Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_C05
(887 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 31 4.2
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 31 4.2
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 31 4.2
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 31 4.2
AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein pr... 31 4.2
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 31 4.2
AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein. 31 4.2
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 31 7.4
>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/89 (24%), Positives = 25/89 (28%)
Frame = +1
Query: 442 PVXPXPXAAXXXXPXXTYRNXXXSPXVVVXXPXXXFXXPXXXTXXXXNXXXPXPPXPAPX 621
PV P P A P P VV F P P PP P P
Sbjct: 665 PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPF 724
Query: 622 AXAXXPXXXXXPXXIXXXPPSXVXAPPLS 708
P + PP + PP+S
Sbjct: 725 LRPGFNPMHLPPGFLPPGPPPPI-TPPVS 752
>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/89 (24%), Positives = 25/89 (28%)
Frame = +1
Query: 442 PVXPXPXAAXXXXPXXTYRNXXXSPXVVVXXPXXXFXXPXXXTXXXXNXXXPXPPXPAPX 621
PV P P A P P VV F P P PP P P
Sbjct: 665 PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPF 724
Query: 622 AXAXXPXXXXXPXXIXXXPPSXVXAPPLS 708
P + PP + PP+S
Sbjct: 725 LRPGFNPMHLPPGFLPPGPPPPI-TPPVS 752
>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1146
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/89 (24%), Positives = 25/89 (28%)
Frame = +1
Query: 442 PVXPXPXAAXXXXPXXTYRNXXXSPXVVVXXPXXXFXXPXXXTXXXXNXXXPXPPXPAPX 621
PV P P A P P VV F P P PP P P
Sbjct: 665 PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPF 724
Query: 622 AXAXXPXXXXXPXXIXXXPPSXVXAPPLS 708
P + PP + PP+S
Sbjct: 725 LRPGFNPMHLPPGFLPPGPPPPI-TPPVS 752
>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/89 (24%), Positives = 25/89 (28%)
Frame = +1
Query: 442 PVXPXPXAAXXXXPXXTYRNXXXSPXVVVXXPXXXFXXPXXXTXXXXNXXXPXPPXPAPX 621
PV P P A P P VV F P P PP P P
Sbjct: 665 PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPF 724
Query: 622 AXAXXPXXXXXPXXIXXXPPSXVXAPPLS 708
P + PP + PP+S
Sbjct: 725 LRPGFNPMHLPPGFLPPGPPPPI-TPPVS 752
>AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein
protein.
Length = 667
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/89 (24%), Positives = 25/89 (28%)
Frame = +1
Query: 442 PVXPXPXAAXXXXPXXTYRNXXXSPXVVVXXPXXXFXXPXXXTXXXXNXXXPXPPXPAPX 621
PV P P A P P VV F P P PP P P
Sbjct: 476 PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPF 535
Query: 622 AXAXXPXXXXXPXXIXXXPPSXVXAPPLS 708
P + PP + PP+S
Sbjct: 536 LRPGFNPMHLPPGFLPPGPPPPI-TPPVS 563
>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR
protein rA4 protein.
Length = 1157
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/89 (24%), Positives = 25/89 (28%)
Frame = +1
Query: 442 PVXPXPXAAXXXXPXXTYRNXXXSPXVVVXXPXXXFXXPXXXTXXXXNXXXPXPPXPAPX 621
PV P P A P P VV F P P PP P P
Sbjct: 675 PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPF 734
Query: 622 AXAXXPXXXXXPXXIXXXPPSXVXAPPLS 708
P + PP + PP+S
Sbjct: 735 LRPGFNPMHLPPGFLPPGPPPPI-TPPVS 762
>AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein.
Length = 929
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/89 (24%), Positives = 25/89 (28%)
Frame = +1
Query: 442 PVXPXPXAAXXXXPXXTYRNXXXSPXVVVXXPXXXFXXPXXXTXXXXNXXXPXPPXPAPX 621
PV P P A P P VV F P P PP P P
Sbjct: 469 PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPF 528
Query: 622 AXAXXPXXXXXPXXIXXXPPSXVXAPPLS 708
P + PP + PP+S
Sbjct: 529 LRPGFNPMHLPPGFLPPGPPPPI-TPPVS 556
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 30.7 bits (66), Expect = 7.4
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +1
Query: 595 PXPPXPAPXAXAXXPXXXXXPXXIXXXPPSXVXAPPLSXRSXXXXAPSPLPXP 753
P P PA + A P P PP + PPL R P PLP P
Sbjct: 941 PPPRAPALPSEARAPPPPPPPPPHPPLPPPPLPPPPLPLR-LPPLPPPPLPRP 992
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,284,526
Number of Sequences: 237096
Number of extensions: 888481
Number of successful extensions: 2306
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2237
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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