Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_T7_A09
         (797 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.        31   4.8  
AY061884-1|AAL32101.1| 1755|Homo sapiens ubiquitin ligase E3 alp...    31   4.8  
AL391814-3|CAI14738.1| 1755|Homo sapiens ubiquitin protein ligas...    31   4.8  
AL391814-2|CAI95298.1| 1755|Homo sapiens ubiquitin protein ligas...    31   4.8  
AL136223-3|CAI19920.1| 1755|Homo sapiens ubiquitin protein ligas...    31   4.8  
AL136223-2|CAI95666.1| 1755|Homo sapiens ubiquitin protein ligas...    31   4.8  
AL049843-4|CAI20399.1| 1755|Homo sapiens ubiquitin protein ligas...    31   4.8  
AL049843-3|CAI95685.1| 1755|Homo sapiens ubiquitin protein ligas...    31   4.8  
AK125795-1|BAC86295.1|  575|Homo sapiens protein ( Homo sapiens ...    31   4.8  
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi...    31   4.8  
AB002347-1|BAA20806.1| 1275|Homo sapiens KIAA0349 protein.             31   4.8  

>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
          Length = 3851

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -1

Query: 305 DGDSTSRTHNSQFNHPYGYQPPVQTADDIAAQPPPRSQADIDYELKVRKFLEMTKEDSDY 126
           D   +S    SQ  H Y           +  QPP R+    D +   R+ LEM+ E+ + 
Sbjct: 723 DTAESSDDFGSQLRHDYVEDSSEGGLSPLPPQPPARAAELTDEDFMRRQILEMSAEEDNL 782

Query: 125 EE 120
           EE
Sbjct: 783 EE 784


>AY061884-1|AAL32101.1| 1755|Homo sapiens ubiquitin ligase E3
           alpha-II protein.
          Length = 1755

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 713 LAIIPF-HEEAQNSLDFLKSKTTASKPLIEP-AELLLPGLTGAKSYEMKETLKQLLNL 546
           L+I P  H E   SL   ++K T  + +IE  A    PGLTG   YE+K    +  NL
Sbjct: 786 LSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNL 843


>AL391814-3|CAI14738.1| 1755|Homo sapiens ubiquitin protein ligase
           E3 component n-recognin 2 protein.
          Length = 1755

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 713 LAIIPF-HEEAQNSLDFLKSKTTASKPLIEP-AELLLPGLTGAKSYEMKETLKQLLNL 546
           L+I P  H E   SL   ++K T  + +IE  A    PGLTG   YE+K    +  NL
Sbjct: 786 LSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNL 843


>AL391814-2|CAI95298.1| 1755|Homo sapiens ubiquitin protein ligase
           E3 component n-recognin 2 protein.
          Length = 1755

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 713 LAIIPF-HEEAQNSLDFLKSKTTASKPLIEP-AELLLPGLTGAKSYEMKETLKQLLNL 546
           L+I P  H E   SL   ++K T  + +IE  A    PGLTG   YE+K    +  NL
Sbjct: 786 LSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNL 843


>AL136223-3|CAI19920.1| 1755|Homo sapiens ubiquitin protein ligase
           E3 component n-recognin 2 protein.
          Length = 1755

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 713 LAIIPF-HEEAQNSLDFLKSKTTASKPLIEP-AELLLPGLTGAKSYEMKETLKQLLNL 546
           L+I P  H E   SL   ++K T  + +IE  A    PGLTG   YE+K    +  NL
Sbjct: 786 LSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNL 843


>AL136223-2|CAI95666.1| 1755|Homo sapiens ubiquitin protein ligase
           E3 component n-recognin 2 protein.
          Length = 1755

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 713 LAIIPF-HEEAQNSLDFLKSKTTASKPLIEP-AELLLPGLTGAKSYEMKETLKQLLNL 546
           L+I P  H E   SL   ++K T  + +IE  A    PGLTG   YE+K    +  NL
Sbjct: 786 LSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNL 843


>AL049843-4|CAI20399.1| 1755|Homo sapiens ubiquitin protein ligase
           E3 component n-recognin 2 protein.
          Length = 1755

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 713 LAIIPF-HEEAQNSLDFLKSKTTASKPLIEP-AELLLPGLTGAKSYEMKETLKQLLNL 546
           L+I P  H E   SL   ++K T  + +IE  A    PGLTG   YE+K    +  NL
Sbjct: 786 LSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNL 843


>AL049843-3|CAI95685.1| 1755|Homo sapiens ubiquitin protein ligase
           E3 component n-recognin 2 protein.
          Length = 1755

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 713 LAIIPF-HEEAQNSLDFLKSKTTASKPLIEP-AELLLPGLTGAKSYEMKETLKQLLNL 546
           L+I P  H E   SL   ++K T  + +IE  A    PGLTG   YE+K    +  NL
Sbjct: 786 LSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNL 843


>AK125795-1|BAC86295.1|  575|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43807 fis, clone TESTI4001106, weakly  similar
           to Mus musculus ubiquitin protein ligase E3 component
           n-recognin 1. ).
          Length = 575

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 713 LAIIPF-HEEAQNSLDFLKSKTTASKPLIEP-AELLLPGLTGAKSYEMKETLKQLLNL 546
           L+I P  H E   SL   ++K T  + +IE  A    PGLTG   YE+K    +  NL
Sbjct: 290 LSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNL 347


>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc
           finger protein protein.
          Length = 3926

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -1

Query: 305 DGDSTSRTHNSQFNHPYGYQPPVQTADDIAAQPPPRSQADIDYELKVRKFLEMTKEDSDY 126
           D   +S    SQ  H Y           +  QPP R+    D +   R+ LEM+ E+ + 
Sbjct: 798 DTAESSDDFGSQLRHDYVEDSSEGGLSPLPPQPPARAAELTDEDFMRRQILEMSAEEDNL 857

Query: 125 EE 120
           EE
Sbjct: 858 EE 859


>AB002347-1|BAA20806.1| 1275|Homo sapiens KIAA0349 protein.
          Length = 1275

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 713 LAIIPF-HEEAQNSLDFLKSKTTASKPLIEP-AELLLPGLTGAKSYEMKETLKQLLNL 546
           L+I P  H E   SL   ++K T  + +IE  A    PGLTG   YE+K    +  NL
Sbjct: 306 LSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNL 363


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,236,436
Number of Sequences: 237096
Number of extensions: 1501141
Number of successful extensions: 4892
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4890
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)