Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_B04
         (811 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   4.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   5.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.8  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 495 QHAAAQLFAWEARAHGLDLHLLAEPTKLQ 409
           QHAA  ++  +   HG  LH+ + P+ +Q
Sbjct: 797 QHAAQMIYGHQQSHHG--LHINSSPSSVQ 823


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 302 GSCCWPRPKCSPATT 258
           GSC WPR K    TT
Sbjct: 140 GSCYWPRGKNLGGTT 154


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 248 VPSLL*RV-NTSVWASSSSLGTDWRCS 325
           +P  + RV +T+VW + +  G + RC+
Sbjct: 80  IPLYVCRVLHTTVWVAGAQRGNEQRCT 106


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 657 PXYPGGHSQVPAEXGP 610
           P YPGG S  P+   P
Sbjct: 81  PSYPGGGSSSPSPSSP 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,589
Number of Sequences: 438
Number of extensions: 3715
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)