Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_D18
         (849 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    74   8e-13
L38431-1|AAB00153.1|  141|Homo sapiens protein ( Homo sapiens Ig...    30   9.2  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 73.7 bits (173), Expect = 8e-13
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = +1

Query: 292 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC*K 402
           MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>L38431-1|AAB00153.1|  141|Homo sapiens protein ( Homo sapiens Ig
           rearranged H-chain mRNA V region. ).
          Length = 141

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -1

Query: 729 LTRLGGSVARSIXSAGARCFRSKRAEW*RXGNARRRLKLPGVIRFEDTARPGSLTGAVHL 550
           L + GGS+  S  S+G   F +    W R    +    + G+    DT  PGS+ G   +
Sbjct: 30  LVQPGGSLRLSCASSGFT-FNTYDMHWVRQATGKGLEWVSGIRTAGDTYYPGSVKGRFTI 88

Query: 549 SKNNA 535
           S+ NA
Sbjct: 89  SRENA 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,652,262
Number of Sequences: 237096
Number of extensions: 2663940
Number of successful extensions: 8632
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8627
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)