Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_B14
(763 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 31 0.24
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.96
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo... 28 1.7
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 23 2.8
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 2.9
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 27 2.9
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.9
SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr 2|||M... 27 3.9
SPAC644.17c |mrpl9||mitochondrial ribosomal protein subunit L9|S... 25 8.9
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 25 8.9
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 8.9
SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 8.9
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 30.7 bits (66), Expect = 0.24
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +3
Query: 378 TNLTSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 557
TN TS H T+ +RR+ H +RE KH H ++ P + R +RH
Sbjct: 7 TNRTSTHKFNETDRETNHSRRHRHHHSRHRE-----SKHGRHDRSERPSSREAGDR-SRH 60
Query: 558 ERTGRXILQV 587
ER + L+V
Sbjct: 61 ERFSKEPLEV 70
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 0.96
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 388 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTXASP-DTNA 564
P T+ T + PP+ P ++ TST T T + P T ++ +T+
Sbjct: 1643 PITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTST 1702
Query: 565 P 567
P
Sbjct: 1703 P 1703
Score = 25.4 bits (53), Expect = 8.9
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 9/68 (13%)
Frame = +1
Query: 373 PQQILPATTQTTILRVP-PLLHDVTPTLRKPT--------ANTCQARTSTHFTGKTCIRQ 525
P L ++ TTI P + + KPT ANT TST T T +
Sbjct: 321 PSVALSTSSTTTITNASTPAANTIISRSSKPTDTTNSISFANTTPENTSTQITSPTAVNS 380
Query: 526 RNPNTXAS 549
P T +S
Sbjct: 381 STPITSSS 388
>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
Pik3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 801
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 510 NLHPPAEPEHRRIARHERTG 569
NL PAE +HRR+ R +R G
Sbjct: 235 NLDSPAELKHRRLVRSQRNG 254
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 23.0 bits (47), Expect(2) = 2.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 180 RGAPISAVRAGGVISSFGGPVGRPPLPSRRSARFS 284
R P + V GG S P+ RPPLPS S+ S
Sbjct: 154 RPLPETPVSPGG---SLVHPLPRPPLPSSVSSHSS 185
Score = 22.2 bits (45), Expect(2) = 2.8
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 378 TNLTSHHANYNFTGSTSLTRRYS 446
++++SH + Y+ T STSL Y+
Sbjct: 178 SSVSSHSSPYSTTSSTSLYSLYN 200
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 27.1 bits (57), Expect = 2.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 356 TMQTSYRNKSYQPPRKLQFYGFHLSYTTLLPH*GSQPRTLVKHAQART 499
TM + ++K RKL+ HL + +L+ H QP +HAQ RT
Sbjct: 1356 TMLKTSQSKDSSSLRKLRATCLHLLFASLVAHKFDQP----QHAQTRT 1399
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 420 STSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHER 563
STS R+ E +E S H+H HR++ EP ++RH R
Sbjct: 128 STSPANRHRRKE---KERTRSNHRHGSHRRH-----EPYRTHLSRHHR 167
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.9
Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Frame = +3
Query: 261 SRRSARFSRTGWAATAEVSRPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTS-LTR 437
S+ S+ FS T ++++ S T + S P +++L+SH ++ + S++ ++
Sbjct: 362 SKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVSS 421
Query: 438 RYSHTEEANR--EHLSSTHKHALHRKNLHPPAEPEHRRIARH--ERTGRXILQVTTTSXV 605
+ H ++R H SS +L K + + + H ER+ ++ V T S
Sbjct: 422 AFYHNSTSSRSSSHSSSHSLSSLSSKPILTASSSSLLTSSSHTYERSTVYVVTVETVSSG 481
Query: 606 SIFXPTETCLLSCL 647
S +++ S L
Sbjct: 482 SSTYASQSTQTSIL 495
>SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 685
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 236 TRRPASVTVEAICPVLADWVGRDRGSLTSGYLCR 337
TR+ + + ++A+CPVL + VG LT L R
Sbjct: 362 TRKLSEIVLDALCPVLPELVG-GSADLTPSNLTR 394
>SPAC644.17c |mrpl9||mitochondrial ribosomal protein subunit
L9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 343 KTFYHHANFLPQQIL 387
+TF HHAN P++IL
Sbjct: 13 RTFAHHANLTPRKIL 27
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 445 PTLRKPTANTCQARTSTHFTGKTCIRQRNPNTXASPDTNA 564
P L +PT+ Q R GK + NP + SP + A
Sbjct: 219 PLLNRPTSFNRQTRIRRAPPGKLDLSNSNPTSPVSPSSMA 258
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +1
Query: 358 HANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPT--ANT 474
H N + P T T VPP H T T+ PT ANT
Sbjct: 114 HVNSTTTVVPPTTHVNTTTVVPPTTHVNTTTVVPPTTHANT 154
>SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 378 TNLTSHHANYNFTGSTSLTRRYSHTEEAN 464
++ S H N N +++R+YS+T++ N
Sbjct: 83 SSFLSDHNNNNLFSDDTISRQYSNTDDIN 111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,887,432
Number of Sequences: 5004
Number of extensions: 55671
Number of successful extensions: 202
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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