Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_D01
         (829 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    35   0.082
U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase prot...    32   0.44 
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    31   1.3  
L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family ...    30   2.3  
AF022983-5|AAK82915.1|   79|Caenorhabditis elegans Hypothetical ...    29   5.4  
AL117204-23|CAB55137.1|  285|Caenorhabditis elegans Hypothetical...    28   7.1  
L25598-4|AAV58888.1|  737|Caenorhabditis elegans Calpain family ...    28   9.4  

>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 34.7 bits (76), Expect = 0.082
 Identities = 22/67 (32%), Positives = 22/67 (32%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G G G G GR                       G RGGGG G    G GGG  
Sbjct: 52  GPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGR 111

Query: 648 RXXXGGG 628
               GGG
Sbjct: 112 GGGGGGG 118



 Score = 31.9 bits (69), Expect = 0.58
 Identities = 22/67 (32%), Positives = 23/67 (34%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G GGG G G        +       G       G  GGGG G    G GGG  
Sbjct: 56  GRGGGGSGWGGGRGGGWGNNGGGGNW---GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRG 112

Query: 648 RXXXGGG 628
               GGG
Sbjct: 113 GGGGGGG 119



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = -2

Query: 708 GXRGGGGXG*AX*GXGGGXXRXXXGGG 628
           G RGGGG G    G GGG  R   GGG
Sbjct: 102 GGRGGGGGGRGG-GGGGGGGRGGGGGG 127


>U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase protein
           4 protein.
          Length = 751

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 19/66 (28%), Positives = 21/66 (31%)
 Frame = -3

Query: 806 GXXGGXXXAXEXPRXXXXDXEXXRGGXXLXXXRDXGGXGGXXEXGEXRXEGXGXXXWGGG 627
           G   G        R      +  RGG       D GG GG    G    +  G   WGGG
Sbjct: 656 GTTAGSVAPVAQVRQTNPSRQPPRGGWGRDDFGDNGGWGGNGGGGWGNNDPWGGSRWGGG 715

Query: 626 RXXXPG 609
           R    G
Sbjct: 716 RGGWGG 721


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 21/65 (32%), Positives = 22/65 (33%)
 Frame = -2

Query: 822 GXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXXRX 643
           G    G GGG G G    +       V   G       G  GGGG   A  G GG     
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGG 216

Query: 642 XXGGG 628
             GGG
Sbjct: 217 SSGGG 221



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 22/67 (32%), Positives = 23/67 (34%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G GGG G G              + G       G  GGGG G    G GGG  
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGG------SSGGCGGGSSGGCGGGGGGGCGGGGGGGCG 172

Query: 648 RXXXGGG 628
               GGG
Sbjct: 173 GGSSGGG 179



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 21/67 (31%), Positives = 21/67 (31%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G G G G G                G       G  GGGG G    G GGG  
Sbjct: 56  GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115

Query: 648 RXXXGGG 628
               GGG
Sbjct: 116 GCGGGGG 122


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 21/65 (32%), Positives = 22/65 (33%)
 Frame = -2

Query: 822 GXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXXRX 643
           G    G GGG G G    +       V   G       G  GGGG   A  G GG     
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGG 216

Query: 642 XXGGG 628
             GGG
Sbjct: 217 SSGGG 221



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 22/67 (32%), Positives = 23/67 (34%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G GGG G G              + G       G  GGGG G    G GGG  
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGG------SSGGCGGGSSGGCGGGGGGGCGGGGGGGCG 172

Query: 648 RXXXGGG 628
               GGG
Sbjct: 173 GGSSGGG 179



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 21/67 (31%), Positives = 21/67 (31%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G G G G G                G       G  GGGG G    G GGG  
Sbjct: 56  GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115

Query: 648 RXXXGGG 628
               GGG
Sbjct: 116 GCGGGGG 122


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 2/84 (2%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGG--GXG*AX*GXGGG 655
           G G    G GGG G G              A G       G  GGG  G G    G GGG
Sbjct: 87  GGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGG 146

Query: 654 XXRXXXGGGXXXXSXXXXSGXEXC 583
                 GGG          G   C
Sbjct: 147 GGCGGGGGGCGGGGGGCGGGGGGC 170



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 22/67 (32%), Positives = 22/67 (32%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G GGG G G                G       G  GGGG G    G GGG  
Sbjct: 121 GCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCG--GGGGGGC 178

Query: 648 RXXXGGG 628
               GGG
Sbjct: 179 GGGGGGG 185



 Score = 27.9 bits (59), Expect = 9.4
 Identities = 20/67 (29%), Positives = 20/67 (29%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G G G G                  G       G  GGGG G    G GGG  
Sbjct: 38  GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 97

Query: 648 RXXXGGG 628
               GGG
Sbjct: 98  GCGGGGG 104


>L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family
           protein 1, isoform d protein.
          Length = 759

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 21/67 (31%), Positives = 21/67 (31%)
 Frame = -2

Query: 828 GEGXXXXGXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXX 649
           G G    G GGG G G                G       G   GGG G    G GGG  
Sbjct: 54  GGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQ 113

Query: 648 RXXXGGG 628
               GGG
Sbjct: 114 GGGGGGG 120



 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = -2

Query: 732 GXXAXXXEGXRGGGGXG*AX*GXGGGXXRXXXGGG 628
           G  A    G  GGGG G    G GGG      GGG
Sbjct: 44  GGLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGG 78


>AF022983-5|AAK82915.1|   79|Caenorhabditis elegans Hypothetical
           protein R13D11.10 protein.
          Length = 79

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = -3

Query: 737 RGGXXLXXXRDXGGXGGXXEXGEXRXEGXGXXXWGGGR 624
           RGG      R  GG GG    G     G G   WG GR
Sbjct: 42  RGGYGGYGYRPYGGYGGWGGRGMGGWGGRGMGGWGWGR 79


>AL117204-23|CAB55137.1|  285|Caenorhabditis elegans Hypothetical
           protein Y116A8C.35 protein.
          Length = 285

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 20/60 (33%), Positives = 21/60 (35%)
 Frame = -2

Query: 807 GXGGGXGXGRXXXTXXXDX*XVXAXGXXAXXXEGXRGGGGXG*AX*GXGGGXXRXXXGGG 628
           G GGG G G    +           G       G  GGGG G    G GGG      GGG
Sbjct: 216 GGGGGGGGGGGYGSGGG----WGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGG 271


>L25598-4|AAV58888.1|  737|Caenorhabditis elegans Calpain family
           protein 1, isoform b protein.
          Length = 737

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = -2

Query: 732 GXXAXXXEGXRGGGGXG*AX*GXGGGXXRXXXGGG 628
           G  A    G  GGGG G    G GGG      GGG
Sbjct: 44  GGLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGG 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,984,858
Number of Sequences: 27780
Number of extensions: 118947
Number of successful extensions: 742
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)