Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_B24
         (831 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-884|AAF52222.1|  299|Drosophila melanogaster CG14035-PA...    32   1.1  
AY119125-1|AAM50985.1|  553|Drosophila melanogaster RE28286p pro...    31   1.5  
AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-P...    31   1.5  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   7.8  

>AE014134-884|AAF52222.1|  299|Drosophila melanogaster CG14035-PA
           protein.
          Length = 299

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 675 PGSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAY-LTPSSLGMAKG 502
           P   NPR H P +P  +S    P +P+    AP   P +S   P  + ++P+ +   +G
Sbjct: 13  PRGWNPRAHNPASPSPSSFLYRPPSPW--TTAPSPPPIISGPRPYGHAMSPAPINQVRG 69


>AY119125-1|AAM50985.1|  553|Drosophila melanogaster RE28286p
           protein.
          Length = 553

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = -1

Query: 702 PPLXXRVHQPGS----SNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAY 535
           PP    V QP      S P    P +P+  SI++ P  PY    A G  PP+ S+ PSA 
Sbjct: 442 PPQRPSVQQPWKPVFYSPPTESAPASPNRPSITLLP--PYGSAPAEGYLPPVGSQ-PSA- 497

Query: 534 LTPSSLGM 511
           L+ SS G+
Sbjct: 498 LSASSAGI 505


>AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-PA
           protein.
          Length = 625

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = -1

Query: 702 PPLXXRVHQPGS----SNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAY 535
           PP    V QP      S P    P +P+  SI++ P  PY    A G  PP+ S+ PSA 
Sbjct: 514 PPQRPSVQQPWKPVFYSPPTESAPASPNRPSITLLP--PYGSAPAEGYLPPVGSQ-PSA- 569

Query: 534 LTPSSLGM 511
           L+ SS G+
Sbjct: 570 LSASSAGI 577


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 21/62 (33%), Positives = 27/62 (43%)
 Frame = -1

Query: 678 QPGSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGV 499
           Q  S+      PTTP  T  SI+P T   KE AP  +    +   +   TP   G  +G 
Sbjct: 402 QYASTKAACPAPTTPKTTVKSISPTTTTKKEVAPKKRSATPTARSTKAGTPVG-GTERGP 460

Query: 498 SP 493
           SP
Sbjct: 461 SP 462


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,948,541
Number of Sequences: 53049
Number of extensions: 759328
Number of successful extensions: 2351
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2349
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)