Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_E22
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 203 7e-52
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 203 7e-52
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 72 2e-12
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 70 8e-12
BC004379-1|AAH04379.1| 273|Homo sapiens gap junction protein, b... 30 8.3
AL121988-5|CAB90271.1| 273|Homo sapiens gap junction protein, b... 30 8.3
AF099731-1|AAC95472.1| 273|Homo sapiens connexin 31.1 protein. 30 8.3
AF052693-1|AAD18005.1| 273|Homo sapiens connexin 31.1 protein. 30 8.3
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 203 bits (495), Expect = 7e-52
Identities = 109/217 (50%), Positives = 140/217 (64%), Gaps = 2/217 (0%)
Frame = -3
Query: 685 FISHK-IVQDTTPELRYKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKLQ 509
+I H IVQ P+LR KAA+LV+ K TLAARVD+ HEST+G +G +L++ IE+K DK Q
Sbjct: 273 YIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQ 332
Query: 508 EXXXXXXXXXXXXPIEQSXXXXXXXXXXXXXXRYAMTEFRKNANRLNFADIEDDAYQEDL 329
E P++ R +TE RK ANR++F +IE+DAYQEDL
Sbjct: 333 EPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDL 392
Query: 328 GYTRGTIGKSSTGRIRLPQIDEKTKVRISKT-XXXXXXXXXQYGGATSIRRQVSGTASSV 152
G++ G +GKS +GR+R Q++E TK RISKT YGG ++IR + SGTASSV
Sbjct: 393 GFSLGHLGKSGSGRVRQTQVNEATKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSV 452
Query: 151 AFTPLQGLEIVNPQAAETRTNEGNAKYFSNTSGFLSV 41
AFTPLQGLEIVNPQAAE + E N KYFS+ + FL V
Sbjct: 453 AFTPLQGLEIVNPQAAEKKVAEANQKYFSSMAEFLKV 489
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 203 bits (495), Expect = 7e-52
Identities = 109/217 (50%), Positives = 140/217 (64%), Gaps = 2/217 (0%)
Frame = -3
Query: 685 FISHK-IVQDTTPELRYKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKLQ 509
+I H IVQ P+LR KAA+LV+ K TLAARVD+ HEST+G +G +L++ IE+K DK Q
Sbjct: 273 YIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQ 332
Query: 508 EXXXXXXXXXXXXPIEQSXXXXXXXXXXXXXXRYAMTEFRKNANRLNFADIEDDAYQEDL 329
E P++ R +TE RK ANR++F +IE+DAYQEDL
Sbjct: 333 EPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDL 392
Query: 328 GYTRGTIGKSSTGRIRLPQIDEKTKVRISKT-XXXXXXXXXQYGGATSIRRQVSGTASSV 152
G++ G +GKS +GR+R Q++E TK RISKT YGG ++IR + SGTASSV
Sbjct: 393 GFSLGHLGKSGSGRVRQTQVNEATKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSV 452
Query: 151 AFTPLQGLEIVNPQAAETRTNEGNAKYFSNTSGFLSV 41
AFTPLQGLEIVNPQAAE + E N KYFS+ + FL V
Sbjct: 453 AFTPLQGLEIVNPQAAEKKVAEANQKYFSSMAEFLKV 489
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 72.1 bits (169), Expect = 2e-12
Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = -3
Query: 685 FISHK-IVQDTTPELRYKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKLQ 509
+I H IVQ P+LR KAA+LV+ K TLAARVD+ HEST+G +G +L++ IE+K DK Q
Sbjct: 193 YIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQ 252
Query: 508 E 506
E
Sbjct: 253 E 253
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 70.1 bits (164), Expect = 8e-12
Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = -3
Query: 685 FISHK-IVQDTTPELRYKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKLQ 509
+I H IVQ P+LR KAA+LV+ K TLAARVD+ HEST+G +G +L++ IE+K DK Q
Sbjct: 273 YIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQ 332
>BC004379-1|AAH04379.1| 273|Homo sapiens gap junction protein, beta
5 protein.
Length = 273
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 505 VPVVYLVSFRCFPAVADRCAHRCSRGTRPHG 597
V ++YLVS RC +A R A G PHG
Sbjct: 203 VELIYLVSKRCHECLAARKAQAMCTGHHPHG 233
>AL121988-5|CAB90271.1| 273|Homo sapiens gap junction protein, beta
5 protein.
Length = 273
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 505 VPVVYLVSFRCFPAVADRCAHRCSRGTRPHG 597
V ++YLVS RC +A R A G PHG
Sbjct: 203 VELIYLVSKRCHECLAARKAQAMCTGHHPHG 233
>AF099731-1|AAC95472.1| 273|Homo sapiens connexin 31.1 protein.
Length = 273
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 505 VPVVYLVSFRCFPAVADRCAHRCSRGTRPHG 597
V ++YLVS RC +A R A G PHG
Sbjct: 203 VELIYLVSKRCHECLAARKAQAMCTGHHPHG 233
>AF052693-1|AAD18005.1| 273|Homo sapiens connexin 31.1 protein.
Length = 273
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 505 VPVVYLVSFRCFPAVADRCAHRCSRGTRPHG 597
V ++YLVS RC +A R A G PHG
Sbjct: 203 VELIYLVSKRCHECLAARKAQAMCTGHHPHG 233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,867,909
Number of Sequences: 237096
Number of extensions: 1563262
Number of successful extensions: 3689
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3685
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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