BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_A02
(890 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U96114-1|AAC51325.1| 870|Homo sapiens WWP2 protein. 32 3.2
BC064531-1|AAH64531.1| 870|Homo sapiens WWP2 protein protein. 32 3.2
BC013645-1|AAH13645.1| 870|Homo sapiens WW domain containing E3... 32 3.2
BC000108-1|AAH00108.1| 335|Homo sapiens WW domain containing E3... 32 3.2
BC065495-1|AAH65495.1| 923|Homo sapiens KIAA1967 protein. 31 7.4
AB075847-1|BAB85553.1| 818|Homo sapiens KIAA1967 protein protein. 31 7.4
AL591545-1|CAI40663.1| 724|Homo sapiens RP11-419L10.1 protein. 30 9.8
AL162578-1|CAI40011.1| 724|Homo sapiens RP11-419L10.1 protein. 30 9.8
AL049820-1|CAI42304.1| 724|Homo sapiens RP11-419L10.1 protein. 30 9.8
>U96114-1|AAC51325.1| 870|Homo sapiens WWP2 protein.
Length = 870
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +3
Query: 33 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 212
+S+ P+ +T P PA A G G Q+LP AA PD A R+
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320
Query: 213 HGFGQCVEQRPLVP 254
H +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334
>BC064531-1|AAH64531.1| 870|Homo sapiens WWP2 protein protein.
Length = 870
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +3
Query: 33 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 212
+S+ P+ +T P PA A G G Q+LP AA PD A R+
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320
Query: 213 HGFGQCVEQRPLVP 254
H +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334
>BC013645-1|AAH13645.1| 870|Homo sapiens WW domain containing E3
ubiquitin protein ligase 2 protein.
Length = 870
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +3
Query: 33 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 212
+S+ P+ +T P PA A G G Q+LP AA PD A R+
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320
Query: 213 HGFGQCVEQRPLVP 254
H +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334
>BC000108-1|AAH00108.1| 335|Homo sapiens WW domain containing E3
ubiquitin protein ligase 2 protein.
Length = 335
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +3
Query: 33 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 212
+S+ P+ +T P PA A G G Q+LP AA PD A R+
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320
Query: 213 HGFGQCVEQRPLVP 254
H +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334
>BC065495-1|AAH65495.1| 923|Homo sapiens KIAA1967 protein.
Length = 923
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +2
Query: 716 DLPPYTPYRPFASMGRSCYDILESPL----ILVPNNSIDV-MGWXXEIPVSQPLSRH 871
DLPPY + ++ D LE +LVP++ + V + W P+SQP S H
Sbjct: 220 DLPPYRVHLTPYTVDSPICDFLELQRRYRSLLVPSDFLSVHLSWLSAFPLSQPFSLH 276
>AB075847-1|BAB85553.1| 818|Homo sapiens KIAA1967 protein protein.
Length = 818
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +2
Query: 716 DLPPYTPYRPFASMGRSCYDILESPL----ILVPNNSIDV-MGWXXEIPVSQPLSRH 871
DLPPY + ++ D LE +LVP++ + V + W P+SQP S H
Sbjct: 115 DLPPYRVHLTPYTVDSPICDFLELQRRYRSLLVPSDFLSVHLSWLSAFPLSQPFSLH 171
>AL591545-1|CAI40663.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 761 APLTQMXGRACTVGGLYKQSSFSEPSDR 678
+P+ QM RAC GG +++S+S P+ R
Sbjct: 640 SPVVQMEPRACDTGGSGRKASWSRPAPR 667
>AL162578-1|CAI40011.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 761 APLTQMXGRACTVGGLYKQSSFSEPSDR 678
+P+ QM RAC GG +++S+S P+ R
Sbjct: 640 SPVVQMEPRACDTGGSGRKASWSRPAPR 667
>AL049820-1|CAI42304.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 761 APLTQMXGRACTVGGLYKQSSFSEPSDR 678
+P+ QM RAC GG +++S+S P+ R
Sbjct: 640 SPVVQMEPRACDTGGSGRKASWSRPAPR 667
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,690,511
Number of Sequences: 237096
Number of extensions: 2930553
Number of successful extensions: 5726
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5726
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -