HHAATVHRSPRPDHQR 166
           HH    HR  R D++R
Sbjct: 156 HHGMAYHRGHRKDYER 171


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -1

Query: 213 HHAATVHRSPRPDHQRLGSHISGVAALHTWT 121
           ++ A +   P P +    SHI    ++ T+T
Sbjct: 429 YNPALIQSQPSPQYPSTSSHILQQPSIRTYT 459


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,586
Number of Sequences: 438
Number of extensions: 3893
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)