Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_D01
         (829 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M98776-1|AAB47721.1|  644|Homo sapiens keratin 1 protein.              31   3.9  
M10938-1|AAA36153.1|  493|Homo sapiens protein ( Human epidermal...    31   3.9  
BC063697-1|AAH63697.1|  644|Homo sapiens keratin 1 (epidermolyti...    31   3.9  
AF304164-1|AAG41947.1|  644|Homo sapiens keratin 1 protein.            31   3.9  
AF237621-1|AAF60327.1|  644|Homo sapiens keratin 1 protein.            31   3.9  

>M98776-1|AAB47721.1|  644|Homo sapiens keratin 1 protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 24/78 (30%), Positives = 25/78 (32%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G GGG G GR             + G          GGGG G    G   G  
Sbjct: 533 GSGGGSYGSGGGGGGGRGSYGSGGS-----SYGSGGGSYGSGGGGGGHGSYGSGSSSGGY 587

Query: 648 RXXXGGGXXXXSXXXXSG 595
           R   GGG    S    SG
Sbjct: 588 RGGSGGGGGGSSGGRGSG 605


>M10938-1|AAA36153.1|  493|Homo sapiens protein ( Human epidermal
           67-kDa type II keratin mRNA. ).
          Length = 493

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 24/78 (30%), Positives = 25/78 (32%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G GGG G GR             + G          GGGG G    G   G  
Sbjct: 382 GSGGCSYGSGGGGGGGRGSYGSGGS-----SYGSGGSSYGSGGGGGGHGSYGSGSSSGGY 436

Query: 648 RXXXGGGXXXXSXXXXSG 595
           R   GGG    S    SG
Sbjct: 437 RGGSGGGGGGSSGGRGSG 454


>BC063697-1|AAH63697.1|  644|Homo sapiens keratin 1 (epidermolytic
           hyperkeratosis) protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 24/78 (30%), Positives = 25/78 (32%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G GGG G GR             + G          GGGG G    G   G  
Sbjct: 533 GSGGGSYGSGGGGGGGRGSYGSGGS-----SYGSGGGSYGSGGGGGGHGSYGSGSSSGGY 587

Query: 648 RXXXGGGXXXXSXXXXSG 595
           R   GGG    S    SG
Sbjct: 588 RGGSGGGGGGSSGGRGSG 605


>AF304164-1|AAG41947.1|  644|Homo sapiens keratin 1 protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 24/78 (30%), Positives = 25/78 (32%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G GGG G GR             + G          GGGG G    G   G  
Sbjct: 533 GSGGGSYGSGGGGGGGRGSYGSGGS-----SYGSGGGSYGSGGGGGGHGSYGSGSSSGGY 587

Query: 648 RXXXGGGXXXXSXXXXSG 595
           R   GGG    S    SG
Sbjct: 588 RGGSGGGGGGSSGGRGSG 605


>AF237621-1|AAF60327.1|  644|Homo sapiens keratin 1 protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 24/78 (30%), Positives = 25/78 (32%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G GGG G GR             + G          GGGG G    G   G  
Sbjct: 533 GSGGGSYGSGGGGGGGRGSYGSGGS-----SYGSGGGSYGSGGGGGGHGSYGSGSSSGGY 587

Query: 648 RXXXGGGXXXXSXXXXSG 595
           R   GGG    S    SG
Sbjct: 588 RGGSGGGGGGSSGGRGSG 605


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,793,664
Number of Sequences: 237096
Number of extensions: 928216
Number of successful extensions: 4905
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4268
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)