Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_E09
(818 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.4
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.2
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 27 3.2
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.2
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 27 4.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 5.6
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.6
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-... 26 7.4
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 7.4
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 26 7.4
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.8
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.8
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.8
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 99 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 227
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 254 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 159
CY P + + L ++I+T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 27.1 bits (57), Expect = 3.2
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = -3
Query: 711 SSHPPLXXRXHQPDHQ-IPXFQTPTTPDLTSISINPLTP-Y*KEFAPGLKPPLSSEAPSA 538
+S PP QP HQ F TPT P T +S +P + + PLS +A S
Sbjct: 120 NSSPP-NSLSSQPKHQEFHLFHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAAS- 177
Query: 537 YLTPSSLGMXKGVSPPYFQVNDESQA 460
LT S L + SPP V +S +
Sbjct: 178 -LTSSPLKDFQS-SPPLSTVLQKSHS 201
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.2
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -1
Query: 353 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 174
K K+ D V K + +S T+ +V + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 173 LSASIQASLPSSEIYRQL 120
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 26.6 bits (56), Expect = 4.2
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -3
Query: 669 HQIPXFQTPTTPDLTSISINPLTP-----Y*KEFAPGLKPPLSSEAPSAYL 532
H P P+TP + SI+P TP Y + A L PLS + +AYL
Sbjct: 295 HCSPIDARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVGSTTAYL 345
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 5.6
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = -3
Query: 720 PYXSSHPPLXXRXHQPDHQIPXFQTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 541
P +S PP+ + +P P P + S L P + PP S+AP
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPV 211
Query: 540 AYLT--PSSLGMXKGVSP 493
A + PSS G +P
Sbjct: 212 ANTSSRPSSFAPPAGHAP 229
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 464 KLRALLVVIPRILRSPPPTHPLIEDV 387
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
L-lysine forming] |Schizosaccharomyces pombe|chr
1|||Manual
Length = 368
Score = 25.8 bits (54), Expect = 7.4
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = -3
Query: 675 PDHQIPXFQTPTTPDLTSISIN------PLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLG 514
P++ IP + TT D ++ + PL + P L P SSEA S L PS L
Sbjct: 285 PNNPIPIYNVNTTFDHPTVEVKGVTTPPPLEVISIDHLPTLLPRESSEAFSEALIPSLLA 344
Query: 513 M 511
+
Sbjct: 345 L 345
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 141 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 43
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 718 LXIKPPSPXXSXTSTRSSNPXIPNTNHPRLNIHFHQS 608
L + P +P S S N + TN P LN HF QS
Sbjct: 346 LGLDPKNPSASFPRVVSQNNML--TNKPVLNNHFQQS 380
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 329 LVTHKELALKVSSIIGTRVYVFDPSCY 249
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 469 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 383
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 114 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 215
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,948,408
Number of Sequences: 5004
Number of extensions: 58550
Number of successful extensions: 187
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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