Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_B06
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 36 0.021
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 36 0.021
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 32 0.33
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 0.58
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 2.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 2.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 2.4
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 29 3.1
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 3.1
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 4.1
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 4.1
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 29 4.1
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.2
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 28 7.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 7.2
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/77 (28%), Positives = 26/77 (33%)
Frame = +3
Query: 141 DPIRPXQNPXKXXTXIXX*XKPKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXX 320
+P RP Q P + T P+ G P PP G P G+ P G
Sbjct: 128 NPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKG 187
Query: 321 PXTPPNXSAXPXXPXPP 371
P PP P P P
Sbjct: 188 PPGPPGAPGAPGTPGEP 204
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/77 (28%), Positives = 26/77 (33%)
Frame = +3
Query: 141 DPIRPXQNPXKXXTXIXX*XKPKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXX 320
+P RP Q P + T P+ G P PP G P G+ P G
Sbjct: 128 NPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKG 187
Query: 321 PXTPPNXSAXPXXPXPP 371
P PP P P P
Sbjct: 188 PPGPPGAPGAPGTPGEP 204
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/71 (28%), Positives = 24/71 (33%)
Frame = +3
Query: 141 DPIRPXQNPXKXXTXIXX*XKPKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXX 320
+P RP Q P + T P+ G P PP G P G+ P G
Sbjct: 128 NPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKG 187
Query: 321 PXTPPNXSAXP 353
P PP P
Sbjct: 188 PKGPPGAPGAP 198
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 219 GXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPPNXSAXPXXPXPP 371
G P PP G P G PP G P PP P PP
Sbjct: 111 GPPGPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPP 161
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/77 (28%), Positives = 26/77 (33%), Gaps = 3/77 (3%)
Frame = +3
Query: 141 DPIRPXQNPXKXXTXIXX*XKPKXXXGXPKPPPXXW---GXGXPXF*KXXGKKXPPXNRG 311
+P RP Q P T P+ G P PP G G P G+ P N+G
Sbjct: 128 NPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKG 187
Query: 312 GXXPXTPPNXSAXPXXP 362
P P P P
Sbjct: 188 PSGPNGNPGAPGAPGQP 204
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPPNXSAXPXXPXP 368
P G PPP G P G PP GG P PP A P P P
Sbjct: 67 PPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP-PPMFGAPPPPPPP 120
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPPN-XSAXPXXPXP 368
P G P PPP G P G PP G P PP+ P P P
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPPNXSAXPXXPXPP 371
P G P PPP G P G PP R G P PP + P PP
Sbjct: 265 PPPRTGSPPPPPT----GSPPPPPAGGSPPPP--RAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPPNXSAXPXXPXPP 371
P G P PPP G P G PP R G P PP + P PP
Sbjct: 286 PPPRTGSPPPPPT----GSPPPPPAGGSPPPP--RAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPPNXSAXPXXPXPP 371
P G P PPP G P G PP R G P PP + P PP
Sbjct: 271 PPPRTGSPPPPPT----GSPPPPPAGGSPPPP--RAGSPPPPPPPRGSPPTGSLPP 320
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 5/69 (7%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRG-----GXXPXTPPNXSAXPXXPXP 368
P G P PPP G P G PP G G P PP P P P
Sbjct: 720 PPITGGPPPPPPPG---GLPPI--TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 369 PXXXXXXGG 395
P GG
Sbjct: 775 PPPGGFKGG 783
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPP----NXSAXPXXPXPP 371
P G P PPP G P G PP GG P PP P P PP
Sbjct: 736 PPITGGPPPPPP---PGGLPPI--SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +3
Query: 225 PKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPPNXSAXPXXPXPP 371
P PPP P PP G P P + P P PP
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 5/69 (7%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRG-----GXXPXTPPNXSAXPXXPXP 368
P G P PPP G P G PP G G P PP P P P
Sbjct: 720 PPITGGPPPPPPPG---GLPPI--TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 369 PXXXXXXGG 395
P GG
Sbjct: 775 PPPGGFKGG 783
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPP----NXSAXPXXPXPP 371
P G P PPP G P G PP GG P PP P P PP
Sbjct: 736 PPITGGPPPPPP---PGGLPPI--SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +3
Query: 225 PKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPPNXSAXPXXPXPP 371
P PPP P PP G P P + P P PP
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 5/69 (7%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRG-----GXXPXTPPNXSAXPXXPXP 368
P G P PPP G P G PP G G P PP P P P
Sbjct: 303 PPITGGPPPPPPPG---GLPPI--TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 369 PXXXXXXGG 395
P GG
Sbjct: 358 PPPGGFKGG 366
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPP----NXSAXPXXPXPP 371
P G P PPP G P G PP GG P PP P P PP
Sbjct: 319 PPITGGPPPPPP---PGGLPPI--SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +3
Query: 225 PKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPPNXSAXPXXPXPP 371
P PPP P PP G P P + P P PP
Sbjct: 267 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 315
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +1
Query: 220 GPPNPXXXXGGXGPXFFKXGXGKXAP-XKTGGGXXXXPP 333
GPP P G GP K G G P K G PP
Sbjct: 158 GPPGPQGMAGAKGPQGPKGGNGDNGPDGKAGANGMQGPP 196
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/77 (25%), Positives = 23/77 (29%)
Frame = +3
Query: 141 DPIRPXQNPXKXXTXIXX*XKPKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXX 320
+P RP Q P + T P+ G P PP G G P G
Sbjct: 133 NPGRPPQQPCEPITPPPCKPCPQGPAGPPGPPGPAGDAGSDGSPGAPGSDGQPGAAGDKG 192
Query: 321 PXTPPNXSAXPXXPXPP 371
P P P P P
Sbjct: 193 PAGPNGNPGAPGSPGKP 209
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = +3
Query: 141 DPIRPXQNPXKXXTXIXX*XKPKXXXGXPKPPPXXW---GXGXPXF*KXXGKKXPPXNRG 311
+P P Q P T P+ G P PP G G P G+ P N+G
Sbjct: 95 NPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKG 154
Query: 312 GXXPXTPPNXSAXPXXP 362
P P P P
Sbjct: 155 PSGPNGNPGAPGAPGQP 171
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 220 GPPNPXXXXGGXGPXFFKXGXGKXAPXKTGGGXXXXPPXXSPXXXGXPXXP 372
GPP P G G G AP G P SP G P P
Sbjct: 159 GPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGAPGEPGRP 209
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 223 PPNPXXXXGGXGPXFFKXGXGKXAPXKTGGGXXXXPPXXSPXXXGXP 363
PP P GG GP G +GGG P P G P
Sbjct: 176 PPGPAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAGNP 222
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/76 (26%), Positives = 22/76 (28%)
Frame = +3
Query: 144 PIRPXQNPXKXXTXIXX*XKPKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXP 323
P RP Q P + T P+ G P P G P G P G P
Sbjct: 119 PGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGP 178
Query: 324 XTPPNXSAXPXXPXPP 371
PP P P
Sbjct: 179 IGPPGPPGQAGAPGEP 194
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/77 (24%), Positives = 24/77 (31%)
Frame = +3
Query: 141 DPIRPXQNPXKXXTXIXX*XKPKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXX 320
+P RP + P + T P+ G PP G G + P G
Sbjct: 118 NPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKG 177
Query: 321 PXTPPNXSAXPXXPXPP 371
P PP P PP
Sbjct: 178 PAGPPGPGGKPGPAGPP 194
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +1
Query: 223 PPNPXXXXGGXGPXFFKXGXGKXAPXKTGGGXXXXPPXXSPXXXGXPXXPXXXG 384
PP P G GP G G +GG P P G P G
Sbjct: 170 PPGPAGPAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPG 223
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +3
Query: 204 PKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXXPXTPPNXSAXPXXPXPP 371
P G PP G P GK P PP S P P PP
Sbjct: 200 PNGEPGPKGPPGQPGADGQPGMPGEPGKDAPQEGSPVPGDPGPPGDSGIPGPPGPP 255
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/77 (24%), Positives = 24/77 (31%)
Frame = +3
Query: 141 DPIRPXQNPXKXXTXIXX*XKPKXXXGXPKPPPXXWGXGXPXF*KXXGKKXPPXNRGGXX 320
+P RP + P + T P+ G PP G G + P G
Sbjct: 120 NPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKG 179
Query: 321 PXTPPNXSAXPXXPXPP 371
P PP P PP
Sbjct: 180 PAGPPGPGGKPGPAGPP 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,606,475
Number of Sequences: 27780
Number of extensions: 135176
Number of successful extensions: 482
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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