Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_E09
         (818 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ986374-1|ABJ15760.1|  447|Homo sapiens T-box transcription fac...    33   0.94 
BT009758-1|AAP88760.1|  577|Homo sapiens protein tyrosine phosph...    31   5.0  
BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine phosph...    31   5.0  
BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.       31   5.0  
BC004881-1|AAH04881.2|  619|Homo sapiens PTPN23 protein protein.       31   5.0  
AL110210-1|CAB53676.1|  990|Homo sapiens hypothetical protein pr...    31   5.0  
AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosph...    31   5.0  
AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosph...    31   5.0  
X70944-1|CAA50283.1|  707|Homo sapiens PTB-associated splicing f...    31   6.6  
BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor proline...    31   6.6  
BC027708-1|AAH27708.1|  525|Homo sapiens SFPQ protein protein.         31   6.6  
AL590434-2|CAI12467.1|  707|Homo sapiens splicing factor proline...    31   6.6  
BC004534-1|AAH04534.2|  634|Homo sapiens SFPQ protein protein.         30   8.8  

>DQ986374-1|ABJ15760.1|  447|Homo sapiens T-box transcription factor
           TBX20 isoform A protein.
          Length = 447

 Score = 33.5 bits (73), Expect = 0.94
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -2

Query: 706 PPSPXXSXTSTRSSNPXIPNTNHPRLNIHFHQSPDAVLEGVR 581
           P +P    +S + S P  P+ + PR + +F Q P A ++G+R
Sbjct: 396 PLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGPYAAIQGLR 437


>BT009758-1|AAP88760.1|  577|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 23 protein.
          Length = 577

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -3

Query: 663 IPXFQTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 487
           +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 470 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 528

Query: 486 FQVNDESQASRLISRHS 436
           F ++   +  + +S+H+
Sbjct: 529 FSLDSSLRGKQRMSKHN 545


>BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine
            phosphatase, non-receptor type 23 protein.
          Length = 1636

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -3

Query: 663  IPXFQTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 487
            +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 1529 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 1587

Query: 486  FQVNDESQASRLISRHS 436
            F ++   +  + +S+H+
Sbjct: 1588 FSLDSSLRGKQRMSKHN 1604


>BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.
          Length = 1320

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -3

Query: 663  IPXFQTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 487
            +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 1213 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 1271

Query: 486  FQVNDESQASRLISRHS 436
            F ++   +  + +S+H+
Sbjct: 1272 FSLDSSLRGKQRMSKHN 1288


>BC004881-1|AAH04881.2|  619|Homo sapiens PTPN23 protein protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -3

Query: 663 IPXFQTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 487
           +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 512 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 570

Query: 486 FQVNDESQASRLISRHS 436
           F ++   +  + +S+H+
Sbjct: 571 FSLDSSLRGKQRMSKHN 587


>AL110210-1|CAB53676.1|  990|Homo sapiens hypothetical protein
            protein.
          Length = 990

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -3

Query: 663  IPXFQTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 487
            +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 883  LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 941

Query: 486  FQVNDESQASRLISRHS 436
            F ++   +  + +S+H+
Sbjct: 942  FSLDSSLRGKQRMSKHN 958


>AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosphatase
            TD14 protein.
          Length = 1636

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -3

Query: 663  IPXFQTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 487
            +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 1529 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 1587

Query: 486  FQVNDESQASRLISRHS 436
            F ++   +  + +S+H+
Sbjct: 1588 FSLDSSLRGKQRMSKHN 1604


>AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosphatase
            HD-PTP protein.
          Length = 1636

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -3

Query: 663  IPXFQTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 487
            +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 1529 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 1587

Query: 486  FQVNDESQASRLISRHS 436
            F ++   +  + +S+H+
Sbjct: 1588 FSLDSSLRGKQRMSKHN 1604


>X70944-1|CAA50283.1|  707|Homo sapiens PTB-associated splicing
           factor protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 25/78 (32%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
 Frame = -3

Query: 720 PYXSSHPPLXXRXHQPDHQIPXFQTPTTPDLTSISINPLTPY*KEFAPGL--KPPLSSEA 547
           P     PP     HQP       Q    P     S  P+       APG+   PP SS A
Sbjct: 72  PPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSA 131

Query: 546 PSAYLTPSSLGMXKGVSP 493
           P A  TP + G   G  P
Sbjct: 132 PPA--TPPTSGAPPGSGP 147


>BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor
           proline/glutamine-rich (polypyrimidine tract binding
           protein as protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 25/78 (32%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
 Frame = -3

Query: 720 PYXSSHPPLXXRXHQPDHQIPXFQTPTTPDLTSISINPLTPY*KEFAPGL--KPPLSSEA 547
           P     PP     HQP       Q    P     S  P+       APG+   PP SS A
Sbjct: 72  PPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSTPPASSSA 131

Query: 546 PSAYLTPSSLGMXKGVSP 493
           P A  TP + G   G  P
Sbjct: 132 PPA--TPPTSGAPPGSGP 147


>BC027708-1|AAH27708.1|  525|Homo sapiens SFPQ protein protein.
          Length = 525

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 25/78 (32%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
 Frame = -3

Query: 720 PYXSSHPPLXXRXHQPDHQIPXFQTPTTPDLTSISINPLTPY*KEFAPGL--KPPLSSEA 547
           P     PP     HQP       Q    P     S  P+       APG+   PP SS A
Sbjct: 72  PPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSA 131

Query: 546 PSAYLTPSSLGMXKGVSP 493
           P A  TP + G   G  P
Sbjct: 132 PPA--TPPTSGAPPGSGP 147


>AL590434-2|CAI12467.1|  707|Homo sapiens splicing factor
           proline/glutamine-rich (polypyrimidine tract binding
           protein as protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 25/78 (32%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
 Frame = -3

Query: 720 PYXSSHPPLXXRXHQPDHQIPXFQTPTTPDLTSISINPLTPY*KEFAPGL--KPPLSSEA 547
           P     PP     HQP       Q    P     S  P+       APG+   PP SS A
Sbjct: 72  PPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSA 131

Query: 546 PSAYLTPSSLGMXKGVSP 493
           P A  TP + G   G  P
Sbjct: 132 PPA--TPPTSGAPPGSGP 147


>BC004534-1|AAH04534.2|  634|Homo sapiens SFPQ protein protein.
          Length = 634

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 24/72 (33%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
 Frame = -3

Query: 702 PPLXXRXHQPDHQIPXFQTPTTPDLTSISINPLTPY*KEFAPGL--KPPLSSEAPSAYLT 529
           PP     HQP       Q    P     S  P+       APG+   PP SS AP A  T
Sbjct: 5   PPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPA--T 62

Query: 528 PSSLGMXKGVSP 493
           P + G   G  P
Sbjct: 63  PPTSGAPPGSGP 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,725,351
Number of Sequences: 237096
Number of extensions: 2245373
Number of successful extensions: 9995
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9993
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)