Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_C15
         (812 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    77   2e-16
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    54   2e-09
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    42   5e-06
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    42   5e-06
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   4.4  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   5.9  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   5.9  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   5.9  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   5.9  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 77.0 bits (181), Expect = 2e-16
 Identities = 39/116 (33%), Positives = 71/116 (61%)
 Frame = -2

Query: 508 EEMWLDCADKLTAMIQNIIEFAKLIPGFMKLTQDDQILLLKSGSFELAIVRLSRLIDVNR 329
           +E+  D + + +  I+ ++EFAK IPGF  L QDDQ+ LLK+G FE+ +VRL+ + D   
Sbjct: 232 QELLQDFSKRFSPAIRGVVEFAKRIPGFSLLAQDDQVTLLKAGVFEVLLVRLACMFDAQT 291

Query: 328 DQVLYGDVVLPVRECVHARDPRDVALVQGIFEAAKSIARLKLTETELALYQSLVLL 161
           + ++  +  +  RE +H        L+  +F+ A+ +  L+L++ EL L+ S+V++
Sbjct: 292 NSMICLNGQVLKRESIH-NSSNARFLMDSMFDFAERVNSLRLSDAELGLFCSVVVI 346


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 53.6 bits (123), Expect = 2e-09
 Identities = 27/101 (26%), Positives = 57/101 (56%)
 Frame = -2

Query: 466 IQNIIEFAKLIPGFMKLTQDDQILLLKSGSFELAIVRLSRLIDVNRDQVLYGDVVLPVRE 287
           +Q I+EF+K +PGF +L ++DQI LLK+ S E+ ++R++R  DV  D +++ +     ++
Sbjct: 386 VQLIVEFSKRLPGFDELMREDQIALLKACSSEVMMLRMARKYDVQTDSIIFANNQPYTKD 445

Query: 286 CVHARDPRDVALVQGIFEAAKSIARLKLTETELALYQSLVL 164
                   +   ++ +    + +  +K+   E AL  ++V+
Sbjct: 446 SYTVAGMGET--IEDLLHFCRQMYAMKVNNAEYALLTAIVI 484


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 42.3 bits (95), Expect = 5e-06
 Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
 Frame = -2

Query: 511 YEEMWLDCADKLTAMIQNIIEFAKLIPGFMKLTQDDQILLLKSGSFELAIVRLS-RLIDV 335
           YE       +     +  ++ +AK IP F  L  +DQ+LLL++G  EL I   S R IDV
Sbjct: 227 YENAVSHICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSIDV 286

Query: 334 NRDQVLYGDVVLPVRECVHARDPRDVALVQGIF-----EAAKSIARLKLTETELALYQSL 170
                    +VL     VH R+    A V  IF     E    +  +K+  TEL   +S+
Sbjct: 287 K------DGIVLATGITVH-RNSAQQAGVGTIFDRVLSELVSKMREMKMDRTELGCLRSI 339

Query: 169 VLLWP 155
           +L  P
Sbjct: 340 ILFNP 344


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 42.3 bits (95), Expect = 5e-06
 Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
 Frame = -2

Query: 511 YEEMWLDCADKLTAMIQNIIEFAKLIPGFMKLTQDDQILLLKSGSFELAIVRLS-RLIDV 335
           YE       +     +  ++ +AK IP F  L  +DQ+LLL++G  EL I   S R IDV
Sbjct: 227 YENAVSHICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSIDV 286

Query: 334 NRDQVLYGDVVLPVRECVHARDPRDVALVQGIF-----EAAKSIARLKLTETELALYQSL 170
                    +VL     VH R+    A V  IF     E    +  +K+  TEL   +S+
Sbjct: 287 K------DGIVLATGITVH-RNSAQQAGVGTIFDRVLSELVSKMREMKMDRTELGCLRSI 339

Query: 169 VLLWP 155
           +L  P
Sbjct: 340 ILFNP 344


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 506 GDVVGLRRQAHRDDP 462
           GD+ GLR++ H+ +P
Sbjct: 130 GDIAGLRKKKHKVNP 144


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 5/29 (17%)
 Frame = +2

Query: 101 YPPRGIR-----SQYSYNDFVLTWPQEHK 172
           YPP  I      S Y++ND  +T P+E K
Sbjct: 367 YPPASILMRKAISDYTFNDTKITIPKEMK 395


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 565 SHVCNPASDLYSRAPL 612
           SH+C PA  + S++PL
Sbjct: 44  SHLCLPAPRINSKSPL 59


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 565 SHVCNPASDLYSRAPL 612
           SH+C PA  + S++PL
Sbjct: 44  SHLCLPAPRINSKSPL 59


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 584 LRICIRVRLCQTFHXHLAN 640
           LR+CI+++L Q    +L N
Sbjct: 54  LRVCIKLKLSQLIDVNLKN 72


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 584 LRICIRVRLCQTFHXHLAN 640
           LR+CI+++L Q    +L N
Sbjct: 54  LRVCIKLKLSQLIDVNLKN 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,663
Number of Sequences: 438
Number of extensions: 4112
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)