Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_B04
(811 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor ho... 201 2e-51
AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor... 201 2e-51
U02609-1|AAA18945.1| 519|Homo sapiens transducin-like protein p... 32 2.8
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 3.7
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 31 3.7
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 31 3.7
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 31 4.9
>BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor
homolog (S. cerevisiae) protein.
Length = 586
Score = 201 bits (491), Expect = 2e-51
Identities = 86/147 (58%), Positives = 111/147 (75%)
Frame = -2
Query: 510 SGDTAQHAAAQLFAWEARAHGLDLHLLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYG 331
+GDT A QLFAWEA G ++HL A+PTKL++L +K ++ +K Q K+SILEKYG
Sbjct: 318 TGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYG 377
Query: 330 GEEHLQSVPRELLLAQTEVFTRYNRDGTLVSGAEKQLAKSKYEEDALINNHTTVWGSYWR 151
G+EHL + P ELLLAQTE + Y+R GT++ G E+ +A SKYEED I+NHT +WGSYW+
Sbjct: 378 GQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVACSKYEEDVKIHNHTHIWGSYWK 437
Query: 150 DGQWGYKCCHSFIKMSYCVGEAGKTVV 70
+G+WGYKCCHSF K SYC GEAGK +V
Sbjct: 438 EGRWGYKCCHSFFKYSYCTGEAGKEIV 464
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/50 (64%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Frame = -3
Query: 659 NLXIREDTAKYLRNXDPNSAXYDPKTRSMRDNPTPNV----PESEYGGEN 522
NL IRED AKYLRN DPNSA YDPKTR+MR+NP N E Y G+N
Sbjct: 264 NLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDN 313
>AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor
SLU7 protein.
Length = 586
Score = 201 bits (491), Expect = 2e-51
Identities = 86/147 (58%), Positives = 111/147 (75%)
Frame = -2
Query: 510 SGDTAQHAAAQLFAWEARAHGLDLHLLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYG 331
+GDT A QLFAWEA G ++HL A+PTKL++L +K ++ +K Q K+SILEKYG
Sbjct: 318 TGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYG 377
Query: 330 GEEHLQSVPRELLLAQTEVFTRYNRDGTLVSGAEKQLAKSKYEEDALINNHTTVWGSYWR 151
G+EHL + P ELLLAQTE + Y+R GT++ G E+ +A SKYEED I+NHT +WGSYW+
Sbjct: 378 GQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVACSKYEEDVKIHNHTHIWGSYWK 437
Query: 150 DGQWGYKCCHSFIKMSYCVGEAGKTVV 70
+G+WGYKCCHSF K SYC GEAGK +V
Sbjct: 438 EGRWGYKCCHSFFKYSYCTGEAGKEIV 464
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/50 (64%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Frame = -3
Query: 659 NLXIREDTAKYLRNXDPNSAXYDPKTRSMRDNPTPNV----PESEYGGEN 522
NL IRED AKYLRN DPNSA YDPKTR+MR+NP N E Y G+N
Sbjct: 264 NLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDN 313
>U02609-1|AAA18945.1| 519|Homo sapiens transducin-like protein
protein.
Length = 519
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -3
Query: 317 SSPYPGSCCWPRPK-CSPATTGTARSSAGQR 228
SS P + CWPRP+ +P+++G +R+SA R
Sbjct: 413 SSSLPWTRCWPRPQLMAPSSSGHSRTSAVSR 443
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3
Query: 323 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRSNLPR 213
+T S PG+ P+ SPATT TA SS S+ PR
Sbjct: 2884 ATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPR 2920
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3
Query: 323 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRSNLPR 213
+T S PG+ P+ SPATT TA SS S+ PR
Sbjct: 98 ATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPR 134
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3
Query: 323 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRSNLPR 213
+T S PG+ P+ SPATT TA SS S+ PR
Sbjct: 358 ATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPR 394
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 323 STSSPY-PGSCCWPRPKCSPATTGTARSSAGQRSNLPR 213
ST++P PG+ P+ SPATT TA SS S+ PR
Sbjct: 48 STATPSTPGTAPPPKVLTSPATTPTATSSKATSSSSPR 85
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,677,424
Number of Sequences: 237096
Number of extensions: 2105777
Number of successful extensions: 7204
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7202
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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