Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_B09
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35641-2|CAA84707.2| 389|Caenorhabditis elegans Hypothetical pr... 339 1e-93
AF269063-1|AAG36940.1| 389|Caenorhabditis elegans core1 UDP-gal... 339 1e-93
AC006742-8|ABB51175.1| 261|Caenorhabditis elegans Hypothetical ... 139 2e-33
AC006742-2|AAF60497.3| 261|Caenorhabditis elegans Hypothetical ... 139 2e-33
U64858-7|AAB18285.2| 340|Caenorhabditis elegans Hypothetical pr... 136 2e-32
AF039040-4|AAB94182.1| 368|Caenorhabditis elegans Hypothetical ... 127 1e-29
AF024490-1|AAB70308.1| 334|Caenorhabditis elegans Hypothetical ... 117 1e-26
AF016654-5|AAB66027.1| 348|Caenorhabditis elegans Hypothetical ... 115 3e-26
Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical p... 103 2e-22
Z81492-10|CAB04029.2| 322|Caenorhabditis elegans Hypothetical p... 101 5e-22
AF003383-1|AAB54234.1| 379|Caenorhabditis elegans Hypothetical ... 62 5e-10
Z81131-6|CAE17977.2| 734|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AY241925-2|AAO85273.1| 734|Caenorhabditis elegans chondroitin d... 47 2e-05
AY241925-1|AAO85274.1| 736|Caenorhabditis elegans chondroitin d... 47 2e-05
AB088397-1|BAC76780.1| 726|Caenorhabditis elegans chondroitin s... 47 2e-05
Z93785-5|CAB07861.3| 321|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81131-5|CAB03422.2| 608|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AB088398-1|BAC76781.1| 715|Caenorhabditis elegans chondroitin s... 46 2e-05
Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein. 31 1.3
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 30 1.7
AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical ... 30 1.7
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 30 1.7
Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue... 30 2.2
U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeas... 30 2.2
U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeas... 30 2.2
U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeas... 30 2.2
U00032-9|AAA50631.1| 229|Caenorhabditis elegans Hypothetical pr... 30 2.2
U13070-6|AAC46643.1| 470|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical p... 28 9.0
Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical pr... 28 9.0
>Z35641-2|CAA84707.2| 389|Caenorhabditis elegans Hypothetical
protein C38H2.2 protein.
Length = 389
Score = 339 bits (833), Expect = 1e-93
Identities = 147/229 (64%), Positives = 178/229 (77%), Gaps = 1/229 (0%)
Frame = -2
Query: 801 HVKATWGXRXNKLLFMSSVEDSNLPSVKLPVQEGRDYLWAKTKAAFRYVYEHHRREADWF 622
HVKATW R NK +FMSS ED+ LP++ L V EGRDYLWAKTK AF+Y+Y+HH + DWF
Sbjct: 123 HVKATWAKRCNKYVFMSSEEDAELPAINLNVSEGRDYLWAKTKGAFKYIYDHHLNDYDWF 182
Query: 621 LKADDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQFVN 442
LKADDDTYVV+ENLR+ML +S ++P++FGC+FKPFT GY SGGAGYVLSREAL +F+
Sbjct: 183 LKADDDTYVVMENLRFMLLAHSPDEPIHFGCKFKPFTQGGYHSGGAGYVLSREALKKFIE 242
Query: 441 KALPSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPFVPQDHLFP-NKDK 265
ALP LC + GAEDAE+GKCL +GVKA DSRD+ RF PFVP+ HL P + D
Sbjct: 243 VALPDKSLCSQNHGGAEDAEMGKCLEKVGVKAGDSRDADGHHRFMPFVPEHHLSPGHVDP 302
Query: 264 GFWYWGYIYYPSDEGLDCCSDHAVTFHYVNPQQMYVFDYLIYHLRPYGI 118
FW+W Y YYP D+G CCSD+AV+FHYVNP MYV +YLIYHL+P+GI
Sbjct: 303 KFWFWQYTYYPMDQGPTCCSDYAVSFHYVNPNLMYVLEYLIYHLKPFGI 351
>AF269063-1|AAG36940.1| 389|Caenorhabditis elegans core1
UDP-galactose:N-acetylgalactosamine-alpha-R beta
1,3-galactosyltransferase protein.
Length = 389
Score = 339 bits (833), Expect = 1e-93
Identities = 147/229 (64%), Positives = 178/229 (77%), Gaps = 1/229 (0%)
Frame = -2
Query: 801 HVKATWGXRXNKLLFMSSVEDSNLPSVKLPVQEGRDYLWAKTKAAFRYVYEHHRREADWF 622
HVKATW R NK +FMSS ED+ LP++ L V EGRDYLWAKTK AF+Y+Y+HH + DWF
Sbjct: 123 HVKATWAKRCNKYVFMSSEEDAELPAINLNVSEGRDYLWAKTKGAFKYIYDHHLNDYDWF 182
Query: 621 LKADDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQFVN 442
LKADDDTYVV+ENLR+ML +S ++P++FGC+FKPFT GY SGGAGYVLSREAL +F+
Sbjct: 183 LKADDDTYVVMENLRFMLLAHSPDEPIHFGCKFKPFTQGGYHSGGAGYVLSREALKKFIE 242
Query: 441 KALPSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPFVPQDHLFP-NKDK 265
ALP LC + GAEDAE+GKCL +GVKA DSRD+ RF PFVP+ HL P + D
Sbjct: 243 VALPDKSLCSQNHGGAEDAEMGKCLEKVGVKAGDSRDADGHHRFMPFVPEHHLSPGHVDP 302
Query: 264 GFWYWGYIYYPSDEGLDCCSDHAVTFHYVNPQQMYVFDYLIYHLRPYGI 118
FW+W Y YYP D+G CCSD+AV+FHYVNP MYV +YLIYHL+P+GI
Sbjct: 303 KFWFWQYTYYPMDQGPTCCSDYAVSFHYVNPNLMYVLEYLIYHLKPFGI 351
>AC006742-8|ABB51175.1| 261|Caenorhabditis elegans Hypothetical
protein Y38C1AB.1 protein.
Length = 261
Score = 139 bits (336), Expect = 2e-33
Identities = 72/220 (32%), Positives = 119/220 (54%), Gaps = 1/220 (0%)
Frame = -2
Query: 789 TWGXRXNKLLFMS-SVEDSNLPSVKLPVQEGRDYLWAKTKAAFRYVYEHHRREADWFLKA 613
TW + LF + S + ++P + P+ RD+ W K + F+YV + ++ DW+ +A
Sbjct: 43 TWVQHCDDFLFFTDSKMNDSIPHIYYPLLNSRDHSWEKIRRVFKYVRDKITKKYDWYYRA 102
Query: 612 DDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQFVNKAL 433
DDDTY ++ N+R +L +YS Y G ++ FTP+G+ + G+ Y+LSR ++ F N+ +
Sbjct: 103 DDDTYALMHNMRTLLDNYSPTKHHYLGLQWNFFTPRGF-NDGSSYILSRPTMEAF-NEVM 160
Query: 432 PSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPFVPQDHLFPNKDKGFWY 253
P C ED E+ KCL ++ + D RD M R F P + L KD +
Sbjct: 161 LDPDRCPDHHRAEEDQELAKCLAHMEIYPEDIRDEMGSERIQHFHPLEQLTIYKDT--FN 218
Query: 252 WGYIYYPSDEGLDCCSDHAVTFHYVNPQQMYVFDYLIYHL 133
YYP+ + + SD ++FH+V+P +M + DY+ Y L
Sbjct: 219 RRLAYYPAMKEDENFSDKMISFHHVSPYEMRLMDYIFYRL 258
>AC006742-2|AAF60497.3| 261|Caenorhabditis elegans Hypothetical
protein Y38C1AB.5 protein.
Length = 261
Score = 139 bits (336), Expect = 2e-33
Identities = 72/220 (32%), Positives = 119/220 (54%), Gaps = 1/220 (0%)
Frame = -2
Query: 789 TWGXRXNKLLFMS-SVEDSNLPSVKLPVQEGRDYLWAKTKAAFRYVYEHHRREADWFLKA 613
TW + LF + S + ++P + P+ RD+ W K + F+YV + ++ DW+ +A
Sbjct: 43 TWVQHCDDFLFFTDSKMNDSIPHIYYPLLNSRDHSWEKIRRVFKYVRDKITKKYDWYYRA 102
Query: 612 DDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQFVNKAL 433
DDDTY ++ N+R +L +YS Y G ++ FTP+G+ + G+ Y+LSR ++ F N+ +
Sbjct: 103 DDDTYALMHNMRTLLDNYSPTKHHYLGLQWNFFTPRGF-NDGSSYILSRPTMEAF-NEVM 160
Query: 432 PSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPFVPQDHLFPNKDKGFWY 253
P C ED E+ KCL ++ + D RD M R F P + L KD +
Sbjct: 161 LDPDRCPDHHRAEEDQELAKCLAHMEIYPEDIRDEMGSERIQHFHPLEQLTIYKDT--FN 218
Query: 252 WGYIYYPSDEGLDCCSDHAVTFHYVNPQQMYVFDYLIYHL 133
YYP+ + + SD ++FH+V+P +M + DY+ Y L
Sbjct: 219 RRLAYYPAMKEDENFSDKMISFHHVSPYEMRLMDYIFYRL 258
>U64858-7|AAB18285.2| 340|Caenorhabditis elegans Hypothetical
protein C16D9.6 protein.
Length = 340
Score = 136 bits (328), Expect = 2e-32
Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 4/224 (1%)
Frame = -2
Query: 798 VKATWGXRXNK-LLFMSS-VEDSNLPSVKLPVQEGRDY--LWAKTKAAFRYVYEHHRREA 631
+ TW R + LF S D+ +P + DY L+ K++ AF ++Y + E
Sbjct: 116 INETWIHRCDHGQLFTSERFNDTRIPYSTVFKGIPDDYYNLFFKSRYAFHHIYTNISSEF 175
Query: 630 DWFLKADDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQ 451
DW+LKADDDT+V+VENLR L+ + ++P Y G KP+ GY +GGAGY+LSR AL
Sbjct: 176 DWYLKADDDTFVIVENLRSFLSTLNPDEPHYLGYVLKPYLKNGYNAGGAGYILSRAALKI 235
Query: 450 FVNKALPSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPFVPQDHLFPNK 271
F + + LC D ED I +CL N G+ D+R+S+ + RF F P D K
Sbjct: 236 FSEQLYSNATLC--PDDIYEDVGIARCLANAGMYPEDTRNSLGQNRFNTFSPSDTFHQTK 293
Query: 270 DKGFWYWGYIYYPSDEGLDCCSDHAVTFHYVNPQQMYVFDYLIY 139
W + + ++G + ++ ++FH ++P ++ +FD L+Y
Sbjct: 294 AGIDW----VKFKENKGYEAFANDLISFHKLSPDEIRLFDILLY 333
>AF039040-4|AAB94182.1| 368|Caenorhabditis elegans Hypothetical
protein T22B11.2 protein.
Length = 368
Score = 127 bits (306), Expect = 1e-29
Identities = 65/191 (34%), Positives = 103/191 (53%), Gaps = 5/191 (2%)
Frame = -2
Query: 690 LWAKTKAAFRYVYEHHRREADWFLKADDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFT 511
L+ KT+ A Y+Y++ ++ DW+ K DDDTY++VENL+ LA N P + G R T
Sbjct: 157 LFWKTRLALLYIYKYVSKDFDWYFKGDDDTYLIVENLQRYLATLDPNKPYFIGYRLSRRT 216
Query: 510 PQGYMSGGAGYVLSREALDQFVNKALPSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRD 331
GY +GG+GYV+SREA+ F K C H ED I +CL ++G+ +DSRD
Sbjct: 217 ETGYNAGGSGYVMSREAMRIFAEKLFNDKQKCPY--HEWEDYAIAQCLASVGIVPLDSRD 274
Query: 330 SMRRGRFFPFVPQDHLFPNKDKGF-----WYWGYIYYPSDEGLDCCSDHAVTFHYVNPQQ 166
R RF P+ P+ H + + + F WG Y ++ ++ H+++P +
Sbjct: 275 EKGRQRFLPWRPEQHFYADLTRSFQMDPIQVWGPAIY---------HENLISMHHLHPDE 325
Query: 165 MYVFDYLIYHL 133
+ + D L+Y +
Sbjct: 326 IRLIDGLLYSI 336
>AF024490-1|AAB70308.1| 334|Caenorhabditis elegans Hypothetical
protein C02H6.1 protein.
Length = 334
Score = 117 bits (281), Expect = 1e-26
Identities = 70/222 (31%), Positives = 114/222 (51%), Gaps = 4/222 (1%)
Frame = -2
Query: 792 ATWGXRXN--KLLFMSSVEDSNLP--SVKLPVQEGRDYLWAKTKAAFRYVYEHHRREADW 625
+TW R + + + + D +P +V +++ L+ KT +F Y Y + ++ DW
Sbjct: 107 STWLPRCDNGRFFLKTPLVDEKIPFSTVYRNLEDSYYDLFRKTLLSFYYSYTYISKDFDW 166
Query: 624 FLKADDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQFV 445
+LKADDD Y ++++L+ L ++ P++ G R KPF GY SGGAGY+LS A+ FV
Sbjct: 167 YLKADDDNYFMIDHLKEYLDTLDASKPLFLGYRMKPFLEGGYNSGGAGYLLSNAAVRIFV 226
Query: 444 NKALPSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPFVPQDHLFPNKDK 265
C AED I +CL ++G+ D+RD+ RF PF P + P +
Sbjct: 227 EHLYHDEKRCPYD--WAEDRGIARCLASMGILPSDTRDNDGSCRFLPFRPSE--MPGIPE 282
Query: 264 GFWYWGYIYYPSDEGLDCCSDHAVTFHYVNPQQMYVFDYLIY 139
Y YYP G S+ ++ H ++P++M D ++Y
Sbjct: 283 -----AYHYYPLKNG-SFVSEKFISLHRISPRKMIFLDSILY 318
>AF016654-5|AAB66027.1| 348|Caenorhabditis elegans Hypothetical
protein C17A2.3 protein.
Length = 348
Score = 115 bits (277), Expect = 3e-26
Identities = 73/225 (32%), Positives = 111/225 (49%), Gaps = 5/225 (2%)
Frame = -2
Query: 798 VKATWGXRXNKLLFMSSVE----DSNLPSVKLPVQEGRDYLWAKTKAAFRYVYEHHRREA 631
V +TW R + F + D +V +++ D L+ K+ + Y Y +
Sbjct: 120 VASTWLPRCDHGRFFTKTHLPYPDIAYSTVYRNLRDTYDDLFRKSIFSLYYSYTSISKHF 179
Query: 630 DWFLKADDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQ 451
DW+LK DDDT+V +++LR L + +P+Y G R PF GY SGG+GY+LS A+
Sbjct: 180 DWYLKTDDDTFVAMDHLREYLNTLNPAEPLYLGYRLAPFMNNGYNSGGSGYILSNAAMRM 239
Query: 450 FVNKALPSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPFVPQD-HLFPN 274
FV + + LC D G ED +G+CL ++G+ D+RD RF PF P + + +
Sbjct: 240 FVEQLYHNVRLC-PYDRG-EDRGMGRCLESVGITPSDTRDDQELNRFMPFRPAEIPIIGS 297
Query: 273 KDKGFWYWGYIYYPSDEGLDCCSDHAVTFHYVNPQQMYVFDYLIY 139
K W++ + YP S VT H V P+ M D +Y
Sbjct: 298 K----WHYFPLKYP------FISKKFVTLHRVPPEMMISLDKSLY 332
>Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical
protein F56H6.1 protein.
Length = 327
Score = 113 bits (271), Expect = 2e-25
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 4/218 (1%)
Frame = -2
Query: 798 VKATWGXRXNKLLFMSS--VEDSNLP--SVKLPVQEGRDYLWAKTKAAFRYVYEHHRREA 631
+ +TW + + F + + +SN+ +V L +++ L+ KT F Y Y H +
Sbjct: 98 IASTWLPKCDNGRFFTKTPLPNSNMTYSTVYLNLKDSYYDLFRKTTFGFYYSYMHISKSF 157
Query: 630 DWFLKADDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQ 451
DW+LKADDDTY +++L+ L+ P+Y G KP+ GY SGG+GY+LS A+
Sbjct: 158 DWYLKADDDTYFAMDHLKEYLSTLDPTKPLYLGYVLKPYFKNGYNSGGSGYILSNAAVKL 217
Query: 450 FVNKALPSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPFVPQDHLFPNK 271
FV K + C AED +G+C+ G+ D+RD RF PF P +
Sbjct: 218 FVEKLYHDEYTCPYD--WAEDRGMGRCMARAGIFPTDTRDDKGLNRFMPFKPSELAGVGP 275
Query: 270 DKGFWYWGYIYYPSDEGLDCCSDHAVTFHYVNPQQMYV 157
+ W+ YYP + G S V+ H + PQ M +
Sbjct: 276 E---WH----YYPMEAG-QYASQKFVSLHRL-PQDMMI 304
>Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical
protein T09E11.12 protein.
Length = 323
Score = 103 bits (246), Expect = 2e-22
Identities = 70/224 (31%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Frame = -2
Query: 798 VKATWGXRXNKLLFMSSVEDSNL----PSVKLPVQEGRDYLWAKTKAAFRYVYEHHRREA 631
+ +TW R + F S NL +V +++ L+ K+ F Y Y H +
Sbjct: 98 IASTWLRRCDNGRFFSKTPLLNLNITYSTVYKNLEDSYSDLFRKSIFGFYYSYVHISKSF 157
Query: 630 DWFLKADDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQ 451
DW+LKADDDTY +++LR L + P+Y G + GY SGG+GY+LS A+
Sbjct: 158 DWYLKADDDTYFAMDHLREYLNTLDPSKPLYLGYK------NGYNSGGSGYILSNAAVKL 211
Query: 450 FVNKALPSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPFVPQDHLFPNK 271
FV K+ + C AED IG+CL +G+ D+RD F PF P +
Sbjct: 212 FVEKSYHDEYGCPYD--WAEDHGIGRCLARVGIYPTDTRDDKGLNSFVPFKPSELAEFGP 269
Query: 270 DKGFWYWGYIYYPSDEGLDCCSDHAVTFHYVNPQQMYVFDYLIY 139
D W+ +YP+ + S V+ H + P M V D +++
Sbjct: 270 D---WH----FYPA---VQFASQKFVSLHRLPPAMMLVLDEILH 303
>Z81492-10|CAB04029.2| 322|Caenorhabditis elegans Hypothetical
protein E03H4.3 protein.
Length = 322
Score = 101 bits (243), Expect = 5e-22
Identities = 60/174 (34%), Positives = 87/174 (50%), Gaps = 4/174 (2%)
Frame = -2
Query: 798 VKATWGXRXNKLLFMSS--VEDSNLP--SVKLPVQEGRDYLWAKTKAAFRYVYEHHRREA 631
+ ATW R + F S + +N+ +V +++ L+ K+ F Y Y H
Sbjct: 98 IAATWLRRCDNGRFFSKTPLPSANMTYSTVYKNLEDSFFDLFRKSIFGFYYSYMHISNSF 157
Query: 630 DWFLKADDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQ 451
DW+LKADDDTY +++LR L + P+Y G K GY SGGAGY+LS A+
Sbjct: 158 DWYLKADDDTYFAMDHLREYLNTLDPSKPLYLGYVIKSGLKNGYNSGGAGYILSNAAVKI 217
Query: 450 FVNKALPSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPFVPQD 289
FV K + C AED +G+CL +G+ D+RD RF P+ P +
Sbjct: 218 FVEKLYHDEYGCPYD--WAEDRGMGRCLARVGIYPTDTRDDKGFNRFMPYRPSE 269
>AF003383-1|AAB54234.1| 379|Caenorhabditis elegans Hypothetical
protein ZC250.2 protein.
Length = 379
Score = 62.1 bits (144), Expect = 5e-10
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Frame = -2
Query: 798 VKATWGXRXNKLLFMSSVEDSNLPSVKLPVQEGRDYLWAKTKAAFRYVYEHHRREADWFL 619
+K TW +++ + S ED +P++ L V AKT FR A W +
Sbjct: 175 LKNTWASDVSRIEYCSDKEDPAIPTINLGVDNTDRGHCAKTWEIFRRFLGSSGNGAKWLV 234
Query: 618 KADDDTYVVVENLRYMLADYSSNDPVYFGCRF-KPFTPQG-----YMSGGAGYVLSREAL 457
ADDDT + + L+ ML Y S D + G R+ F+ G Y +GG+G + +R A+
Sbjct: 235 VADDDTLMNFKRLKQMLELYDSGDKIIIGERYGYGFSLNGDSGYDYPTGGSGMIFTRSAV 294
Query: 456 DQFVNKALPSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPFVPQDHLFP 277
+ + + PS C A+ +D IG C G+ + + + R + P+ +P
Sbjct: 295 ESLLAQC-PS---CIANT-DPDDMTIGICALTAGIPIV-HESRLHQARPLDYAPEYIKYP 348
>Z81131-6|CAE17977.2| 734|Caenorhabditis elegans Hypothetical
protein T24D1.1b protein.
Length = 734
Score = 46.8 bits (106), Expect = 2e-05
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Frame = -2
Query: 765 LLFMSSVEDSNLPSVKLPVQEGRDYLWAKTKAAF---RYVYEHHRREADWFLKADDDTYV 595
L+F++ +S + L +G D + K +F +++ E+ E DWFL+ADDD Y+
Sbjct: 113 LIFVAEGTESVHEDMPLIRLKGVDDTYPPQKKSFAMVKWLAENMADEYDWFLRADDDLYI 172
Query: 594 VVENLRYMLADYSSNDPVYFGCR----------FKPFTPQGYMSGGAGYVLSREALDQFV 445
E L L S+ G + Y GG G V+SR+ L +
Sbjct: 173 RGEELALFLRSVDSSKAHIIGQAGLGNSAEYGLLALGSTDNYCMGGPGIVMSRDTLLKV- 231
Query: 444 NKALPSPHLCKASDH---GAEDAEIGKCLH-NIGV 352
SPHL H ED E+G+C+ ++GV
Sbjct: 232 -----SPHLESCLQHMLTSHEDVELGRCIRKHVGV 261
>AY241925-2|AAO85273.1| 734|Caenorhabditis elegans chondroitin
disaccharide polymerase protein.
Length = 734
Score = 46.8 bits (106), Expect = 2e-05
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Frame = -2
Query: 765 LLFMSSVEDSNLPSVKLPVQEGRDYLWAKTKAAF---RYVYEHHRREADWFLKADDDTYV 595
L+F++ +S + L +G D + K +F +++ E+ E DWFL+ADDD Y+
Sbjct: 113 LIFVAEGTESVHEDMPLIRLKGVDDTYPPQKKSFAMVKWLAENMADEYDWFLRADDDLYI 172
Query: 594 VVENLRYMLADYSSNDPVYFGCR----------FKPFTPQGYMSGGAGYVLSREALDQFV 445
E L L S+ G + Y GG G V+SR+ L +
Sbjct: 173 RGEELALFLRSVDSSKAHIIGQAGLGNSAEYGLLALGSTDNYCMGGPGIVMSRDTLLKV- 231
Query: 444 NKALPSPHLCKASDH---GAEDAEIGKCLH-NIGV 352
SPHL H ED E+G+C+ ++GV
Sbjct: 232 -----SPHLESCLQHMLTSHEDVELGRCIRKHVGV 261
>AY241925-1|AAO85274.1| 736|Caenorhabditis elegans chondroitin
disaccharide polymerase protein.
Length = 736
Score = 46.8 bits (106), Expect = 2e-05
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Frame = -2
Query: 765 LLFMSSVEDSNLPSVKLPVQEGRDYLWAKTKAAF---RYVYEHHRREADWFLKADDDTYV 595
L+F++ +S + L +G D + K +F +++ E+ E DWFL+ADDD Y+
Sbjct: 115 LIFVAEGTESVHEDMPLIRLKGVDDTYPPQKKSFAMVKWLAENMADEYDWFLRADDDLYI 174
Query: 594 VVENLRYMLADYSSNDPVYFGCR----------FKPFTPQGYMSGGAGYVLSREALDQFV 445
E L L S+ G + Y GG G V+SR+ L +
Sbjct: 175 RGEELALFLRSVDSSKAHIIGQAGLGNSAEYGLLALGSTDNYCMGGPGIVMSRDTLLKV- 233
Query: 444 NKALPSPHLCKASDH---GAEDAEIGKCLH-NIGV 352
SPHL H ED E+G+C+ ++GV
Sbjct: 234 -----SPHLESCLQHMLTSHEDVELGRCIRKHVGV 263
>AB088397-1|BAC76780.1| 726|Caenorhabditis elegans chondroitin
synthase protein.
Length = 726
Score = 46.8 bits (106), Expect = 2e-05
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Frame = -2
Query: 765 LLFMSSVEDSNLPSVKLPVQEGRDYLWAKTKAAF---RYVYEHHRREADWFLKADDDTYV 595
L+F++ +S + L +G D + K +F +++ E+ E DWFL+ADDD Y+
Sbjct: 105 LIFVAEGTESVHEDMPLIRLKGVDDTYPPQKKSFAMVKWLAENMADEYDWFLRADDDLYI 164
Query: 594 VVENLRYMLADYSSNDPVYFGCR----------FKPFTPQGYMSGGAGYVLSREALDQFV 445
E L L S+ G + Y GG G V+SR+ L +
Sbjct: 165 RGEELALFLRSVDSSKAHIIGQAGLGNSAEYGLLALGSTDNYCMGGPGIVMSRDTLLKV- 223
Query: 444 NKALPSPHLCKASDH---GAEDAEIGKCLH-NIGV 352
SPHL H ED E+G+C+ ++GV
Sbjct: 224 -----SPHLESCLQHMLTSHEDVELGRCIRKHVGV 253
>Z93785-5|CAB07861.3| 321|Caenorhabditis elegans Hypothetical
protein W09D10.5 protein.
Length = 321
Score = 46.4 bits (105), Expect = 2e-05
Identities = 46/171 (26%), Positives = 67/171 (39%), Gaps = 9/171 (5%)
Frame = -2
Query: 633 ADWFLKADDDTYVVVENLRYMLADYSSNDPVYFG------CRFK---PFTPQGYMSGGAG 481
A W DD TY++V NLR L ++ S PV G F P + +S G
Sbjct: 144 AQWTFLGDDQTYLIVPNLRNTLRNFDSEKPVVLGKVKDTSTLFSWLFPLSSFKKISVRGG 203
Query: 480 YVLSREALDQFVNKALPSPHLCKASDHGAEDAEIGKCLHNIGVKAMDSRDSMRRGRFFPF 301
VLS A+D+ A +ASD D C GV+ D D F
Sbjct: 204 VVLSNPAIDKL--SACKGFFFSRASDFALYD-----CSEKYGVQIADPFDEDALRLFNDL 256
Query: 300 VPQDHLFPNKDKGFWYWGYIYYPSDEGLDCCSDHAVTFHYVNPQQMYVFDY 148
P+ + P+ ++ S CSDHA++F ++ + M V +
Sbjct: 257 PPKQIIAPDSK--------LFRSSPTKAGKCSDHAISFGQLSEKDMRVLQF 299
>Z81131-5|CAB03422.2| 608|Caenorhabditis elegans Hypothetical
protein T24D1.1a protein.
Length = 608
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Frame = -2
Query: 681 KTKAAFRYVYEHHRREADWFLKADDDTYVVVENLRYMLADYSSNDPVYFGCR-------- 526
K+ A +++ E+ E DWFL+ADDD Y+ E L L S+ G
Sbjct: 18 KSFAMVKWLAENMADEYDWFLRADDDLYIRGEELALFLRSVDSSKAHIIGQAGLGNSAEY 77
Query: 525 --FKPFTPQGYMSGGAGYVLSREALDQFVNKALPSPHLCKASDH---GAEDAEIGKCLH- 364
+ Y GG G V+SR+ L + SPHL H ED E+G+C+
Sbjct: 78 GLLALGSTDNYCMGGPGIVMSRDTLLKV------SPHLESCLQHMLTSHEDVELGRCIRK 131
Query: 363 NIGV 352
++GV
Sbjct: 132 HVGV 135
>AB088398-1|BAC76781.1| 715|Caenorhabditis elegans chondroitin
synthase-S protein.
Length = 715
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Frame = -2
Query: 681 KTKAAFRYVYEHHRREADWFLKADDDTYVVVENLRYMLADYSSNDPVYFGCR-------- 526
K+ A +++ E+ E DWFL+ADDD Y+ E L L S+ G
Sbjct: 125 KSFAMVKWLAENMADEYDWFLRADDDLYIRGEELALFLRSVDSSKAHIIGQAGLGNSAEY 184
Query: 525 --FKPFTPQGYMSGGAGYVLSREALDQFVNKALPSPHLCKASDH---GAEDAEIGKCLH- 364
+ Y GG G V+SR+ L + SPHL H ED E+G+C+
Sbjct: 185 GLLALGSTDNYCMGGPGIVMSRDTLLKV------SPHLESCLQHMLTSHEDVELGRCIRK 238
Query: 363 NIGV 352
++GV
Sbjct: 239 HVGV 242
>Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 433 QRLVHELVQRLPAEHVARAAAHVPLGRKRLEPASEVHRIVA-TVVSQHVPQIFDDNISIV 609
Q+++ + + +P +A AAH ++L P+ + + A T + H PQ + S V
Sbjct: 48 QQILSQAIPIIPEHQLAAVAAHHQ-HHQQLHPSVQYQLVAAATHHNHHQPQAAQPHYSAV 106
Query: 610 VGFQEPVRLPPVMFVH 657
V + ++ PP +H
Sbjct: 107 VPRSDVIQQPPHFALH 122
>Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 433 QRLVHELVQRLPAEHVARAAAHVPLGRKRLEPASEVHRIVA-TVVSQHVPQIFDDNISIV 609
Q+++ + + +P +A AAH ++L P+ + + A T + H PQ + S V
Sbjct: 48 QQILSQAIPIIPEHQLAAVAAHHQ-HHQQLHPSVQYQLVAAATHHNHHQPQAAQPHYSAV 106
Query: 610 VGFQEPVRLPPVMFVH 657
V + ++ PP +H
Sbjct: 107 VPRSDVIQQPPHFALH 122
>Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical
protein W06F12.1a protein.
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 433 QRLVHELVQRLPAEHVARAAAHVPLGRKRLEPASEVHRIVA-TVVSQHVPQIFDDNISIV 609
Q+++ + + +P +A AAH ++L P+ + + A T + H PQ + S V
Sbjct: 81 QQILSQAIPIIPEHQLAAVAAHHQ-HHQQLHPSVQYQLVAAATHHNHHQPQAAQPHYSAV 139
Query: 610 VGFQEPVRLPPVMFVH 657
V + ++ PP +H
Sbjct: 140 VPRSDVIQQPPHFALH 155
>AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein.
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 433 QRLVHELVQRLPAEHVARAAAHVPLGRKRLEPASEVHRIVA-TVVSQHVPQIFDDNISIV 609
Q+++ + + +P +A AAH ++L P+ + + A T + H PQ + S V
Sbjct: 81 QQILSQAIPIIPEHQLAAVAAHHQ-HHQQLHPSVQYQLVAAATHHNHHQPQAAQPHYSAV 139
Query: 610 VGFQEPVRLPPVMFVH 657
V + ++ PP +H
Sbjct: 140 VPRSDVIQQPPHFALH 155
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = -2
Query: 630 DWFLKADDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQ 451
DWFL A D TY+ L M+ + N+PV G + G G +LS+ A+
Sbjct: 180 DWFLLAKDSTYINPFVLLRMIDTMNWNEPVVMGEAAE--DGSGRCRLDTGMLLSQPAMHA 237
Query: 450 FVNKALPSPHLCKASD 403
+N + A+D
Sbjct: 238 LMNNRNACNNFALAAD 253
>AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical
protein Y41G9A.6 protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 561 YSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSR-EALDQFVNKALP 430
+ S + RF P+TP + + G+G V ++ AL Q++ A P
Sbjct: 108 FDSTTSISSKLRFSPYTPMPFRNNGSGNVCTQPNALHQYLQPAAP 152
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = -2
Query: 630 DWFLKADDDTYVVVENLRYMLADYSSNDPVYFGCRFKPFTPQGYMSGGAGYVLSREALDQ 451
DWFL A D TY+ L M+ + N+PV G + G G +LS+ A+
Sbjct: 180 DWFLLAKDSTYINPFVLLRMIDTMNWNEPVVMGEAAE--DGSGRCRLDTGMLLSQPAMHA 237
Query: 450 FVNKALPSPHLCKASD 403
+N + A+D
Sbjct: 238 LMNNRNACNNFALAAD 253
>Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue
protein.
Length = 897
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 124 VRPKVVYEIVEHVHLLRVDVVERHGVVGTTIQALV--AGVVDVAPVPEALVLVREQVVLR 297
V+ K E V+HV ++ RH V + +L+ AG+ D+A P+ + EQ +
Sbjct: 801 VKSKQFLEFVQHVDSA-YRILRRHSNVLLNLFSLMLDAGIPDIAAEPDKAIFKIEQRLRL 859
Query: 298 DEREEPAPPH 327
D +E A H
Sbjct: 860 DLSDEAATKH 869
>U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform b
protein.
Length = 650
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 124 VRPKVVYEIVEHVHLLRVDVVERHGVVGTTIQALV--AGVVDVAPVPEALVLVREQVVLR 297
V+ K E V+HV ++ RH V + +L+ AG+ D+A P+ + EQ +
Sbjct: 554 VKSKQFLEFVQHVDSA-YRILRRHSNVLLNLFSLMLDAGIPDIAAEPDKAIFKIEQRLRL 612
Query: 298 DEREEPAPPH 327
D +E A H
Sbjct: 613 DLSDEAATKH 622
>U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform c
protein.
Length = 897
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 124 VRPKVVYEIVEHVHLLRVDVVERHGVVGTTIQALV--AGVVDVAPVPEALVLVREQVVLR 297
V+ K E V+HV ++ RH V + +L+ AG+ D+A P+ + EQ +
Sbjct: 801 VKSKQFLEFVQHVDSA-YRILRRHSNVLLNLFSLMLDAGIPDIAAEPDKAIFKIEQRLRL 859
Query: 298 DEREEPAPPH 327
D +E A H
Sbjct: 860 DLSDEAATKH 869
>U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform a
protein.
Length = 901
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 124 VRPKVVYEIVEHVHLLRVDVVERHGVVGTTIQALV--AGVVDVAPVPEALVLVREQVVLR 297
V+ K E V+HV ++ RH V + +L+ AG+ D+A P+ + EQ +
Sbjct: 805 VKSKQFLEFVQHVDSA-YRILRRHSNVLLNLFSLMLDAGIPDIAAEPDKAIFKIEQRLRL 863
Query: 298 DEREEPAPPH 327
D +E A H
Sbjct: 864 DLSDEAATKH 873
>U00032-9|AAA50631.1| 229|Caenorhabditis elegans Hypothetical
protein F37A4.3 protein.
Length = 229
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 639 READWFLKADDDTYVVVENLRYMLADYSSNDPVY 538
++A W++ A D+ Y VE L L+ + S+ P+Y
Sbjct: 104 QQAQWYMFAFDNNYFFVERLIKELSKFDSHLPIY 137
>U13070-6|AAC46643.1| 470|Caenorhabditis elegans Hypothetical
protein F01F1.9 protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 403 VAGLAQMRGGQRLVHELVQ-RLPAEHVARAAAHVPLGRKRLEPASE 537
VAGL ++ G++L H+L+ + P + A H+ R +P +E
Sbjct: 134 VAGLVIVKNGEKLQHKLIDVKKPVLFIPNLAIHLETDRTTFKPNTE 179
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 364 QHRGEGDGLPRLYEAGPVLPVRPAGPPVP 278
Q R + GLP + P PV P GPP P
Sbjct: 80 QKRQDFSGLPAWCQCEPAKPVCPPGPPGP 108
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 597 HKYRRRL--SGTSPPPSGDVRTRI*RRLSSSPTSNLDL 704
HK+ + S ++PPP+ D R ++ +RL P+S +++
Sbjct: 221 HKFGGEIKRSSSTPPPTSDEREQVEQRLLLRPSSGMEI 258
>Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 318 GRFFPFVPQDHLFPNKDKGFWYWGYIYYPSDEGL 217
G F F + +FPN +K W+ +YYP+D +
Sbjct: 947 GERFHFRGSNVVFPNGNKDPWHALGLYYPTDSSV 980
>Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical protein
F23B2.12 protein.
Length = 1080
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 318 GRFFPFVPQDHLFPNKDKGFWYWGYIYYPSDEGL 217
G F F + +FPN +K W+ +YYP+D +
Sbjct: 947 GERFHFRGSNVVFPNGNKDPWHALGLYYPTDSSV 980
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,292,487
Number of Sequences: 27780
Number of extensions: 389217
Number of successful extensions: 1398
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1382
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -