Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_D06
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   150   1e-36
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      29   3.1  
AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical ...    29   3.1  
U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical ...    28   7.2  
AC084153-15|AAK84589.2|  152|Caenorhabditis elegans Hypothetical...    28   7.2  
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    28   9.5  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    28   9.5  
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    28   9.5  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  150 bits (364), Expect = 1e-36
 Identities = 67/118 (56%), Positives = 86/118 (72%), Gaps = 5/118 (4%)
 Frame = -1

Query: 693 GATPIAERFTPGVFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPL 514
           GAT I  RF+PG  TNQIQ  F+EPRLL++ DP  DHQ +TEASYV +PVI+  NT+SPL
Sbjct: 95  GATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPL 154

Query: 513 RFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRW-----DVVVDLFFYRDP 355
           + +DI +PCN K   SIGLMWW+LARE+L LRG + R   +     +++ DL+FYRDP
Sbjct: 155 KLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDP 212



 Score = 31.1 bits (67), Expect = 1.0
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = -3

Query: 820 TXEKLFWLXGAXVAIREPXLRVCHFHQGPFGXXXVLKFAAHTRCYAYCGTFHTRC 656
           T EKL     A  A+  P   V      P+    +LKFAAHT   A  G F   C
Sbjct: 54  TWEKLLLAARAIAAVENPA-DVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGC 107


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 668  SHQVF-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 516
            SH+V   + + +LHS+NL + LYW L + +  +     S F+ +LC     H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 668  SHQVF-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 516
            SH+V   + + +LHS+NL + LYW L + +  +     S F+ +LC     H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 668  SHQVF-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 516
            SH+V   + + +LHS+NL + LYW L + +  +     S F+ +LC     H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 668  SHQVF-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 516
            SH+V   + + +LHS+NL + LYW L + +  +     S F+ +LC     H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399


>AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical
           protein F39C12.4 protein.
          Length = 103

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -1

Query: 213 CCTRCSSCFWSTPCSRRMVCP 151
           CCT    CF ST CS   VCP
Sbjct: 53  CCTN-EECFMSTECSYSAVCP 72


>U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical
           protein C25F6.8 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 534 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 427
           CNTD+  R +     CNT   + +G+ + L+AR ++
Sbjct: 49  CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81


>AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical
           protein Y45F3A.8 protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -3

Query: 562 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 455
           +C+HS    +      K CGHC PM   +HQ  P +  D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380


>AC084153-15|AAK84589.2|  152|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.15 protein.
          Length = 152

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = -1

Query: 693 GATPIAERFTPGVFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPL 514
           G  P+A    P       Q A+ +P ++     A   Q  T+A+ +    +   + D P 
Sbjct: 29  GGAPVAVEMQPVYAAYPQQQAYGQPTVV----QAHVVQQPTQATVIISASVKHVDQDKP- 83

Query: 513 RFVDIAIPCNT----KSSHSIGLMWWLL 442
            +++    C T    ++ HSIG  WW++
Sbjct: 84  -YLEYCPRCQTSVTTRTVHSIGTCWWII 110


>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
            protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +2

Query: 164  LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 259
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 483 TKSSHSIGLMWWLLA 439
           T+  H IG+MWWL A
Sbjct: 72  TRVEHKIGIMWWLCA 86


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +2

Query: 164  LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 259
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,703,773
Number of Sequences: 27780
Number of extensions: 363890
Number of successful extensions: 1050
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)