Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_B07
(930 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0610 - 25449085-25453284 33 0.43
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.57
03_01_0515 - 3864796-3865425 32 0.57
12_02_1174 - 26696869-26698191 32 0.75
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 31 0.99
04_03_0904 + 20717005-20718087 31 1.3
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 31 1.7
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 30 2.3
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 2.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 3.0
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 30 3.0
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 30 3.0
04_03_0902 + 20707834-20708187 29 4.0
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 4.0
12_02_0299 - 17051570-17052474,17053542-17053755 29 5.3
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.3
07_03_1433 + 26513728-26514135,26525534-26526280 29 5.3
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 29 5.3
03_05_0587 - 25878948-25879201,25879290-25879361,25881091-25881451 29 5.3
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.3
09_02_0603 - 11150739-11150746,11150791-11151340 28 9.2
07_01_0753 - 5799733-5799741,5799938-5800642 28 9.2
04_01_0034 - 401208-402923 28 9.2
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 28 9.2
01_01_0070 - 542603-542686,542803-543441 28 9.2
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 32.7 bits (71), Expect = 0.43
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +3
Query: 612 PPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRP--XXSPPPXXXRXSPXPQQ 773
PPP P P+ S P PP T P SPPP SP P++
Sbjct: 799 PPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTPPSPVKSSSPPPEAHVSSPPPEK 854
Score = 32.7 bits (71), Expect = 0.43
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +3
Query: 573 PXXLSXXPISXXXPPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXR 752
P S P + PP +P P S P PP A P SPPP
Sbjct: 1115 PTEKSLPPPATVSLPPPTVKPLPPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPV 1174
Query: 753 XSPXP 767
SP P
Sbjct: 1175 ISPPP 1179
Score = 31.5 bits (68), Expect = 0.99
Identities = 23/78 (29%), Positives = 26/78 (33%)
Frame = +3
Query: 594 PISXXXPPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXPQQ 773
P PPP P P+ S P PP A P SPPP SP P +
Sbjct: 1187 PAPVILPPPPVKSPPPPAPVISPPPPVKSPPPP-APVILPPPPVKSPPPPAPVISPPPPE 1245
Query: 774 CDLRSXXPXLLVXSAXXS 827
P +L A S
Sbjct: 1246 KSPPPAAPVILSPPAVKS 1263
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 594 PISXXXPPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXP 767
P PPP P P+ S P PP A P SPPP SP P
Sbjct: 1155 PAPVILPPPPIKSPPPPAPVISPPPPVKSPPPP-APVILPPPPVKSPPPPAPVISPPP 1211
Score = 28.3 bits (60), Expect = 9.2
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 6/71 (8%)
Frame = +3
Query: 573 PXXLSXXPISXXXPPPXXFRPXXP--SXXXSXPXXXPPXX----PPHAFRXTSXRPXXSP 734
P L PI PP P P S P PP PP A + P SP
Sbjct: 1157 PVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSP 1216
Query: 735 PPXXXRXSPXP 767
PP P P
Sbjct: 1217 PPPAPVILPPP 1227
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.57
Identities = 25/98 (25%), Positives = 27/98 (27%)
Frame = +3
Query: 474 PFXARXLXAPXXPXPLXXXXXXXXPXSXXXTXHPXXLSXXPISXXXPPPXXFRPXXPSXX 653
P A P P P P P L + PPP P P+
Sbjct: 539 PTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCL 598
Query: 654 XSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXP 767
P PP PP S P PPP S P
Sbjct: 599 --VPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLP 634
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 612 PPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXP 767
PPP P P+ P PP P H+ P PP R P P
Sbjct: 603 PPPPPPPPILPNRSVPPPPPPPPPLPNHSV-LPPPPPPPPPPSLPNRLVPPP 653
>03_01_0515 - 3864796-3865425
Length = 209
Score = 32.3 bits (70), Expect = 0.57
Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 6/80 (7%)
Frame = +3
Query: 546 PXSXXXTXHPXXLSXXPISXXXPPPXXFRPXXP------SXXXSXPXXXPPXXPPHAFRX 707
P S P L+ P PPP P P S S P P PP
Sbjct: 39 PPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAAS 98
Query: 708 TSXRPXXSPPPXXXRXSPXP 767
P PPP + SP P
Sbjct: 99 PPPPPPSPPPPSPVKSSPPP 118
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.9 bits (69), Expect = 0.75
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +3
Query: 612 PPPXXFRPXXPSXXXSXPXXXPPXXP-PHAFRXTSXRPXXSPPPXXXRXSPXP 767
PPP +P PS P PP P P + + +P PPP SP P
Sbjct: 141 PPPVKPQPP-PSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPP 192
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 612 PPPXXFRPXXP-SXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXP 767
PP +P P S P PP PP + + +P PPP SP P
Sbjct: 172 PPVVQPKPQPPPSLQPPSPPPPPPTRPP-SVKPPVVQPKPQPPPTLPPPSPPP 223
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 31.5 bits (68), Expect = 0.99
Identities = 18/71 (25%), Positives = 21/71 (29%)
Frame = +3
Query: 585 SXXPISXXXPPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPX 764
S P PP RP P P P PP + +P S PP P
Sbjct: 216 SKPPAYAPAKPPTALRPAIPPAAMPKPPSVAPVQPPQRPPAPATKPPPSFPPQLAPTMPP 275
Query: 765 PQQCDLRSXXP 797
P + P
Sbjct: 276 PAHAPAETPAP 286
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/65 (26%), Positives = 23/65 (35%)
Frame = +3
Query: 573 PXXLSXXPISXXXPPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXR 752
P + P PPP +P P+ + P P PP T +P P P
Sbjct: 80 PTPPTYTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKPTPPT-YKPQPKPTPAPYT 138
Query: 753 XSPXP 767
+P P
Sbjct: 139 PTPTP 143
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 663 PXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSP 761
P PP PP F T+ +P PPP P
Sbjct: 329 PAPPPPPPPPSRFNNTTPKPPPPPPPPEPPTGP 361
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/64 (28%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = +3
Query: 585 SXXPISXXXPP-PXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSP 761
S P PP P P PS P PP PP PPP P
Sbjct: 201 STLPPPPPPPPLPASSEPVDPSAASLPPLPPPPPPPPKPANIAGAPGLPLPPPPPPPPGP 260
Query: 762 XPQQ 773
P++
Sbjct: 261 PPRE 264
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/66 (27%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +3
Query: 573 PXXLSXXPISXXXPPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPP-PXXX 749
P L ++ PPP P P P PP P S P +PP P
Sbjct: 59 PPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPPPP 118
Query: 750 RXSPXP 767
+P P
Sbjct: 119 APAPPP 124
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +3
Query: 594 PISXXXPP-PXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXP 767
P+ PP P P P S P PP PP + S P PPP P P
Sbjct: 1141 PLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLS---PSLPPPPPPPPLPSGPPPQP 1196
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/58 (34%), Positives = 23/58 (39%)
Frame = +3
Query: 615 PPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXPQQCDLRS 788
PP F+P + P PP PP S P +PPP R SP P L S
Sbjct: 20 PPKPFKPLSSAAPFRRPSPPPP--PP------SPVPSPAPPPPPHRPSPSPPPNPLSS 69
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +3
Query: 612 PPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXPQ 770
PPP RP P PP PPH R S P + P PQ
Sbjct: 15 PPPFSSRPRVVGPPPPPPSDPPPPPPPHHHHHHRRRHRHSKKP---KPQPQPQ 64
>04_03_0902 + 20707834-20708187
Length = 117
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +3
Query: 657 SXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXPQ 770
S P PP H T P +PPP SP P+
Sbjct: 43 SHPDKPPPYRNSHTKTNTPRTPLYAPPPPLPHTSPTPE 80
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +3
Query: 612 PPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPP 740
PPP P P + P PP PP + + P + PP
Sbjct: 354 PPPPPPPPPPPPKLNTAPKPPPPPPPPPSVPSNNNLPKPAEPP 396
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +3
Query: 594 PISXXXPPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPP 740
PI PPP P P P PP PP AF +PPP
Sbjct: 228 PIPFLTPPPP---PFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPP 273
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 5.3
Identities = 24/98 (24%), Positives = 28/98 (28%)
Frame = +3
Query: 474 PFXARXLXAPXXPXPLXXXXXXXXPXSXXXTXHPXXLSXXPISXXXPPPXXFRPXXPSXX 653
PF A P P P P P P PPP P +
Sbjct: 50 PFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPP----PQMYYQPPPPP-PPYGVNSS 104
Query: 654 XSXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXP 767
P PP PP + P PPP + +P P
Sbjct: 105 QPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPP 142
>07_03_1433 + 26513728-26514135,26525534-26526280
Length = 384
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 612 PPPXXFRPXXPSXXXSXPXXXPP--XXPPHAFRXTSXRPXXSPPPXXXRXSPXP 767
PP P PS S P PP PP + P PPP +P P
Sbjct: 28 PPTPITYPSPPSLSPSMPPTYPPPSSTPPSPAPVSPSPPTTYPPPSTTPPNPAP 81
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 618 PXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPP 740
P P P P PP PP R P SPPP
Sbjct: 206 PPMAAPAPPQTNPPRPVRPPPPPPPPRQRLLRPLPAESPPP 246
>03_05_0587 - 25878948-25879201,25879290-25879361,25881091-25881451
Length = 228
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 675 PPXXPPHAFRXTSX-RPXXSPPPXXXRXSPXPQQCD 779
PP PP AFR R PPP + SP PQQ D
Sbjct: 132 PP--PPVAFRRKPPAREAPPPPPAAEKLSPPPQQHD 165
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +3
Query: 594 PISXXXPPPXXFRPXXPSXXXSXPXXXPPXX-PPHAFRXTSXRPXXSPPPXXXRXSPXP 767
P + PPP + P P PP PP P PPP + P P
Sbjct: 321 PAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +3
Query: 612 PPPXXFRPXXPSXXXSXPXXX---PPXXPPHAFRXTSXRPXXSPPPXXXRXSPXPQ 770
PPP F P P P PP P +F + PPP P PQ
Sbjct: 38 PPPFGFPPPPPPGSTFVPLPQSGVPPPPPLGSFFVPPPQSRVPPPPPQLGVPPLPQ 93
>07_01_0753 - 5799733-5799741,5799938-5800642
Length = 237
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 642 PSXXXSXPXXXPPXXPPHAFRXTSXRPXXSPPP 740
PS P PP P +AF + P PPP
Sbjct: 17 PSAQLGQPLLPPPNQPYYAFPAAAYAPPPPPPP 49
>04_01_0034 - 401208-402923
Length = 571
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 663 PXXXPPXXPPHAFRXTSXRPXXSPPP--XXXRXSPXPQQC 776
P PP PP R RP PPP R + P +C
Sbjct: 303 PRPAPPPPPPQQQRAKPSRPPPPPPPLDPPPRAAAPPAKC 342
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 657 SXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXP 767
S P PP P AF P PPP P P
Sbjct: 413 SRPQSPPPPLPSDAFEQPPPPPEHPPPPESTSPPPPP 449
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.3 bits (60), Expect = 9.2
Identities = 22/97 (22%), Positives = 26/97 (26%), Gaps = 7/97 (7%)
Frame = +3
Query: 498 APXXPXPLXXXXXXXXPXSXXXTXHPXXLSXXPISXXXPPPXXFR-------PXXPSXXX 656
AP P P T P P++ PP P P
Sbjct: 32 APAQPTPTPVPTAPAKSPPAPATPAPTATPTPPVAPAKAPPVAPAVAPVTPPPPTPKKAP 91
Query: 657 SXPXXXPPXXPPHAFRXTSXRPXXSPPPXXXRXSPXP 767
P PP PP P +PPP +P P
Sbjct: 92 PPPVTPPPVTPPPVTPPPVSPPPATPPPALPPSTPPP 128
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 612 PPPXXFRPXXPSXXXSXPXXXPPXXPPHAFRXTSXRPXXSP 734
PPP P P P PP PP A ++ P +P
Sbjct: 92 PPPVTPPPVTPPPVTPPPVSPPPATPPPALPPSTPPPVAAP 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,165,167
Number of Sequences: 37544
Number of extensions: 154166
Number of successful extensions: 978
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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